Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq7771 147 2e-30
seq7820 91.5 1e-13
>seq7771
Length=57971676
Score = 147 bits (162), Expect = 2e-30
Identities = 131/164 (80%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 20989 TCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACG 21048
||||||| |||| ||| ||||||| || || || |||||||||||||||||||| || |
Sbjct 7629510 TCAGGCCTGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGG 7629569
Query 21049 GGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAG 21108
| || || ||||||||||| | ||||||||||||||||| ||||||||||| ||
Sbjct 7629570 GCACACCCAGGCCCATGTCCCCTGACCTCTGGTACAGCTGACAGGACAGCTCGCCGTTCA 7629629
Query 21109 CCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATC 21152
||||||| ||||| || | | || || |||||||| ||||||
Sbjct 7629630 CCACGTAGAACTGGCAGAGGGCATGGCACGGAGGGAGGGCCATC 7629673
>seq7820
Length=31847680
Score = 91.5 bits (100), Expect = 1e-13
Identities = 261/396 (66%), Gaps = 4/396 (1%)
Strand=Plus/Minus
Query 2798 AAATTAATTGATGGAAAAAATACATCACAATCAAAACTCTCCATAATGCGCGTAATATAT 2857
|||| |||| | |||||||||| | || ||||| || |||||| | || | | ||
Sbjct 25920265 AAATCAATTTCTTGAAAAAATACGTTACTTTCAAATTCCTGCATAATCCTTGTCACAAAT 25920206
Query 2858 AGTTTTA-AGGGACACTTATAGTTAAGAACACTCTCATAAACAGATTTTCCTCCAATAAC 2916
||| | | | || | | | ||| | | || || |||||| | ||||| |
Sbjct 25920205 AGTCTAAGATGGCCTGGTTT-GTTCATGGCTTCCTTATGAACAGAACTGCCTCCCGCTAT 25920147
Query 2917 CCAGACCGTGTTTAATTGTTCTTTTAGTTTGTATTG-TCTATAGAAATTAAACGCATCGT 2975
||| ||| ||| | || | | || || |||| || ||| || || || ||||| |
Sbjct 25920146 CCAAACCATGTCCACTTTGTTTGCTAATTCTGATTGCTCAATA-AATTTTAATGCATCAT 25920088
Query 2976 CTAGCGTTCTCGCTAGAAAGTGTGCTCCGTGCGGTGGTTCACGTAATTCTCTGCTCAAAA 3035
| || || | || ||||| | ||||| || || ||||| | |||||||| | ||
Sbjct 25920087 CCAGACTTTTGGCAAGAAAAGGAGCTCCTTGTGGAGGTTCCTTGAGGTCTCTGCTGAGAA 25920028
Query 3036 TAATATTAATTCTGTTCACCAGAGGGCGCTTCTTTTCAGGGATGGAAAACCATGTTCTTT 3095
| ||||||||||| | | ||| | ||||| || || || || |||||| | |
Sbjct 25920027 CTAAATTAATTCTGTCCTTTAAAGGTTGATTCTTCTCGGGAATAGAGAACCATATCTTCC 25919968
Query 3096 TCCCCATAATAACCACATTCTTTTCACCTACAACCGATGGCGTAGACGTCATTTTCTGAA 3155
| |||||||| |||| ||||| || |||| | || || | || | |||||| | || |
Sbjct 25919967 TACCCATAATCACCAAATTCTGTTTACCTTCTACTGAGGAGGTTGTGGTCATTCTTTGGA 25919908
Query 3156 AATACATCATTTCGTTTCTAAGGTACGGCCAAGGCA 3191
|| |||| | ||| || || || ||||| ||||
Sbjct 25919907 AAAACATGAATTCATTCCTGAGCGGGGGCCAGGGCA 25919872
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427734959170560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |