Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq7759 118 9e-22 >seq7759 Length=36627259 Score = 118 bits (130), Expect = 9e-22 Identities = 112/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 127171 GGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATGCCACAGGCA 127230 || |||||||| |||| |||||||| ||||||||||| || ||||| ||||| ||||| Sbjct 5668609 GGTTGCCAAGCCTTGTCGGAGATGATCCAGTTCTACCTGGAGGAGGTGATGCCCCAGGCT 5668550 Query 127231 GAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAGCTGAAGACA 127290 || || |||| || |||| || ||||| || || |||||||| |||||||||||||| Sbjct 5668549 GAGAACCACGACCCAAACATCAAGGAACATGTGAACTCCCTGGGGGAAAAGCTGAAGACC 5668490 Query 127291 TTGAGACTTCGACTGCGTCGCTG 127313 | || || | ||||| || || Sbjct 5668489 CTCAGGCTGAGGCTGCGGCGTTG 5668467 Score = 89.7 bits (98), Expect = 4e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 127379 AGCTTCAGGAAAGAGGCGTGTACAAGGCCATGAGTGAGTTTGACATATTCATCAACTACA 127438 |||| || || ||||| || ||||| |||||||||||||||||||| ||||||||||||| Sbjct 5666301 AGCTCCAAGAGAGAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 5666242 Query 127439 TCGAGACTTACATG 127452 | || || |||||| Sbjct 5666241 TAGAAACCTACATG 5666228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430013140580864