Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq7734 82.4 9e-11 >seq7734 Length=11085724 Score = 82.4 bits (90), Expect = 9e-11 Identities = 143/205 (70%), Gaps = 6/205 (3%) Strand=Plus/Minus Query 164500 TTAGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACA 164559 ||||| || |||||| | ||||| || | ||| |||| || || ||||| ||||| || Sbjct 201770 TTAGGTTGCAAACATGTTAAAGGCATCCTGTTATATGGGCCCCCAGGTTGTGGTAAGACT 201711 Query 164560 TTAATGGCTCGATGCATTGCTCAAGCTTTTAAATC---GCGACCCGTTAAAATTGTTAAT 164616 | |||||||| |||| |||| | || ||| | || || ||| | || ||| Sbjct 201710 CTCTTGGCTCGACAGATTGG-CAAGATGTTGAATGCAAGGGAGCCC--AAAGTGGTCAAT 201654 Query 164617 GGTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTT 164676 || || ||| | | ||||||||||| || || ||||| ||||| || | || | ||| Sbjct 201653 GGGCCAGAAATCCTTAACAAATATGTGGGAGAATCAGAGGCTAACATTCGTAAACTCTTT 201594 Query 164677 CAGGAGGCTGAAGAAGAACAAAAGA 164701 || |||||||| || |||| || Sbjct 201593 GCTGATGCTGAAGAGGAGCAAAGGA 201569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595813366195200