Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_009334.1
Length=172764
Score E
Sequences producing significant alignments: (Bits) Value
seq7759 123 3e-23
>seq7759
Length=36627259
Score = 123 bits (136), Expect = 3e-23
Identities = 116/148 (78%), Gaps = 0/148 (0%)
Strand=Plus/Minus
Query 9861 AGGGCTACCTTGGATGCCAGGCCCTGTCAGAAATGATCCAATTCTACCTGGAGGAAGTCA 9920
|||| ||||| || ||||| ||| |||| || |||||||| |||||||||||||| || |
Sbjct 5668620 AGGGTTACCTGGGTTGCCAAGCCTTGTCGGAGATGATCCAGTTCTACCTGGAGGAGGTGA 5668561
Query 9921 TGCCACAGGCTGAAAACCAGGACCCTGAAGCCAAAGACCATGTAAATTCTTTGGGTGAAA 9980
|||| |||||||| ||||| ||||| | ||| || ||||| || || |||| ||||
Sbjct 5668560 TGCCCCAGGCTGAGAACCACGACCCAAACATCAAGGAACATGTGAACTCCCTGGGGGAAA 5668501
Query 9981 ATCTAAAGACCCTACGGCTCCGCCTGCG 10008
| || |||||||| |||| | |||||
Sbjct 5668500 AGCTGAAGACCCTCAGGCTGAGGCTGCG 5668473
Score = 86.0 bits (94), Expect = 7e-12
Identities = 68/82 (83%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 10080 AGCTGCAGGAAAAAGGAATTTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTACA 10139
|||| || || | ||| | ||||||||||||||||| |||||||| || || |||||||
Sbjct 5666301 AGCTCCAAGAGAGAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 5666242
Query 10140 TAGAAGCATACATGACAATTAA 10161
||||| | ||||||||||| ||
Sbjct 5666241 TAGAAACCTACATGACAATGAA 5666220
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 552662412666880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |