Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq7846 104 2e-17 seq7857 96.9 3e-15 >seq7846 Length=12828309 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055 || ||||| || || || ||||| ||||||||||| ||||||| | || |||||| | Sbjct 9163238 ACGATGCAGATCTTCGTGAAGACCTTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCC 9163179 Query 25056 TCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 |||||| |||||| | ||| || ||| |||||||| || || || || ||| Sbjct 9163178 AGTGACACCATCGAGAACGTCAAGGCGAAGATCCAGGACAAAGAGGGCATCCCCCCCGAC 9163119 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||| || | || |||||||| ||||| | || || | ||||| || || ||| Sbjct 9163118 CAGCAGAGGTTGATCTTTGCCGGGAAACAGCTGGAGGACGGGCGCACCCTGTCAGACTAC 9163059 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || ||||| || || || || || Sbjct 9163058 AACATCCAGAAGGAGTCCACTCTGCACTTGGTCCT 9163024 >seq7857 Length=43258702 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | ||||| || ||||||| | || |||||| | | Sbjct 31543671 ATGCAGATCTTCGTGAAGACCCTAACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 31543612 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || ||||| || ||| | ||||| || || || |||||||| Sbjct 31543611 GACACCATTGAAAATGTGAAGGCGAATATCCAATATAAAGAGGGCATCCCCCCTGACCAG 31543552 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || |||| |||||| |||| || | ||||||| |||||| | ||||||||| Sbjct 31543551 CAGAGGCTTATCTTTGCCAGCAAGCAGATGGAAGATGGCCGCACTCTTTCTGATTACAAT 31543492 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || || ||||| || || || || Sbjct 31543491 ATCCAGAAAGAGTCAACTCTCCA 31543469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433286426511680