Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq7767 95.1 1e-14
seq7823 91.5 1e-13
seq7857 82.4 7e-11
>seq7767
Length=50048226
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 131025 CACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTC 131084
||| | ||| | || |||||||||||||||||||| || || ||||| || ||
Sbjct 33066747 CACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATCTTC 33066806
Query 131085 TAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGT 131144
|| |||||||| || |||| | | |||||| || ||||| |||||||| || ||
Sbjct 33066807 CAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTG 33066866
Query 131145 GATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTT 131204
|| || ||| | | || | ||||| | || || | |||| ||| | ||| ||
Sbjct 33066867 AATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGATCAACCTCGAGGGTGATGGTCTT 33066926
Query 131205 ACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| || || ||||| ||||||||||||||
Sbjct 33066927 CCCCGTAAGGGTTTTCACGAAAATCTGCAT 33066956
>seq7823
Length=12955506
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 131006 AGCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGC 131065
||||||| | || ||| || || | || | || ||||| || || |||||||||||
Sbjct 3355554 AGCCACCCCTCAGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAG 3355495
Query 131066 TCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125
| ||||| || || |||||||||||||| | || | | ||||||||| || |
Sbjct 3355494 AAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAAATGAGCCTCTGCTGGTCAGGGG 3355435
Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185
|||| || ||||| || ||| || ||| | | || | || || ||| ||| |
Sbjct 3355434 GGATGCCCTCTTTATCTTGGATCTTGGCCTTCACGTTTTCGATGGTGTCACTGGGCTCCA 3355375
Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|| | ||| | ||| || ||||| || || || ||||| |||||||||
Sbjct 3355374 CCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATG 3355325
Score = 82.4 bits (90), Expect = 7e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| | || ||||| || | || | ||||||||| || || |||||||||||
Sbjct 3355325 GCCACCCCTCAGGCGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGA 3355266
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| ||||| || || |||||||||||||| |||| | | ||||||||| || ||
Sbjct 3355265 AAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGG 3355206
Query 131127 GATTCCTTCTTTGTC 131141
||| || ||||| ||
Sbjct 3355205 GATGCCCTCTTTATC 3355191
>seq7857
Length=43258702
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 131025 CACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTC 131084
||| | ||| | || |||||||||||| ||||||| || || ||||| || ||
Sbjct 24178164 CACAAGATGAAGAGTGGACTCCTTTTGAGTGTTGTAGTCAGACAGAGTGCGTCCATCTTC 24178105
Query 131085 TAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGT 131144
|| |||||||| || |||| || | |||||| || ||||| |||||||| || ||
Sbjct 24178104 CAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTG 24178045
Query 131145 GATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTT 131204
|| || ||| | | | | ||||| | || || |||| || | ||| ||
Sbjct 24178044 AATCTTGGCCTTTACATTTTGTATTGTATCCGAGGGTTCAGCCTCGAGAGTGATGGTCTT 24177985
Query 131205 ACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | |||||||| ||||||||||||||
Sbjct 24177984 CCCCATAAGAGTTTTCACGAAAATCTGCAT 24177955
Score = 82.4 bits (90), Expect = 7e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| | || |||| || | || | ||||||||| || || ||||| |||||
Sbjct 31543672 GCCACCTCTCAGGTGCAGAACCAGGTGCAGGGTCGACTCTTTCTGGATGTTATAATCAGA 31543731
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| ||||| || || |||||||||||||| | || | | ||||||||| || ||
Sbjct 31543732 AAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAAATGAGCCTCTGCTGGTCAGGGGG 31543791
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || ||||| || ||| || ||| | | || | | || ||| ||| |
Sbjct 31543792 GATGCCCTCTTTATCTTGGATCTTGGCCTTCACATTTTCGATGATGTCACTGGGCTCCAC 31543851
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| || |||||||| || || ||||| ||||||||
Sbjct 31543852 CTCCAGGGGGATGGTCTTGCCGGTTAGGGTCTTCACGAAGATCTGCAT 31543899
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471966353940480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |