Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq7767 100 2e-16
seq7858 93.3 4e-14
seq7857 82.4 6e-11
>seq7767
Length=50048226
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342
|| ||||| ||||| || ||||| || ||||| || ||||| ||| |||| || ||
Sbjct 33066959 AAGATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGATCCC 33066900
Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402
|| || | | | | ||||| || ||| ||||| ||||| | || ||||
Sbjct 33066899 TCGGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGAT 33066840
Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462
||||| ||||| || | ||| ||||| ||| | ||||||| || || | || ||
Sbjct 33066839 CAGCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTAC 33066780
Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||||||||||| ||||||||| | ||| | |||| |||| | || || ||
Sbjct 33066779 AACATTCAAAAGGAGTCTACTCTTCATCTTGTGTGGAGACTTCGTGGTGG 33066730
>seq7858
Length=29646629
Score = 93.3 bits (102), Expect = 4e-14
Identities = 156/226 (69%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 115287 TGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGCG 115346
|||| ||||| | ||||| |||||||| || ||||| ||| |||| | || || |
Sbjct 12424960 TGCAGATTTTCCTGAAAACCCTCACGGGGAAGACCATCACCCTCGAGCCTGAACCCTCGG 12424901
Query 115347 ACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAGC 115406
| || | | | | ||| | || ||| ||||| ||||| | || ||||||||
Sbjct 12424900 ATACAATAGAAAATGTACAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAGC 12424841
Query 115407 AAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAACA 115466
| ||||| || ||| ||||| ||| | ||| ||| || || | || || ||||
Sbjct 12424840 AGAGACTGATCGTTGCTGGCAAGCAACTGGAAAATGGATGCACTTTGTCTGACTACAACA 12424781
Query 115467 TTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||||||| ||||||||| | ||| | ||||||||| | || || ||
Sbjct 12424780 TTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 12424735
>seq7857
Length=43258702
Score = 82.4 bits (90), Expect = 6e-11
Identities = 138/200 (69%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342
|||||||| || || || || || || || || || ||||| || | || |||| ||
Sbjct 31543902 AAAATGCAGATCTTCGTGAAGACCCTAACCGGCAAGACCATCCCCCTGGAGGTGGAGCCC 31543843
Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402
|| |||| | | | | || || || || |||||||| ||| ||||| |||
Sbjct 31543842 AGTGACATCATCGAAAATGTGAAGGCCAAGATCCAAGATAAAGAGGGCATCCCCCCTGAC 31543783
Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462
||||| || || |||| ||| ||||| || | ||||||| | || | | ||||||
Sbjct 31543782 CAGCAGAGGCTCATTTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTAT 31543723
Query 115463 AACATTCAAAAAGAGTCTAC 115482
||||| || |||||||| ||
Sbjct 31543722 AACATCCAGAAAGAGTCGAC 31543703
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425303192496640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |