Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq7767 219 5e-52
seq7820 190 2e-43
seq7842 96.9 4e-15
>seq7767
Length=50048226
Score = 219 bits (242), Expect = 5e-52
Identities = 456/671 (68%), Gaps = 6/671 (1%)
Strand=Plus/Minus
Query 93038 ATTTCTATTACTCTACTATTTGGT-GGTTTTTGTACGACATAATTGTACATTAAGCACGC 93096
||||| | ||||| || |||| ||||| || || | | ||| |||| | ||| ||
Sbjct 16036513 ATTTCCTTCACTCT-CTGCTTGGAAGGTTTGTGGACCAGGTGTTTGAACATCAGGCAGGC 16036455
Query 93097 AAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACT-CATTGCTGAATGTTAAACCTG 93155
|||||| |||||||| || |||| || || || | ||||| || | || |
Sbjct 16036454 AAAGTCACAGTGTAAACCCTCATCTC-TGCTAATAAGTTCATTGGAAAACATGGGGCCAG 16036396
Query 93156 GTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATAC 93215
| | ||| | |||||||||||||| ||||| | |||||| ||||||||| || || |
Sbjct 16036395 GCATCAGGTCACGTTTCTTGAGCCAGAATATCGTCGCAAAAGAACCAGAAAAGAAGATTC 16036336
Query 93216 CTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCC 93275
||||||| || ||||| |||||| ||||| | | | || || | |||
Sbjct 16036335 CTTCCACAGCAGCAAAGTCCACAACCCGTTCCCCGTAGGTAGCCTCTTTGTCCCCAGTCC 16036276
Query 93276 ATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATA 93335
| | || ||||| || || || ||||| | |||||| | ||| |||| ||||| || |
Sbjct 16036275 AATGCAAGGCCCAGTCTGCCTTCTTCTTTACACAAGGCATTGTCTCGAGGGCGTTGAAGA 16036216
Query 93336 GGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAG 93395
| | || | || | |||||| | || || || || | ||| ||||| ||||
Sbjct 16036215 GAAATTCCCTTTCTTTGGAATCTTTAACATAAGTGTCAATGAGGAGACTGTACATCTCAG 16036156
Query 93396 AATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCA 93455
|||||| || ||||| |||||| |||| || |||||||| | ||||| || ||||| |
Sbjct 16036155 AATGGATGTTTTCCATGGCAATTCGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAA 16036096
Query 93456 CTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaa 93515
||||||| ||| | ||| || | |||||||| ||||| ||||| | ||||| |
Sbjct 16036095 CTTCTTGGCTAAACCGCTCCACCAAGTTTTCATTTACTATGCCATCACTCGGCGCAAAGA 16036036
Query 93516 aaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCCCAAT-CGGAT 93574
|||||| | || || ||| | | |||| ||| || || ||| | | ||
Sbjct 16036035 AAGCCAGAACGTGGGATAGAAAGTATCTCTCCTCAGGCTTCAGGGATTCCTGGTGCTGA- 16035977
Query 93575 AGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTAC 93634
| || || |||||||| || ||||| | |||||||| || || || ||||| | |||
Sbjct 16035976 ATGTCCTTGGAAAGATCCACCTCTTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTCATAC 16035917
Query 93635 ATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTT 93694
|| | ||| || || || || | || || |||||||| ||| |||||| ||| |
Sbjct 16035916 ATCTGCCAAATATCATGGTACCCGACAGGGAAGATGACAAAGCGACGAGGGTTTTCTCTC 16035857
Query 93695 AGTAACGGCTC 93705
|||| |||||
Sbjct 16035856 AGTAGTGGCTC 16035846
>seq7820
Length=31847680
Score = 190 bits (210), Expect = 2e-43
Identities = 439/654 (67%), Gaps = 13/654 (2%)
Strand=Plus/Minus
Query 93062 GGTTTTTGTACGACATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCT 93121
||||| || || | | ||| |||| | ||| ||||||| | |||||||| || |||
Sbjct 14843683 GGTTTATGGACCAGGTGTTTGAACATCAGGCAGGCAAAGTTGTGGTGTAAACCCTCATCT 14843624
Query 93122 CGTGATATCAA-CTCATTGCTGAAT-GTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCC 93179
| || || || ||||||| || | | || || | ||| | | |||||||||||
Sbjct 14843623 C-TGCTAATAAGCTCATTGGAAAACCGCGAGGCCAGGCATCAGGCTGCATTTCTTGAGCC 14843565
Query 93180 AAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAA 93239
| ||||| || ||| || |||| |||| | || |||||| ||| ||||| |||||
Sbjct 14843564 AGAATATCGACGCAGAAGAACCAAAAAAGGAGATTCCTTCCGTGGCAGCAAAGTCCACAT 14843505
Query 93240 TACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTT 93299
| ||| | | | || || | | ||| || ||||| || || || |
Sbjct 14843504 CCCATTCCCCGTAGGTAGCCTCTTTGTCCCCAACCCAACGCAAGGCCCAGTCTGCCTTCT 14843445
Query 93300 TCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTC 93359
|| | |||||| | ||| ||||| | ||| || || | ||| ||| | ||||||
Sbjct 14843444 TCCTTCCACAAGGCATTGTCTCGATGGTGTTGAAGAGAAATTCTGTCTCTTTGGAATCTT 14843385
Query 93360 GTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTT 93419
|| || || || | | ||| | |||| |||||||||| || ||||| |||||||
Sbjct 14843384 TAATATAAGTGTCAGTGAGGAGACTACACATCTCAGAATGGATGTTTTCCATGGCAATTT 14843325
Query 93420 GGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGA 93479
|||| || |||||||| | ||||| || |||| |||||||| | | | ||| || |
Sbjct 14843324 GGAAGCCATAGAAACAGCAGGCTTCTGTCATCTCAACTTCTTGGCCACACCGCTCCACCA 14843265
Query 93480 GATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATG--CTT----TA 93533
|||||||| ||||| ||| | || ||||| ||||||| || || | | ||
Sbjct 14843264 AGTTTTCATTTACTATGCCAACACTCGCCGCAAAGAAAGCCAGAATGTGAACGTGGGGTA 14843205
Query 93534 TAAAATGTTTCTCATCATCTTTAAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGA 93593
|||||| | |||| ||| || ||| ||||| | | || || ||||||| |
Sbjct 14843204 TAAAATCTCTCTCCTCAGGCTTCAGCGATTCCCAGTGTTGAATGTCCTTGGAAAGATTCA 14843145
Query 93594 CTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATC--CCATATGTCTTG 93651
| ||||| | |||||||| || || || ||||| | |||||||| ||| | || ||
Sbjct 14843144 CCTCTTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCT--TACATATCTGCCAAAGATCATG 14843087
Query 93652 ATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAACGGCTC 93705
|| | || || || |||||||| ||| |||||| ||| | |||| |||||
Sbjct 14843086 GTACTTCATAGGGAAGATGACAAAGCGAAGAGGGTTTTCTGTCAGTAGGGGCTC 14843033
>seq7842
Length=42459490
Score = 96.9 bits (106), Expect = 4e-15
Identities = 89/113 (79%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 93134 TCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA 93193
|||||| || || | || || | ||| || |||||||||||||| |||||||| |||
Sbjct 7548445 TCATTGGAAAACGTGAGGCCAGGCATCAGGCCGCGTTTCTTGAGCCAGAATATTGACGCA 7548386
Query 93194 AAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTC 93246
||| ||||||||| || || |||||||| || ||||| ||||||| |||||
Sbjct 7548385 AAAGAACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAAGCCACAACCCGTTC 7548333
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556806004897280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |