Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq7846 167 4e-36 seq7823 161 2e-34 seq7857 158 2e-33 seq9 140 6e-28 seq7858 134 3e-26 seq7828 125 1e-23 seq7782 113 8e-20 seq7767 105 1e-17 seq7825 100 5e-16 seq20 87.8 3e-12 seq7869 86.0 1e-11 >seq7846 Length=12828309 Score = 167 bits (184), Expect = 4e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| | | ||||| |||||||| || |||||||| || |||||||| || || || Sbjct 9163009 CCTCCCCTCAAGCGCAGGACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCTGAC 9163068 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||| || || | ||| |||||||| || || | || || |||||||| || Sbjct 9163069 AGGGTGCGCCCGTCCTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCGGGGGGG 9163128 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| || ||||| || ||||| ||||||||| |||||||||||| | || || Sbjct 9163129 ATGCCCTCTTTGTCCTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACC 9163188 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| ||||||||| || || || | |||||| ||||| |||||||| Sbjct 9163189 TCCAGGGTGATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCAT 9163235 >seq7823 Length=12955506 Score = 161 bits (178), Expect = 2e-34 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| ||| || || |||||||| |||||||| ||||| || || || | |||||||| Sbjct 3355534 ACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 3355475 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | |||||| || || || ||||| || || ||||| || || ||||| || || ||||| Sbjct 3355474 AGCTGCTTGCCTGCAAAAATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGG 3355415 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| ||||| ||| ||||||||||| | || || |||| ||||||||| || Sbjct 3355414 ATCTTGGCCTTCACGTTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 3355355 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || |||||||| ||||| |||||||| Sbjct 3355354 CCGGTCAGGGTCTTCACGAAGATCTGCAT 3355326 Score = 140 bits (154), Expect = 6e-28 Identities = 169/232 (73%), Gaps = 10/232 (4%) Strand=Plus/Minus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 ||||||| |||| ||| || || |||||||| |||||||| ||||| || || || | Sbjct 3355315 AGGCGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGG 3355256 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | |||||| || || || ||||| || || ||||| || || ||||| || Sbjct 3355255 CCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCT 3355196 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 || ||||| ||||| ||||| || ||||||||||| | || || |||| |||| Sbjct 3355195 TTATCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTG 3355136 Query 68424 ATGGTTTTTCCC----------GTGAGGGTCTTGACGAATATCTGCATTATG 68465 ||||| || || || | |||||| ||||| ||||||||| || Sbjct 3355135 ATGGTCTTGCCNNNNNNNNNNAGTCAAGGTCTTCACGAAGATCTGCATTTTG 3355084 >seq7857 Length=43258702 Score = 158 bits (174), Expect = 2e-33 Identities = 168/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 ||| ||| |||| ||| || || |||||||| |||||||||||||| || || || | Sbjct 31543682 AGGTGCAGAACCAGGTGCAGGGTCGACTCTTTCTGGATGTTATAATCAGAAAGAGTGCGG 31543741 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | |||||| || || || ||||| || || ||||| || || ||||| || Sbjct 31543742 CCATCTTCCAGCTGCTTGCCTGCAAAAATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCT 31543801 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 || ||||| ||||| ||||| || |||||| |||| | || || |||| || | Sbjct 31543802 TTATCTTGGATCTTGGCCTTCACATTTTCGATGATGTCACTGGGCTCCACCTCCAGGGGG 31543861 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 ||||| || || || |||||||| ||||| ||||||||| || Sbjct 31543862 ATGGTCTTGCCGGTTAGGGTCTTCACGAAGATCTGCATTTTG 31543903 >seq9 Length=2205763 Score = 140 bits (154), Expect = 6e-28 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||||||| || ||||||||||| ||||| ||||| || || Sbjct 1749325 CCACCCCGTAGGCGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGAC 1749384 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | ||| || || || || | || | || ||||| || || Sbjct 1749385 AGAGTACGGCCATCTTCCAGCTGTTTGCCCGCAAAAACCAGACGCTGCTGGTCAGGCGGG 1749444 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTC--TA 68412 ||||| ||||||||||| || || || ||||| ||| |||||||| | || | Sbjct 1749445 ATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCGACA 1749504 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || | ||||||||| || ||||| |||||||| || || |||||||| Sbjct 1749505 CCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 1749553 >seq7858 Length=29646629 Score = 134 bits (148), Expect = 3e-26 Identities = 158/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| ||| || || |||||||| |||||||| ||||| || || || | |||||||| Sbjct 23743194 ACCAGGTG-AGAGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 23743252 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTG-TCTTG 68371 | |||||| | ||| || ||||| || | ||||| || || ||||| ||||| || || Sbjct 23743253 AGCTGCTTGCTGGCAAAGATGAGCCTCTCCTGGTCAGGGGGGATGCCCTCCTTTATCCTG 23743312 Query 68372 AATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTT 68431 ||||| ||||| || ||||||||||| | || || |||| ||||||||| || Sbjct 23743313 GATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTT 23743372 Query 68432 TCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 | || |||||||| | ||| ||||||||| Sbjct 23743373 GCTGGTCAGGGTCTTCATGAAGATCTGCATT 23743403 Score = 111 bits (122), Expect = 3e-19 Identities = 160/226 (71%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| | ||| || | || || || ||||| ||||| ||||| || || || Sbjct 12424735 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGAC 12424794 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | |||| ||| | ||||| || || | || ||||| || || || || ||| Sbjct 12424795 AAAGTGCATCCATTTTCCAGTTGCTTGCCAGCAACGATCAGTCTCTGCTGATCAGGAGGA 12424854 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || |||||||| || |||||||| |||| || || || || || | | ||| Sbjct 12424855 ATTCCTTCCTTATCCTGAATCTTGGCCTGTACATTTTCTATTGTATCCGAGGGTTCAGGC 12424914 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCA 68460 || | ||||||||| || ||||||||||| || | ||| ||||||| Sbjct 12424915 TCGAGGGTGATGGTCTTCCCCGTGAGGGTTTTCAGGAAAATCTGCA 12424960 >seq7828 Length=21597463 Score = 125 bits (138), Expect = 1e-23 Identities = 154/209 (74%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| || ||||||||||| ||||| ||||| || || || || | ||||||||| Sbjct 10995417 ACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACAGCCATCTTCT 10995358 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | || || || || || | || | || ||||| || || ||||| |||| |||||| Sbjct 10995357 AGCTATTTGCCCGCAAAAGTCAGACACTGCTGGTCAGGCGGGATGCCCTCCTGGTCTTGG 10995298 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 || || || ||||| ||| ||||||| | || || | || ||||||||| || Sbjct 10995297 ATTTTGGCTTTGACATTCTCAGTGGTGTCACTGGGCTCGACCT-CAGGGTGATGGTCTTG 10995239 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || ||||||| ||| || || |||||||| Sbjct 10995238 CCTGTGAGGGCCTTCACAAAGATCTGCAT 10995210 >seq7782 Length=35566003 Score = 113 bits (124), Expect = 8e-20 Identities = 151/209 (72%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||| | || ||||||||| | |||| | ||| || || || || | ||| |||| Sbjct 14262503 ACCAAGAGCAGGGTGGACTCTCT--GGATATGATAGTCTGACAGAGTACGGCCAGCTTCC 14262560 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||| || || || || || || | || ||||| || || ||| | ||||||||||| Sbjct 14262561 AGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGGATGTCCTCCTTGTCTTGG 14262620 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 || || || ||||| ||| |||||||| | || || || | ||||||| | || Sbjct 14262621 ATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGTTCTTG 14262680 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| |||||||| || || |||||||| Sbjct 14262681 CCCGTCAGGGTCTTCACAAAGATCTGCAT 14262709 >seq7767 Length=50048226 Score = 105 bits (116), Expect = 1e-17 Identities = 150/209 (72%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| || |||||||||| ||||| || || || |||| || | ||||| || Sbjct 2430072 ACCAAGTGCAGGATGGACTCTTTCTGGATTTTGTAGTCTGAGAATG--CAGCCATCCTCC 2430129 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||| || | || | || || || ||||| ||||| ||||| ||||||||||| Sbjct 2430130 AGCTGTTTGCTCGCAAGAATCAGATGATGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGG 2430189 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 || || || ||||| |||| ||||||| | || |||| | | ||||| | || Sbjct 2430190 ATTTTGGCTTTGACATCCTCAGTGGTGTCATTGGGCTCAGCTTCAAGGATGATGATCTTG 2430249 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| | |||||||| || || |||||||| Sbjct 2430250 CCC-TCAGGGTCTTCACAAAGATCTGCAT 2430277 >seq7825 Length=26217151 Score = 100 bits (110), Expect = 5e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 ||||| | |||| ||| || ||||||||||| ||| | | | || ||||| | | Sbjct 9509809 AGGCGAAGCACCAGGTGCAGGGTGGACTCTTTCTGGCTACTGTGGTCTGAGAGAGCGCGG 9509750 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 ||||| || | ||| || || || || || || || |||||||| || ||||| || Sbjct 9509749 CCATCCTCCAGCTGTTTGCCCGCAAAGATCAGATGCTGCTGGTCGGGAGGGATGCCCTCT 9509690 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 |||||||| || || || |||| || || | ||||||| | || || || | |||| Sbjct 9509689 TTGTCTTGGATTTTGGCTTTGATGGTCTTGGTGGTGTCATTGGGCTCAACCTCAAGGGTG 9509630 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTG 68458 |||| || ||| | |||||||| || || |||| Sbjct 9509629 CTGGTCTTGCCCCTCAGGGTCTTCACAAAGGTCTG 9509595 >seq20 Length=2862499 Score = 87.8 bits (96), Expect = 3e-12 Identities = 151/218 (69%), Gaps = 1/218 (0%) Strand=Plus/Plus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 ||||| | ||||||||| || ||||||||||| ||||| ||||| | ||| | | Sbjct 2689016 AGGCGAAGTACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGCCTGAGGGAGCGTGG 2689075 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 ||||| || | ||| | || || | || || | || ||||| || || ||||| ||| Sbjct 2689076 CCATCCTC-AGCTGTTGGCCTGCAGAAATCAGACACTGCTGGTCAGGCGGGATGCCCTCC 2689134 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 |||||||| || || || ||||| | | |||| | || || || | |||| Sbjct 2689135 TTGTCTTGGATTTTGGCTTTGACATTTTTAACAATGTCACGGGGCTCGACCTCGAGGGTG 2689194 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || ||| | || ||||| || || |||||||| Sbjct 2689195 ATCGTCTTGCCCATCAGAGTCTTCACAAAGATCTGCAT 2689232 >seq7869 Length=26620976 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 5/230 (2%) Strand=Plus/Minus Query 68232 TTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCG 68291 || || || || ||||| | ||||||| || ||||||||||| || | ||| | || Sbjct 25200203 TTGCCACCTCGCAGGCGAAGCACCAAGTTCAGGGTGGACTCTTTCTGTACGTTGTGGTCT 25200144 Query 68292 GAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGT 68351 ||||| || | |||| || | ||| || || || || |||| || ||||| || Sbjct 25200143 GAGAGAGTGCGTCCATTGTCCAGCTGTTTGCCCGCAAAACTGAGATGCTGCTGGTCAGGC 25200084 Query 68352 GGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCT 68411 | ||| | ||||||||||| || | ||||| || |||||||| | || Sbjct 25200083 AGGATGTCCTCCTTGTCTTGGATTT-----TTGACATTTTCAATGGTGTCACTGGGCTCG 25200029 Query 68412 ACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | | | ||||||||| |||||| |||||||| || || |||||||| Sbjct 25200028 GCCTTGAGGGTGATGGTCTTTCCCACTAGGGTCTTCACAAAGATCTGCAT 25199979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921531712355840