Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq7767 147 4e-30
seq7786 87.8 3e-12
>seq7767
Length=50048226
Score = 147 bits (162), Expect = 4e-30
Identities = 366/550 (67%), Gaps = 17/550 (3%)
Strand=Plus/Plus
Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482
||||| ||||| || | ||| |||||||| ||||| ||| ||| |||| |
Sbjct 16036029 CTGGCTTTCTTTGCGCCGAGTGATGGCATAGTAAATGAAAACTTGGTGGAGCGGTTTAGC 16036088
Query 42483 AAAGAGGTGCAG--TACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGA 42540
|||| || ||| ||| || || ||||| ||||| ||||||| || ||||| || |
Sbjct 16036089 CAAGAAGTTCAGATTACA--GAAGCCCGCTGTTTCTATGGCTTCCGAATTGCCATGGAAA 16036146
Query 42541 ACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCCCGTCG 42597
|| | || |||||| ||||| | || |||| |||| || | ||| || |
Sbjct 16036147 ACATCCATTCTGAGATGTAC---AGTCTCCTCATTGACACTTATGTTAAAGATTCCAAAG 16036203
Query 42598 AGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACT 42657
| | | || ||||| ||| | ||||| ||||| || | ||||||||||| ||||
Sbjct 16036204 AAAGGGAATTTCTCTTCAACGCCCTCGAGACAATGCCTTGTGTAAAGAAGAAGGCAGACT 16036263
Query 42658 GGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTA 42717
|||| | | |||| | | || || || | ||| || || | || | ||||
Sbjct 16036264 GGGCCTTGCATTGGACTGGGGACAAAGAGGCTACCTACGGGGAACGGGTTGTGGACTTTG 16036323
Query 42718 CCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA 42777
| || || || || |||||||| || || | || || | || |||||||||||| |
Sbjct 16036324 CTGCTGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCGACGATATTCTGGCTCAAGAA-- 16036381
Query 42778 AGGTGTC--GATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCT 42835
| ||| | |||||| || | || || || || ||||| || ||||| || ||||| |
Sbjct 16036382 ACGTGACCTGATGCCTGGCCCCATGTTTTCCAATGAACTTATTAGCAGAGATGAGGGTTT 16036441
Query 42836 GCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGA 42895
|| | |||||||||||||| ||||| | ||||| ||||| || || ||| |
Sbjct 16036442 ACACTGTGACTTTGCCTGCCTGATGTTC---AAACACCTGGTCCACAAACCTTCCAAGCA 16036498
Query 42896 GCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTC 42955
| | || || || || | | ||||| ||| ||| ||| |||||||||| || |
Sbjct 16036499 GAGAGTGAAGGAAATAATTATTAATGCCGTTCGGATAGAGCAGGGGTTCCTCACGGAGAC 16036558
Query 42956 GCTGCCCGTG 42965
||||| ||
Sbjct 16036559 CTTGCCCCTG 16036568
>seq7786
Length=83011774
Score = 87.8 bits (96), Expect = 3e-12
Identities = 96/125 (77%), Gaps = 2/125 (2%)
Strand=Plus/Minus
Query 42706 TGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCT 42765
|||| || ||| | || || || || || ||||||||||| | || || | || ||||
Sbjct 48121275 TGGTGGCTTTTGCTGCTGTAGAAGGGATTTTCTTCTCGGGATCTTTTGCTGCTATATTCT 48121216
Query 42766 GGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGG 42824
|||| ||| | | |||| || |||||||||||||| || || || ||||||||||||||
Sbjct 48121215 GGCTAAAGAAAAGAGGTCTC-ATGCCCGGACTCACGTTTTCCAATGAACTCATCAGCAGA 48121157
Query 42825 GACGA 42829
|| ||
Sbjct 48121156 GATGA 48121152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944246277022720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |