Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq7857 84.2 1e-11
>seq7857
Length=43258702
Score = 84.2 bits (92), Expect = 1e-11
Identities = 140/201 (70%), Gaps = 6/201 (3%)
Strand=Plus/Plus
Query 33173 GTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCA 33232
|| |||||||| || |||||||||||||| | | || | || |||| ||||| |
Sbjct 31543475 GTTGACTCTTTCTGGATATTGTAATCAGAAAGAGTGCGGCCATCTTCCATCTGCTTGCTG 31543534
Query 33233 CTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTT---TTCGCTAATCGCCTGT 33289
||| || | | |||||||| | ||| ||||| ||||| || | || |||||
Sbjct 31543535 GCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATATTGGATATTCGCC--- 31543591
Query 33290 TTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGA 33349
|| || ||| ||| ||||| |||| | || ||||| || || || || || || ||
Sbjct 31543592 TTCACATTTTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTTAGG 31543651
Query 33350 GTTTTTACGAAAATTTGCATG 33370
|| || ||||| || ||||||
Sbjct 31543652 GTCTTCACGAAGATCTGCATG 31543672
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318747016477056
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |