Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_009334.1 Length=172764 Score E Sequences producing significant alignments: (Bits) Value seq7759 123 3e-23 >seq7759 Length=36627259 Score = 123 bits (136), Expect = 3e-23 Identities = 116/148 (78%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 9861 AGGGCTACCTTGGATGCCAGGCCCTGTCAGAAATGATCCAATTCTACCTGGAGGAAGTCA 9920 |||| ||||| || ||||| ||| |||| || |||||||| |||||||||||||| || | Sbjct 5668620 AGGGTTACCTGGGTTGCCAAGCCTTGTCGGAGATGATCCAGTTCTACCTGGAGGAGGTGA 5668561 Query 9921 TGCCACAGGCTGAAAACCAGGACCCTGAAGCCAAAGACCATGTAAATTCTTTGGGTGAAA 9980 |||| |||||||| ||||| ||||| | ||| || ||||| || || |||| |||| Sbjct 5668560 TGCCCCAGGCTGAGAACCACGACCCAAACATCAAGGAACATGTGAACTCCCTGGGGGAAA 5668501 Query 9981 ATCTAAAGACCCTACGGCTCCGCCTGCG 10008 | || |||||||| |||| | ||||| Sbjct 5668500 AGCTGAAGACCCTCAGGCTGAGGCTGCG 5668473 Score = 86.0 bits (94), Expect = 7e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 10080 AGCTGCAGGAAAAAGGAATTTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTACA 10139 |||| || || | ||| | ||||||||||||||||| |||||||| || || ||||||| Sbjct 5666301 AGCTCCAAGAGAGAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 5666242 Query 10140 TAGAAGCATACATGACAATTAA 10161 ||||| | ||||||||||| || Sbjct 5666241 TAGAAACCTACATGACAATGAA 5666220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552662412666880