Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_006146.1 Length=171096 Score E Sequences producing significant alignments: (Bits) Value seq7759 129 6e-25 >seq7759 Length=36627259 Score = 129 bits (142), Expect = 6e-25 Identities = 112/139 (81%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 10140 AGGGCTACCTGGGATGTCAGGCCCTGTCTGAAATGATCCAGTTTTACCTGGAGGAAGTAA 10199 |||| |||||||| || || ||| |||| || ||||||||||| ||||||||||| || | Sbjct 5668620 AGGGTTACCTGGGTTGCCAAGCCTTGTCGGAGATGATCCAGTTCTACCTGGAGGAGGTGA 5668561 Query 10200 TGCCACAGGCTGAAAATCAGGACCCCCACGCCAAAGAGCACGTGAACTCTCTGGGCGAGA 10259 |||| |||||||| || || ||||| || ||| || || |||||||| ||||| || | Sbjct 5668560 TGCCCCAGGCTGAGAACCACGACCCAAACATCAAGGAACATGTGAACTCCCTGGGGGAAA 5668501 Query 10260 ATCTAAAGACCCTAAGGCT 10278 | || |||||||| ||||| Sbjct 5668500 AGCTGAAGACCCTCAGGCT 5668482 Score = 91.5 bits (100), Expect = 2e-13 Identities = 71/85 (84%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 10359 AGCTGCAGGAAAAAGGAGTCTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTATA 10418 |||| || || | ||| |||||||||||||||||||| |||||||| || || ||||| | Sbjct 5666301 AGCTCCAAGAGAGAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 5666242 Query 10419 TAGAAGCATACATGACCATGAAAAT 10443 ||||| | |||||||| ||||| || Sbjct 5666241 TAGAAACCTACATGACAATGAAGAT 5666217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547325337886720