Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq7870 120 3e-22
seq7767 98.7 9e-16
seq7782 93.3 4e-14
seq9 91.5 1e-13
seq7842 87.8 2e-12
seq7828 87.8 2e-12
seq7858 84.2 2e-11
seq7857 82.4 7e-11
>seq7870
Length=10551609
Score = 120 bits (132), Expect = 3e-22
Identities = 116/149 (78%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 23048 ACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTG 23107
||||| |||||| || |||||||| ||||| || || || ||||| || || |||||
Sbjct 10326698 ACCTCATCTTTGCTGGTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTT 10326639
Query 23108 CCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTG 23167
|||| || ||||||||| || ||||| || ||||| ||||||||||||||||| ||
Sbjct 10326638 CCCAGGTTCTGCTGGTTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGGGGTA 10326579
Query 23168 CCCGTCTCGACCTGCGACTCGATGATCGC 23196
|| ||||| ||| ||||| ||||| ||
Sbjct 10326578 CCTGTCTCTGTCTGAGACTCAATGATGGC 10326550
>seq7767
Length=50048226
Score = 98.7 bits (108), Expect = 9e-16
Identities = 151/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||||| || || || || || || || |||||| |||| ||||| ||
Sbjct 33066959 AAGATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGATCCC 33066900
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| || | | |||| || || | || ||| |||||||| | || || ||
Sbjct 33066899 TCGGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGAT 33066840
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTA 31368
|||||| | || || || |||||||| || ||||||| | | | ||| || || ||
Sbjct 33066839 CAGCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGA-TGGACGCACTTTGTCTGACTA 33066781
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGT 31401
||||||||||| || || ||||||||||| ||
Sbjct 33066780 CAACATTCAAAAGGAGTCTACTCTTCATCTTGT 33066748
>seq7782
Length=35566003
Score = 93.3 bits (102), Expect = 4e-14
Identities = 113/154 (73%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || ||||| ||||| ||||| | |||||| |||| ||||| ||
Sbjct 14262709 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGAACATCACCCTCGAGGTTGAGCCCAGT 14262650
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | |||||| | ||| |||||||| | | | ||||| ||||||
Sbjct 14262649 GACACCATTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGACATCCCGCCTGACCAG 14262590
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAG 31346
|||||||| || || || ||||||||| ||||||
Sbjct 14262589 CAGCGTCTGATTTTTGCGGGCAAACAGCTGGAAG 14262556
>seq9
Length=2205763
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTT--GAACCGT 31250
||||| || || || ||||| ||||| ||||| || |||||| | || || || ||
Sbjct 1749553 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTGTCGAGCCCA 1749494
Query 31251 CCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310
|||| | || | |||||| | ||| |||||||| ||| | ||||| ||||
Sbjct 1749493 GTGACACCATTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCGCCTGACC 1749434
Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370
|||||||||| | || || ||||||||| ||||||| ||| || || ||||
Sbjct 1749433 AGCAGCGTCTGGTTTTTGCGGGCAAACAGCTGGAAGATGGCCGTACTCTGTCAGACTATA 1749374
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
| || || ||||| || || || || |||| ||| | || |||| ||
Sbjct 1749373 ATATCCAGAAAGAGTCCACCCTGCACTTGGTGCTTCGCCTACGGGGTGG 1749325
>seq7842
Length=42459490
Score = 87.8 bits (96), Expect = 2e-12
Identities = 80/101 (79%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040
|| || || || || ||||| || |||||||| || |||||| ||||||| ||| |
Sbjct 7548345 GCTTTTGCTGCTGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCGTCAATATTCTGGCTC 7548404
Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGA 58081
|||||||||||||||||||| ||||| |||||| ||| ||
Sbjct 7548405 AAGAAACGCGGCCTGATGCCTGGCCTCACGTTTTCCAATGA 7548445
>seq7828
Length=21597463
Score = 87.8 bits (96), Expect = 2e-12
Identities = 154/222 (69%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||||| || || || || || || || ||||| |||| ||||||||
Sbjct 14213589 AAGATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACTCTCGAGGTTGAACCC 14213530
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| || | | |||| | || | || | | |||||||| | || || ||
Sbjct 14213529 TCGGATACAATAGAAAATATAAAGGCCAAGATTCAGAATAAGGAAGGAATTCCTCCTGAT 14213470
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGAC-TATGAGCGATTA 31368
|||||| | || || || |||||||| || ||||||| | | | | | || || ||
Sbjct 14213469 CAGCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGA-TGGACGTCCTTTGTCTGACTA 14213411
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
||||||||||| || || ||||||||||| || | |||||
Sbjct 14213410 CAACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACT 14213369
>seq7858
Length=29646629
Score = 84.2 bits (92), Expect = 2e-11
Identities = 153/219 (70%), Gaps = 4/219 (2%)
Strand=Plus/Minus
Query 31194 TGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCG 31253
|||| |||||| | || || || || || || || |||||| |||| |||||| || |
Sbjct 12424960 TGCAGATTTTCCTGAAAACCCTCACGGGGAAGACCATCACCCTCGAGCCTGAACCCTCGG 12424901
Query 31254 ACAGTGTCGAAACGGT-CAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
| | | |||| || || | ||| | ||| |||||||| | || || || |||
Sbjct 12424900 ATACAATAGAAAATGTACAGGCCAAGATTCA-GGATAAGGAAGGAATTCCTCCTGATCAG 12424842
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371
||| | || || | |||||||| || ||||| | | ||| ||| || || || ||
Sbjct 12424841 CAGAGACTGATCGTTGCTGGCAAGCAACTGGAAAA-TGGATGCACTTTGTCTGACTACAA 12424783
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
||||||||| || || ||||||||||| || | |||||
Sbjct 12424782 CATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACT 12424744
>seq7857
Length=43258702
Score = 82.4 bits (90), Expect = 7e-11
Identities = 153/222 (69%), Gaps = 2/222 (1%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||||| || ||||| | || || || ||||| |||| | ||||||
Sbjct 24177952 AAGATGCAGATTTTCGTGAAAACTCTTATGGGGAAGACCATCACTCTCGAGGCTGAACCC 24178011
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| || | | ||| || || | || ||| |||||||| | || || ||
Sbjct 24178012 TCGGATACAATACAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGAT 24178071
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTA 31368
|||||| | | || || |||||||| || ||||||| | | | ||| || || ||
Sbjct 24178072 CAGCAGAGATTGATCTTTGCTGGCAAGCAACTGGAAGA-TGGACGCACTCTGTCTGACTA 24178130
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
|||| |||||| || || ||||||||||| || | |||||
Sbjct 24178131 CAACACTCAAAAGGAGTCCACTCTTCATCTTGTGTTAAGACT 24178172
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445722536586240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |