Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq7759 118 9e-22
>seq7759
Length=36627259
Score = 118 bits (130), Expect = 9e-22
Identities = 112/143 (78%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 127171 GGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATGCCACAGGCA 127230
|| |||||||| |||| |||||||| ||||||||||| || ||||| ||||| |||||
Sbjct 5668609 GGTTGCCAAGCCTTGTCGGAGATGATCCAGTTCTACCTGGAGGAGGTGATGCCCCAGGCT 5668550
Query 127231 GAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAGCTGAAGACA 127290
|| || |||| || |||| || ||||| || || |||||||| ||||||||||||||
Sbjct 5668549 GAGAACCACGACCCAAACATCAAGGAACATGTGAACTCCCTGGGGGAAAAGCTGAAGACC 5668490
Query 127291 TTGAGACTTCGACTGCGTCGCTG 127313
| || || | ||||| || ||
Sbjct 5668489 CTCAGGCTGAGGCTGCGGCGTTG 5668467
Score = 89.7 bits (98), Expect = 4e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 127379 AGCTTCAGGAAAGAGGCGTGTACAAGGCCATGAGTGAGTTTGACATATTCATCAACTACA 127438
|||| || || ||||| || ||||| |||||||||||||||||||| |||||||||||||
Sbjct 5666301 AGCTCCAAGAGAGAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 5666242
Query 127439 TCGAGACTTACATG 127452
| || || ||||||
Sbjct 5666241 TAGAAACCTACATG 5666228
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430013140580864
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |