Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq7767 118 8e-22 seq7842 87.8 1e-12 >seq7767 Length=50048226 Score = 118 bits (130), Expect = 8e-22 Identities = 131/175 (75%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 22748 TGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGC 22807 ||| |||||| ||||| ||||| || | |||||||| || |||||| | |||||||||| Sbjct 16036315 TGGACTTTGCTGCTGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCGACGATATTCTGGC 16036374 Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867 | ||||||||| || ||||| || ||||||||| || | |||||| | || | Sbjct 16036375 TCAAGAAACGTGACCTGATGCCTGGCCCCATGTTTTCCAATGAACTTATTAGCAGAGATG 16036434 Query 22868 AAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACC 22922 | ||| |||||||||||||||| || || |||| | || ||| ||||||| Sbjct 16036435 AGGGTTTACACTGTGACTTTGCCTGCCTGATGTTCAAACACCTGGTCCACAAACC 16036489 >seq7842 Length=42459490 Score = 87.8 bits (96), Expect = 1e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 22748 TGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGC 22807 |||| ||||| ||||| ||||| || | |||||||| || |||||| | |||||||||| Sbjct 7548343 TGGCTTTTGCTGCTGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCGTCAATATTCTGGC 7548402 Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867 | |||||||| || ||||| || | |||||||||| || | |||||| | || | Sbjct 7548403 TCAAGAAACGCGGCCTGATGCCTGGCCTCACGTTTTCCAATGAACTTATTAGCAGAGATG 7548462 Query 22868 A 22868 | Sbjct 7548463 A 7548463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356199422948416