Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq7767 114 1e-20
seq7828 105 6e-18
seq7764 93.3 4e-14
seq7857 91.5 1e-13
seq7823 91.5 1e-13
seq7858 89.7 4e-13
seq7818 82.4 6e-11
>seq7767
Length=50048226
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
||| ||||| |||||| | || | ||| | ||||| || |||||||||||||| ||
Sbjct 33066729 ACCACCACGAAGTCTCCACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGA 33066788
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
|| ||| || |||||| ||||| || ||||| |||| || | ||| || || |||||
Sbjct 33066789 CAAAGTGCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGG 33066848
Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334
||| ||||| || || |||||| |||| | ||| | || || | || || ||
Sbjct 33066849 AATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGATCAAC 33066908
Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| | ||| | || || || || || ||||| || |||||||||||
Sbjct 33066909 CTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 33066956
>seq7828
Length=21597463
Score = 105 bits (116), Expect = 6e-18
Identities = 157/223 (70%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 114160 CACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAG 114219
|||| |||||||| || | ||| | || || || |||||||||||||| || || ||
Sbjct 14213364 CACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAG 14213423
Query 114220 TACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGC 114279
||| |||||| ||||| || ||||| |||| || | ||| || || |||||||| |
Sbjct 14213424 GACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTC 14213483
Query 114280 CTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCA 114339
|||| || | |||||| |||| | ||| | || || | || ||| || || |
Sbjct 14213484 CTTCCTTATTCTGAATCTTGGCCTTTATATTTTCTATTGTATCCGAGGGTTCAACCTCGA 14213543
Query 114340 CGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| | || || || || || ||||| || |||||||||||
Sbjct 14213544 GAGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 14213586
>seq7764
Length=47977530
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
||| |||| |||||||| || | ||| | || || || ||||||||| |||| || |
Sbjct 26988198 ACCACCACAAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGCTGTAGTCACA 26988257
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
|| ||| | ||||| ||||| || |||| | |||| || | || || || |||||
Sbjct 26988258 CAAAGTTTGTCTGTCTTCCAGTTGCTTGCCAGTGAAGATCAGTC--TGCTGATCAGGAGG 26988315
Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334
||| ||||| || || ||||| |||| | ||| || || | | |||||| ||
Sbjct 26988316 AATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTACTGTACCTGAGGATTCAAC 26988375
Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| | || | || || || | || ||||| ||||||||||||||
Sbjct 26988376 CTCGAGAGTGATGGTCTTCCCCATAAGGGTTTTCACAAAAATCTGCAT 26988423
Score = 84.2 bits (92), Expect = 2e-11
Identities = 96/129 (74%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
||| ||| | |||||||| || | ||| | ||||| || |||||||||||||| ||
Sbjct 16767816 ACCACCAGGAAGTCTCAACACGAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGA 16767757
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
|| |||| | | |||| ||||| || |||| | |||| || | ||| || || |||||
Sbjct 16767756 CAAAGTATGTCCACCTTCCAGTTGCTTGCCAGTGAAGATCAGTCTCTGCTGATCGGGAGG 16767697
Query 114275 AATGCCTTC 114283
||| |||||
Sbjct 16767696 AATTCCTTC 16767688
>seq7857
Length=43258702
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
||| ||||| ||||| || || | ||| | || || || |||||| ||||||| ||
Sbjct 24178182 ACCACCACGAAGTCTTAACACAAGATGAAGAGTGGACTCCTTTTGAGTGTTGTAGTCAGA 24178123
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
|| ||| || |||||| ||||| || ||||| |||| | | ||| || || |||||
Sbjct 24178122 CAGAGTGCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCAGGAGG 24178063
Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334
||| ||||| || || |||||| |||| | || | || || | || ||| |
Sbjct 24178062 AATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTGTATTGTATCCGAGGGTTCAGC 24178003
Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| | || | || || || | |||||||| || |||||||||||
Sbjct 24178002 CTCGAGAGTGATGGTCTTCCCCATAAGAGTTTTCACGAAAATCTGCAT 24177955
>seq7823
Length=12955506
Score = 91.5 bits (100), Expect = 1e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || ||||| || ||||||||||| | ||| || |||||| || || || ||
Sbjct 3355522 GTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 3355463
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| | ||||| | ||| ||||| || || ||||| ||||| || ||||| ||
Sbjct 3355462 GCAAAAATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGGATCTTGGCCTTC 3355403
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | ||| | |||||| ||| || || |||| ||| | || ||||||||||| ||
Sbjct 3355402 ACGTTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 3355343
Query 114366 TTTACAAAAATCTGCATG 114383
|| || || |||||||||
Sbjct 3355342 TTCACGAAGATCTGCATG 3355325
>seq7858
Length=29646629
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
||| ||||| |||||||| || | ||| | ||||| || |||||||||||||| ||
Sbjct 12424734 ACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGA 12424793
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
|| ||| | || ||| ||||| || ||||| ||| || | ||| || || |||||
Sbjct 12424794 CAAAGTGCATCCATTTTCCAGTTGCTTGCCAGCAACGATCAGTCTCTGCTGATCAGGAGG 12424853
Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334
||| ||||| || || |||||| | || | ||| | || || | || |||
Sbjct 12424854 AATTCCTTCCTTATCCTGAATCTTGGCCTGTACATTTTCTATTGTATCCGAGGGTTCAGG 12424913
Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCA 114381
|| | ||| | || || || || || ||||| | ||||||||||
Sbjct 12424914 CTCGAGGGTGATGGTCTTCCCCGTGAGGGTTTTCAGGAAAATCTGCA 12424960
>seq7818
Length=84771923
Score = 82.4 bits (90), Expect = 6e-11
Identities = 158/233 (68%), Gaps = 10/233 (4%)
Strand=Plus/Minus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
||| |||| |||||||| || | ||| | || || || |||||||||||||| |
Sbjct 26785816 ACCACCACCAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGATGGA 26785757
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
|| |||||| |||| | ||||| || ||||| |||| || | ||| || || |||
Sbjct 26785756 CAAAGTACGTTCATCTCCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCACAAGG 26785697
Query 114275 AATGCCTTCTTTGTCGGCAATCT-----TTTGTTTTAGCTGTTCAACGGTGTCGGTGGAT 114329
||| |||| || || ||||| |||| || ||||| || | | || |
Sbjct 26785696 AATTTCTTCCTTATCCTGAATCTTGACCTTTGCATTGTCTGTT-----GTAGCCGAGGGT 26785642
Query 114330 TCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || || | || | || || ||||| || ||||| || |||||||||||
Sbjct 26785641 TCAACCTCAAGAGTGATAGTCTTCCCGGTAAGGGTTTTCACGAAAATCTGCAT 26785589
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420094092305664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |