Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq7767 95.1 2e-14
seq7842 84.2 4e-11
>seq7767
Length=50048226
Score = 95.1 bits (104), Expect = 2e-14
Identities = 293/449 (65%), Gaps = 12/449 (3%)
Strand=Plus/Plus
Query 101908 GGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATC 101967
||||| |||| | ||||||||| || ||||||||||||||| |||| | || || |
Sbjct 16036304 GGAACGGGTTGTGGACTTTGCTGCTGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCGAC 16036363
Query 101968 CATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCAT 102027
|| |||||| ||||||| | | | ||||||| | || | |||||||| | ||
Sbjct 16036364 GATATTCTGGCTCAAGAAACGTGACCTGATGCCTGGCCCCATGTTTTCCAATGAACTTAT 16036423
Query 102028 TTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGT 102087
| || || || ||| | || | |||||||| ||| || |||| ||| | | ||
Sbjct 16036424 TAGCAGAGATGAGGGTTTACACTGTGACTTTGCCTGCCTGATGTTCAAACA---CCTGGT 16036480
Query 102088 TGATACCCCAT-CAAG-AGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAA 102145
| | || | |||| ||| || | ||||| | | | | ||||| || || ||
Sbjct 16036481 CCACAAACCTTCCAAGCAGAGAG--TGAAGGAAATAATTATTAATGCCGTTCGGATAGAG 16036538
Query 102146 CAAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATG 102205
|| | || ||||| | || |||| | || | | || ||||| |||| ||| |||
Sbjct 16036539 CAGGGGTTCCTCACGGAGACCTTGCCCCTGAAGCTCATTGGGATGAATTGCACGTTAATG 16036598
Query 102206 AGCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCAC 102265
| |||| ||||| ||||||||| | ||| || | || | || | | |||
Sbjct 16036599 AAGCAGTGTATTGAGTTTGTGGCACACCGACTTATGCTGGAGCTAGGTTTTGGCAAGGTT 16036658
Query 102266 TATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAAC 102325
| | || || || || |||||||| |||||||| || | ||| |||
Sbjct 16036659 TTCAGAGTAGAAAATCCATTTGACTTCATGGAGAATATTTCACTGG-----AAGGGAAAC 16036713
Query 102326 TTTTTTGAAAAGAGAGTCGCCGAGTATCA 102354
|| ||||| |||||||| | ||||||||
Sbjct 16036714 TTCTTTGAGAAGAGAGTAGGTGAGTATCA 16036742
>seq7842
Length=42459490
Score = 84.2 bits (92), Expect = 4e-11
Identities = 82/106 (77%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975
|||| || |||||||| || ||||||||||||||| |||| | || || || || ||||
Sbjct 7548340 TTGTGGCTTTTGCTGCTGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCGTCAATATTCT 7548399
Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGA 102021
|| ||||||| | || | ||||||| ||||| | ||||||||
Sbjct 7548400 GGCTCAAGAAACGCGGCCTGATGCCTGGCCTCACGTTTTCCAATGA 7548445
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989484190557760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |