Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq9 87.8 2e-12 >seq9 Length=2205763 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/212 (69%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGA--TGTCGAATCGA 24889 |||||||| ||||| || ||| | || ||||| || || ||| | || |||||| | | Sbjct 1749553 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTGTCGAGCCCA 1749494 Query 24890 GCGACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACC 24949 | |||| | || | ||| || | ||||| | || || ||| | ||| ||||| Sbjct 1749493 GTGACACCATTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCGCCTGACC 1749434 Query 24950 AGCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACA 25009 |||| ||| | | | |||||||||||| ||||||||| | ||| || || || | Sbjct 1749433 AGCAGCGTCTGGTTTTTGCGGGCAAACAGCTGGAAGATGGCCGTACTCTGTCAGACTATA 1749374 Query 25010 GCATACAGAAAGAGGCCACGCTTCATTTAGTG 25041 || ||||||||| |||| || || || ||| Sbjct 1749373 ATATCCAGAAAGAGTCCACCCTGCACTTGGTG 1749342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418263867914240