Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_006150.1
Length=221454
Score E
Sequences producing significant alignments: (Bits) Value
seq7759 159 5e-34
seq7806 131 2e-25
>seq7759
Length=36627259
Score = 159 bits (176), Expect = 5e-34
Identities = 181/243 (74%), Gaps = 0/243 (0%)
Strand=Plus/Plus
Query 9622 ATGAGTCGAGTGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGTTCTCGTTTCAGA 9681
||||||| | ||||| || || | || ||| ||| |||||||| || |||| ||
Sbjct 19738515 ATGAGTCTGCTCGTCTGGAATAGCCGCTCATCATCCCACTCTGGATGCTCCTGTTTAAGC 19738574
Query 9682 ACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATCATGAGACCAGGC 9741
||||| || |||||||||||||||| ||||| || || ||||||||||| |||||||||
Sbjct 19738575 ACATCACAGACTCTGTTGTGTTCCCGTAGCCAAATTGTGGCGTACATCATCAGACCAGGC 19738634
Query 9742 ACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATATTTTCGGGCACTTCGGGAGGA 9801
||||| || || | || || || ||||| | || | | ||| || | | ||| ||
Sbjct 19738635 ACCAGCCCGAAGACTTCCTGGCCCACAGCAAACCGTAGGTGTTCAGGAATATGGGGTGGG 19738694
Query 9802 TAGATCATGTGCACCTGGACATCTTTGACCGAGGGGGGATACATTTCACCGTCAATAATC 9861
|||||||| | |||||| ||||||||| | ||| ||||||| || || ||||| | |
Sbjct 19738695 TAGATCATCTCCACCTGAGTATCTTTGACTGTGGGAGGATACACCTCTCCATCAATTACC 19738754
Query 9862 TGA 9864
|||
Sbjct 19738755 TGA 19738757
Score = 134 bits (148), Expect = 2e-26
Identities = 151/202 (75%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 10028 TCTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAAA 10087
|||||||||||| ||||||||||| ||||| || || |||||| ||| ||| | ||
Sbjct 19739569 TCTTACCCCATGGCCCAGTCCTTTGGTGAAAGCTGGCCCTCGCTTATGATCTGTCTTGAA 19739628
Query 10088 AAACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGATC 10147
|||||| || ||||| || ||| |||| || |||||||| | || ||||||||||||||
Sbjct 19739629 AAACTGATGGGTGAAGTGCTGGGCAAAGAATGCAAACATCATATTTGTGCCCTGGGGATC 19739688
Query 10148 GGGAGTGAAGGTCCTCCGAAGAAGAGTTTTTTCCACAACGTGTGCCGCATCCGGCAGAtt 10207
||| |||| | || | |||||| ||||||||||| | | | ||| || || |
Sbjct 19739689 AGGAATGAACTTTCTTCTTAGAAGAAATTTTTCCACAATCTCTTTTGAATCGGGAAGCTC 19739748
Query 10208 ttttttACCTGGTGAACGAGAA 10229
||| || |||| || |||||
Sbjct 19739749 TTTCTTGCCTGAAAAATGAGAA 19739770
Score = 87.8 bits (96), Expect = 3e-12
Identities = 111/153 (73%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 10287 TCACCTTTGACCCCAAGAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCG 10346
|||||||| || || | || |||||||| || | || || || || ||| || |
Sbjct 19740180 TCACCTTTCACACCCATGGGTGTTGGACAGTCATCAGCCACAGGGGGAAGAGCTCTGGTA 19740239
Query 10347 TAATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTAGATG 10406
|||||||||||||| || || |||||||||||| || | |||||| | ||||| |
Sbjct 19740240 TAATAGGAGAGATTAGAAAAGGCTTCCCAGCTTTTATAGCCATAGTCCACATTGTAAGTT 19740299
Query 10407 GGAGGGCTGTCAATCAAATCGGATCTACCTGAA 10439
|| || || |||||||||| || || |||||
Sbjct 19740300 GGTGGACTCTCAATCAAATGTGACCTGGCTGAA 19740332
>seq7806
Length=37070314
Score = 131 bits (144), Expect = 2e-25
Identities = 171/237 (72%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 8739 TCTTGACGATCCCAAACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGG 8798
||||||| || || |||| || || ||||| ||||| || |||||||| | || |
Sbjct 10371793 TCTTGACCATATTGAAACCCATCTCACCACCGAATGTGCTCGGCTTCCAGTACTCTGGAG 10371852
Query 8799 AGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGC 8858
|||||||| ||| | | |||||| ||||||||||| |||||||| | || | || |
Sbjct 10371853 AGCAGATGGGATTCCCTAGGAGGCCCTTGAGGGAAAAGGGAGCCCCAATTTCTATCATAC 10371912
Query 8859 TCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCA 8918
|||| || ||||||| ||| ||| || ||| |||| | | || | ||| |||||||
Sbjct 10371913 TCTCCCCAAAGATGGAGTTTGGATGGCACTTCTCCAGAAGCAGCCCCGGGTAGAACTCCA 10371972
Query 8919 CAGCCTCGATGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATTTCCTTTTCTCCTG 8975
|| ||||||| ||| || || || | ||||| ||||| ||||| || ||||
Sbjct 10371973 AGGCATCGATGTGTCCATACAGCTCCTCCAACTCGGCTGCGATCTCCTTCTCCCCTG 10372029
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 708455081159680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |