Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq7865 118 7e-22
seq7828 111 1e-19
seq7767 102 5e-17
seq7857 91.5 1e-13
seq7818 87.8 1e-12
seq7765 86.0 4e-12
>seq7865
Length=68117122
Score = 118 bits (130), Expect = 7e-22
Identities = 83/95 (87%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||| ||||||||||||||||||| || |||||||| ||||| || ||||||||
Sbjct 38332739 AAGCCCATTCCCTTGGCTGTGGTTTCTCTGGATAGTAGGTAGGGACAGTGGGAATCTCGT 38332798
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
| |||| ||||||||||||||||||||||||||||
Sbjct 38332799 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 38332833
Score = 82.4 bits (90), Expect = 5e-11
Identities = 75/95 (79%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|| ||| ||||||||||||||||||| || ||||||| ||||| || ||||| ||
Sbjct 8948176 AAACCCATTCCCTTGGCTGTGGTTTCACTGAATAGTAGGTAGGGATAGTGGGAATCTTGT 8948117
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
| |||| ||||| | | |||||||||||| || ||
Sbjct 8948116 TCATCCATTCATACACATCACTAATTAGACGATGA 8948082
>seq7828
Length=21597463
Score = 111 bits (122), Expect = 1e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164
|||||| | |||||||||| |||||||||||| ||||| ||||||||| |||| | ||
Sbjct 14213374 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGGACGTCCATC 14213433
Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224
|| | ||| || || ||||| || || | || ||||| | || | ||||| || |
Sbjct 14213434 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATT 14213493
Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284
| ||| || ||| | ||| | | ||||| |||||| || | || || ||
Sbjct 14213494 CTGAATCTTGGCCTTTATATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGATGGT 14213553
Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|| ||||| | |||||||||||| |||||||| ||
Sbjct 14213554 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCATCTT 14213589
>seq7767
Length=50048226
Score = 102 bits (112), Expect = 5e-17
Identities = 151/214 (71%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 38107 ACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGT 38166
|||| | ||||||||| |||||||||||| ||||| ||||||||| ||| | || |
Sbjct 33066746 ACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATCTT 33066805
Query 38167 CTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCA 38226
| | ||| || || ||||| || || | || ||||| | || | ||||| || |||
Sbjct 33066806 CCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCT 33066865
Query 38227 TAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTT 38286
||| || ||| ||||| | | ||||| ||||| || | || || || |
Sbjct 33066866 GAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGATCAACCTCGAGGGTGATGGTCT 33066925
Query 38287 TACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
| ||||| | |||||||||||| |||||||| ||
Sbjct 33066926 TCCCCGTAAGGGTTTTCACGAAAATCTGCATCTT 33066959
>seq7857
Length=43258702
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 38106 AACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCG 38165
||||| | |||||||||| |||||||||| | ||||| ||||||| | ||| | ||
Sbjct 24178166 AACACAAGATGAAGAGTGGACTCCTTTTGAGTGTTGTAGTCAGACAGAGTGCGTCCATCT 24178107
Query 38166 TCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCC 38225
|| | ||| || || ||||| || | | || ||||| | || | ||||| || |||
Sbjct 24178106 TCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCAGGAGGAATTCCTTCCTTATCC 24178047
Query 38226 ATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTT 38285
||| || ||| ||||| || | ||||| |||| | || | || || ||
Sbjct 24178046 TGAATCTTGGCCTTTACATTTTGTATTGTATCCGAGGGTTCAGCCTCGAGAGTGATGGTC 24177987
Query 38286 TTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|| ||| | | ||||||||||| |||||||| ||
Sbjct 24177986 TTCCCCATAAGAGTTTTCACGAAAATCTGCATCTT 24177952
>seq7818
Length=84771923
Score = 87.8 bits (96), Expect = 1e-12
Identities = 149/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164
|||||| | |||||||||| |||||||||||| ||||| |||||| |||||| ||
Sbjct 26785801 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGATGGACAAAGTACGTTCATC 26785742
Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224
| | ||| || || ||||| || || | || ||||| | || | |||| || ||
Sbjct 26785741 TCCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCACAAGGAATTTCTTCCTTATC 26785682
Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284
| ||| || ||| |||| | ||| | |||||| || | || |||||
Sbjct 26785681 CTGAATCTTGACCTTTGCATTGTCTGTTGTAGCCGAGGGTTCAACCTCAAGAGTGATAGT 26785622
Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|| || || | |||||||||||| |||||||| ||
Sbjct 26785621 CTTCCCGGTAAGGGTTTTCACGAAAATCTGCATTTT 26785586
>seq7765
Length=11866429
Score = 86.0 bits (94), Expect = 4e-12
Identities = 66/77 (86%), Gaps = 1/77 (1%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||||||||||||||||||||| |||||| | |||||||||| ||||| ||||||
Sbjct 1511906 CTCTCTCTTCAAAGTTCTTTTCAAC-TTCCCTTATGGTACTTGTTGACTATCCGTCTCGT 1511964
Query 20007 GGTAATATTTAGCCTTA 20023
| ||||||||||||
Sbjct 1511965 GCCGGTATTTAGCCTTA 1511981
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334915065165632
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |