Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq9 107 2e-18
seq7828 98.7 8e-16
seq7767 95.1 1e-14
>seq9
Length=2205763
Score = 107 bits (118), Expect = 2e-18
Identities = 152/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTG--GAAAC 22274
||||||| || ||||| || || | || || || || |||| ||||| ||| || |
Sbjct 1749555 AGATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTGTCGAGCC 1749496
Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334
|| || ||| | || || ||||| ||||| |||||||||||||| || || || ||
Sbjct 1749495 CAGTGACACCATTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCGCCTGA 1749436
Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394
|| || ||||| | ||||| ||||||||| | || ||| ||| || | || || ||
Sbjct 1749435 CCAGCAGCGTCTGGTTTTTGCGGGCAAACAGCTGGAAGATGGCCGTACTCTGTCAGACTA 1749376
Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGT 22427
|| || || ||||| |||||| | || || ||
Sbjct 1749375 TAATATCCAGAAAGAGTCCACCCTGCACTTGGT 1749343
>seq7828
Length=21597463
Score = 98.7 bits (108), Expect = 8e-16
Identities = 153/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||| ||||| || ||||| | || || || || ||||||| || || ||| ||
Sbjct 14213589 AAGATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACTCTCGAGGTTGAACCC 14213530
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| ||||| | || |||| || || ||||| | ||||| || ||||| || |||
Sbjct 14213529 TCGGATACAATAGAAAATATAAAGGCCAAGATTCAGAATAAGGAAGGAATTCCTCCTGAT 14213470
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| || | || || ||||| ||||| || | || ||| || | | || || |||
Sbjct 14213469 CAGCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTCCTTTGTCTGACTAC 14213410
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGA 22434
||||||||||| || ||||| | ||| | || ||| ||
Sbjct 14213409 AACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGA 14213371
>seq7767
Length=50048226
Score = 95.1 bits (104), Expect = 1e-14
Identities = 152/216 (70%), Gaps = 3/216 (1%)
Strand=Plus/Minus
Query 22212 TGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGA 22271
|||| ||||||| || ||||| || || | | || || | ||| ||||||| ||
Sbjct 2430284 TGTAGAGATGCAGATCTTTGTGAAGACCCTGAG-GGCAAGATCATCATCCTTGAAGCTGA 2430226
Query 22272 AACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACC 22331
||| || ||| || ||| ||||| ||||| |||||||||||||| || |||||
Sbjct 2430225 GCCCAATGACACCACTGAGGATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCACC 2430166
Query 22332 CGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGA 22391
|| || || | ||| || |||| |||||||| | |||||| | ||| |||| ||
Sbjct 2430165 TGACCAGCATCATCTGATTCTTGCGAGCAAACAGCTGGAGGATGGCTGCA--TTCTCAGA 2430108
Query 22392 TTACAACATTCAAAAAGAATCCACCATACATTTAGT 22427
||||| || || ||||| |||| | | || || ||
Sbjct 2430107 CTACAAAATCCAGAAAGAGTCCATCCTGCACTTGGT 2430072
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||| ||||| || ||||| | || || || || |||| || || || || ||
Sbjct 33066959 AAGATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGATCCC 33066900
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| ||||| | || || | || || ||||| || ||||| || ||||| || |||
Sbjct 33066899 TCGGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGAT 33066840
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| || | || || ||||| ||||| || | || ||| ||||| | || || |||
Sbjct 33066839 CAGCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTAC 33066780
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||||||||| || || || | ||| | || | | || | || || |||
Sbjct 33066779 AACATTCAAAAGGAGTCTACTCTTCATCTTGTGTGGAGACTTCGTGGTGGT 33066729
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419687731295680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |