Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_006146.1
Length=171096
Score E
Sequences producing significant alignments: (Bits) Value
seq7759 129 6e-25
>seq7759
Length=36627259
Score = 129 bits (142), Expect = 6e-25
Identities = 112/139 (81%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 10140 AGGGCTACCTGGGATGTCAGGCCCTGTCTGAAATGATCCAGTTTTACCTGGAGGAAGTAA 10199
|||| |||||||| || || ||| |||| || ||||||||||| ||||||||||| || |
Sbjct 5668620 AGGGTTACCTGGGTTGCCAAGCCTTGTCGGAGATGATCCAGTTCTACCTGGAGGAGGTGA 5668561
Query 10200 TGCCACAGGCTGAAAATCAGGACCCCCACGCCAAAGAGCACGTGAACTCTCTGGGCGAGA 10259
|||| |||||||| || || ||||| || ||| || || |||||||| ||||| || |
Sbjct 5668560 TGCCCCAGGCTGAGAACCACGACCCAAACATCAAGGAACATGTGAACTCCCTGGGGGAAA 5668501
Query 10260 ATCTAAAGACCCTAAGGCT 10278
| || |||||||| |||||
Sbjct 5668500 AGCTGAAGACCCTCAGGCT 5668482
Score = 91.5 bits (100), Expect = 2e-13
Identities = 71/85 (84%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 10359 AGCTGCAGGAAAAAGGAGTCTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTATA 10418
|||| || || | ||| |||||||||||||||||||| |||||||| || || ||||| |
Sbjct 5666301 AGCTCCAAGAGAGAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 5666242
Query 10419 TAGAAGCATACATGACCATGAAAAT 10443
||||| | |||||||| ||||| ||
Sbjct 5666241 TAGAAACCTACATGACAATGAAGAT 5666217
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547325337886720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |