Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq7767 315 9e-81
seq7820 232 9e-56
seq7735 167 3e-36
seq7870 131 2e-25
seq7842 123 3e-23
seq7786 107 3e-18
>seq7767
Length=50048226
Score = 315 bits (348), Expect = 9e-81
Identities = 419/579 (72%), Gaps = 5/579 (1%)
Strand=Plus/Minus
Query 36143 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 36202
||||| ||||||| || || || || ||||||| |||||| ||||| ||||| | |||
Sbjct 16036474 TGTTTGAACATCAGGCAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCA 16036415
Query 36203 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 36262
||||||||| || | || ||||| ||| |||| || || ||||| ||||| | ||||||
Sbjct 16036414 TTGGAAAACATGGGGCCAGGCATCAGGTCACGTTTCTTGAGCCAGAATATCGTCGCAAAA 16036355
Query 36263 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---A 36319
|| ||||||||||| |||||||| || || |||||| | | || | || || || |
Sbjct 16036354 GAACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAGTCCACAACCCGTTCCCCGTAGGTA 16036295
Query 36320 CCGGCACTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATT 36379
| | |||| |||| | ||||| || |||||||| |||||||||||||||
Sbjct 16036294 GCCTCTTTGTCCCCAGTCCAATGCAAGGCCCAGTCTGCCTTCTTCTTTACACAAGGCATT 16036235
Query 36380 GTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATC 36439
||||| | || || |||||| | | |||| || |||||||||||| || |||||
Sbjct 16036234 GTCTCGAGGGCGTTGAAGAGAAATTCCCTTTCTTTGGAATCTTTAACATAAGTGTCAATG 16036175
Query 36440 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACAT 36499
| ||||| ||||| || ||||| |||||||| ||||| ||| | || || ||||||||
Sbjct 16036174 AGGAGACTGTACATCTCAGAATGGATGTTTTCCATGGCAATTCGGAAGCCATAGAAACAG 16036115
Query 36500 CTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATT 36559
| || || |||||||| |||||| | ||| || || | || |||||||| |||||
Sbjct 16036114 CGGGCTTCTGTAATCTGAACTTCTTGGCTAAACCGCTCCACCAAGTTTTCATTTACTATG 16036055
Query 36560 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTT 36619
|| ||||| | ||||| || |||| || || || ||| ||| | || | || |
Sbjct 16036054 CCATCACTCGGCGCAAAGAAAGCCAGAACGTGGGATAGAAAGTATCTCTCCTCAGGCTTC 16035995
Query 36620 AGTTTATTCC-AATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGA 36678
|| ||||| | | || || || || | |||||| ||||| |||||||||| ||
Sbjct 16035994 AG-GGATTCCTGGTGCTGAATGTCCTTGGAAAGATCCACCTCTTCAGCTGTCCAAAAGGA 16035936
Query 36679 TGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATA 36717
||||| || || | |||||| | ||| || ||||| ||
Sbjct 16035935 AGCCTCAGCTTTCTCATACATCTGCCAAATATCATGGTA 16035897
>seq7820
Length=31847680
Score = 232 bits (256), Expect = 9e-56
Identities = 419/607 (69%), Gaps = 12/607 (2%)
Strand=Plus/Minus
Query 36143 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 36202
||||| ||||||| || || || | | ||||| |||||| ||||| ||||| | ||
Sbjct 14843668 TGTTTGAACATCAGGCAGGCAAAGTTGTGGTGTAAACCCTCATCTCTGCTAATAAGCTCA 14843609
Query 36203 TTGGAAAAC-GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAA 36261
||||||||| | ||| || ||||| |||| | || || ||||| ||||| |||||| |
Sbjct 14843608 TTGGAAAACCGCGAGGCCAGGCATCAGGCTGCATTTCTTGAGCCAGAATATCGACGCAGA 14843549
Query 36262 TGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA--- 36318
|| ||| ||||| | |||||||| || |||||| | | | | || || ||
Sbjct 14843548 AGAACCAAAAAAGGAGATTCCTTCCGTGGCAGCAAAGTCCACATCCCATTCCCCGTAGGT 14843489
Query 36319 ACCGGCACTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 36378
| | | |||| | ||| ||||| || |||||||| || ||||||||||
Sbjct 14843488 AGCCTCTTTGTCCCCAACCCAACGCAAGGCCCAGTCTGCCTTCTTCCTTCCACAAGGCAT 14843429
Query 36379 TGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAAT 36438
|||||| || | || |||||| | | | | || || |||||||| ||| || ||| |
Sbjct 14843428 TGTCTCGATGGTGTTGAAGAGAAATTCTGTCTCTTTGGAATCTTTAATATAAGTGTCAGT 14843369
Query 36439 CAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACA 36498
| |||||| |||| || ||||| |||||||| ||||| ||||| || || ||||||||
Sbjct 14843368 GAGGAGACTACACATCTCAGAATGGATGTTTTCCATGGCAATTTGGAAGCCATAGAAACA 14843309
Query 36499 TCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTAT 36558
| || || || |||| |||||| | | | || || | || |||||||| |||||
Sbjct 14843308 GCAGGCTTCTGTCATCTCAACTTCTTGGCCACACCGCTCCACCAAGTTTTCATTTACTAT 14843249
Query 36559 TCCGTCACTGGCTGCAAAAAACGCC--AAT----ACATGTTTTATAAAATATTTTTCGTT 36612
|| |||| || ||||| || ||| ||| || || |||||||| | | || |
Sbjct 14843248 GCCAACACTCGCCGCAAAGAAAGCCAGAATGTGAACGTGGGGTATAAAATCTCTCTCCTC 14843189
Query 36613 TGGTGTTAGTTTATTCCAATCATTG-ATATCTTTAGATATATCCACTTCTTCCACTGTCC 36671
|| | || ||||| | ||| || || || || | || ||| ||||| ||||||
Sbjct 14843188 AGGCTTCAG-CGATTCCCAGTGTTGAATGTCCTTGGAAAGATTCACCTCTTCAGCTGTCC 14843130
Query 36672 AAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAA 36731
|||| || ||||| || || ||| | || | ||| | ||||| || | || || || |
Sbjct 14843129 AAAAGGAAGCCTCAGCTTTCTTACATATCTGCCAAAGATCATGGTACTTCATAGGGAAGA 14843070
Query 36732 TAACAAA 36738
| |||||
Sbjct 14843069 TGACAAA 14843063
>seq7735
Length=17007418
Score = 167 bits (184), Expect = 3e-36
Identities = 158/202 (78%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 9231 TTCTTATTAGATACTTCCAAAAGCTGTAACAGATGCAAGAACAGATTGATGATATCCAAG 9290
|| |||||| | ||||||||| || ||||| |||| ||| || ||||||| |||||||
Sbjct 11874669 TTTTTATTAACTGCTTCCAAAAAGTGCAACAGGTGCAGGAATAGGTTGATGACATCCAAG 11874610
Query 9291 TAGAAATTGATAGAGGCTAACACATAGTCTTCAGGCGAGAGCTTATGTATTAGTGAGTGC 9350
|||| |||| | ||||| ||||| |||||||| || |||||||| || | ||||||
Sbjct 11874609 TAGAGGCTGATGGCAGCTAATACATACTCTTCAGGTGACAGCTTATGCATCAATGAGTGT 11874550
Query 9351 GTGTCATAGATAATGAATCCGCAGAATACAAGGGCCCCAAAAGCAGACAGGACCAGCTCC 9410
||||||||||| |||||||| ||||| | ||||| || | ||||| || || || ||||
Sbjct 11874549 GTGTCATAGATGATGAATCCACAGAAAAGCAGGGCTCCCACAGCAGCCAAGATCAACTCC 11874490
Query 9411 ACTGTTTCACTTTGCACAAATA 9432
| ||||| ||| | | |||||
Sbjct 11874489 ATTGTTTGACTATAGAAAAATA 11874468
Score = 138 bits (152), Expect = 1e-27
Identities = 102/119 (86%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 9480 CCTGCTCCAAGTTTACTGAAATCTCTCTTTGATTGTAGAGTATATGCAGTCAGAGCAAGA 9539
|||||||||| |||||||||||||||||| || |||||||||||| |||||| | |||||
Sbjct 11867524 CCTGCTCCAAATTTACTGAAATCTCTCTTAGACTGTAGAGTATATACAGTCAAACCAAGA 11867465
Query 9540 AACACTGCAGTAGTCAGCATGAAAGCTTGCATAACGACATGCACATCATAGAAAGTAAC 9598
|| || ||||||||||| || || ||||| | || | || ||||||||||||||||||
Sbjct 11867464 AATACAGCAGTAGTCAGTATAAATGCTTGGAGAATAATATACACATCATAGAAAGTAAC 11867406
Score = 104 bits (114), Expect = 3e-17
Identities = 90/108 (83%), Gaps = 4/108 (4%)
Strand=Plus/Minus
Query 9847 CCATTCGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGA 9906
||| ||| |||||||||||||| || ||||| |||||||||||||||| ||||||||||
Sbjct 11844935 CCAGTCGGATGTGCACACTGGCGGAGGCCACGCAGCTGCCATAGTTGAAATCGTCCTCGA 11844876
Query 9907 TGGAGGAGCACGCGTAGAGG--CTCGGCAT-GGCCATGGCGGC-GCAG 9950
|||||||||| | |||| || |||| | ||||||| |||| ||||
Sbjct 11844875 TGGAGGAGCAGGGGTAGCGGGAGTCGGGGTCGGCCATGTCGGCAGCAG 11844828
>seq7870
Length=10551609
Score = 131 bits (144), Expect = 2e-25
Identities = 111/137 (81%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 65181 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 65240
|| ||||||||||| ||||| ||||| ||||| || || || |||||||| ||||| |
Sbjct 10335168 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTATAAGGTTCAATG 10335109
Query 65241 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 65300
|||||||||||||||| ||| ||||||||||| ||||| ||||| || || | | ||||
Sbjct 10335108 GACTCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAA 10335049
Query 65301 CTATTTCTAAGACCGTA 65317
|| ||||| | ||| ||
Sbjct 10335048 CTGTTTCTTATACCATA 10335032
Score = 120 bits (132), Expect = 4e-22
Identities = 129/171 (75%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 64906 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 64965
|||| ||||| ||||||||||| || |||||| ||| | || || || || ||||| |
Sbjct 10337845 TCCAGCCGTAGAAATGCATACTGGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATGT 10337786
Query 64966 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 65025
||| |||||| |||||||| ||||| || || || || || ||||| || | | || |
Sbjct 10337785 TCAAAGATTGGCTTTGATCAATGAAAGCACCTCTTTCAGCTGCCATCTTAAGAACGGTTT 10337726
Query 65026 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 65076
| |||| ||||||||| | ||| ||||||| | |||| | || || ||||
Sbjct 10337725 TCTGTGAAATTTCCCACACAGTCTTATAAAGTTGCTTCAGGTCATCAGGAA 10337675
Score = 104 bits (114), Expect = 3e-17
Identities = 137/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 65419 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 65478
|||| || || ||||| || | || || || || ||||| || || || || || || |
Sbjct 10330155 CATAGGTTTCATATGGGCCATGCTCCTTGGCCAGGTCACAGCTGGCTTCCAAGGCTCCAT 10330096
Query 65479 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGAT 65538
||||||||||||| ||||||| |||||| || || ||||| | || ||||| ||||
Sbjct 10330095 AATAAATGGTTTCAAAGATCTGCTTATTCAGTAGCTGGGCTTCTGGACTCTCAAAAGGAT 10330036
Query 65539 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 65598
| | | |||||||| || ||||| | ||||| || || || || || || | ||| |
Sbjct 10330035 ACCTCATCAGAATAAAAGCATCTGCCAGACCTTGTACCCCGATTCCAATGGGGCGATGGC 10329976
Query 65599 TCTTATTAGA 65608
||||| ||
Sbjct 10329975 ATTTATTTGA 10329966
Score = 96.9 bits (106), Expect = 5e-15
Identities = 104/138 (75%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 66056 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCT 66115
|| |||||||||||| |||||||| ||||||||||| || | || | || |||| |
Sbjct 10325159 CTCCACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACG 10325100
Query 66116 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCA 66175
||||| || |||||||| ||||| || | ||| || ||| | | ||| || |||||||
Sbjct 10325099 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCCAGAAACTCAAAAATGTCTAAATGCCA 10325040
Query 66176 CGGTTCCAAGTATATGGC 66193
|| |||| ||| || ||
Sbjct 10325039 AGGCTCCAGGTAAATAGC 10325022
Score = 95.1 bits (104), Expect = 2e-14
Identities = 131/182 (72%), Gaps = 5/182 (3%)
Strand=Plus/Minus
Query 66786 TCCTCCA---TCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCT 66842
||||||| |||| |||| || | ||| |||||||||||||| | || || |||||
Sbjct 10311672 TCCTCCAGACTCAC--CACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTGGAGACGGCA 10311615
Query 66843 ATTCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCG 66902
|| || || || | |||||||| || ||||| | || || | || || ||| | ||
Sbjct 10311614 ATCCTTGCTGCCAGGATGGCATAGTCAGGATGCTTAGTCGTCAAGGTCGCAGCTGTCTCA 10311555
Query 66903 GCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTC 66962
|| |||| ||| || | ||| || || || || ||| | |||| |||||||| || |||
Sbjct 10311554 GCAGCCAAAGTATCTAGTTCCACAGTGGTGACCCCACTGTATAAGCCTTGGATTACTTTC 10311495
Query 66963 AT 66964
||
Sbjct 10311494 AT 10311493
>seq7842
Length=42459490
Score = 123 bits (136), Expect = 3e-23
Identities = 100/121 (83%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 36180 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 36239
|||| ||||| ||||| | ||| |||||||||||||| || ||||| ||||| || || |
Sbjct 7548465 CCTCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCAGGCATCAGGCCGCGTTTCT 7548406
Query 36240 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 36299
| ||||| ||||| |||||||| || ||||||||||| |||||||| || || ||||| |
Sbjct 7548405 TGAGCCAGAATATTGACGCAAAAGAACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAAG 7548346
Query 36300 C 36300
|
Sbjct 7548345 C 7548345
>seq7786
Length=83011774
Score = 107 bits (118), Expect = 3e-18
Identities = 95/119 (80%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 36182 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 36241
|| ||||| || || | ||| ||||||||||||||||||||||| || || | || ||
Sbjct 48121152 TCATCTCTGCTGATGAGTTCATTGGAAAACGTGAGTCCGGGCATGAGACCTCTTTTCTTT 48121211
Query 36242 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 36300
||||| ||||| | ||||| ||||| || |||||||| |||||||| || ||||| ||
Sbjct 48121212 AGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAATCCCTTCTACAGCAGCAAAAGC 48121270
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658108035796480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |