Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq7823 120 7e-22 seq9 109 1e-18 seq7764 104 6e-17 seq7865 102 2e-16 seq7782 100 7e-16 seq7858 96.9 8e-15 seq7818 93.3 1e-13 seq20 93.3 1e-13 seq7828 84.2 5e-11 >seq7823 Length=12955506 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || || || | || ||||| || ||||| | || || ||||| || Sbjct 3355516 TCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAA 3355457 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| || | ||||| || |||||||| ||||| || || ||||||||| Sbjct 3355456 ATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGGATCTTGGCCTTCACGTTT 3355397 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || | || || || || ||||| ||||| |||||||| ||||| ||| Sbjct 3355396 TCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACG 3355337 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 3355336 AAGATCTGCAT 3355326 >seq9 Length=2205763 Score = 109 bits (120), Expect = 1e-18 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || | || | ||| ||||| |||||||||||||| | Sbjct 1749325 CCACCCCGTAGGCGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGAC 1749384 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || ||||| | ||||| || || || | ||||||||| || | ||| Sbjct 1749385 AGAGTACGGCCATCTTCCAGCTGTTTGCCCGCAAAAACCAGACGCTGCTGGTCAGGCGGG 1749444 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC--TA 288424 || || || || || |||||||| ||||| || || || || | || || | || | Sbjct 1749445 ATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCGACA 1749504 Query 288425 CTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || ||||| ||||| || ||||| ||||| || || |||||||| Sbjct 1749505 CCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 1749553 >seq7764 Length=47977530 Score = 104 bits (114), Expect = 6e-17 Identities = 161/228 (71%), Gaps = 4/228 (2%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||||| | || ||||||| ||| || ||||| || | ||||| Sbjct 26988199 CCACCACAAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGCTGTAGTCACAC 26988258 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGAC-GCTGTTGAGAATCTGG 288365 | || ||| |||||| | ||| || || | ||||||||| | |||| | || | || Sbjct 26988259 AAAGTTTGTCTGTCTTCCAGTTGCTTGCCAGTGAAGATCAGTCTGCTGATCAGGA---GG 26988315 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 |||||||| ||||||||||| || || || || ||||||| | | | ||||| || Sbjct 26988316 AATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTACTGTACCTGAGGATTCAAC 26988375 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| |||||||| | || || || || || |||||||| Sbjct 26988376 CTCGAGAGTGATGGTCTTCCCCATAAGGGTTTTCACAAAAATCTGCAT 26988423 >seq7865 Length=68117122 Score = 102 bits (112), Expect = 2e-16 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 288284 CTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGA 288343 |||| |||| || ||||| | || || | || ||||| | || || ||||| |||| Sbjct 53671886 CTTTCCGGATGTTGTAGTCAGAAAGAATGTGGCCATCTTCCAGCTGCTTGCCTGCAAAGA 53671945 Query 288344 TCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTT 288403 | || | ||| || | ||||| ||||||||||||||| | || || |||||||| | Sbjct 53671946 TGAGCCTCTGCTGGCCACGGGGGATGCCTTCTTTATCCTGGGTCTTGGCCTTCACGTTCT 53672005 Query 288404 CTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 || | ||| || | ||| || || || ||||| ||||| | |||||| |||| | || Sbjct 53672006 TCATGGTATCACTGGGTTCCACCTCCAGGGTGATGGTCTTACAGGTCAGGATCTTCATGA 53672065 Query 288464 ATATCTGCATTATG 288477 | | ||||||| || Sbjct 53672066 AGACCTGCATTTTG 53672079 >seq7782 Length=35566003 Score = 100 bits (110), Expect = 7e-16 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 288289 TGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGA 288348 ||||||| |||||| | || || || || |||| | ||||| || || || |||||| Sbjct 14262525 TGGATATGATAGTCTGACAGAGTACGGCCAGCTTCCAGCTGTTTGCCCGCAAAAATCAGA 14262584 Query 288349 CGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATA 288408 ||||| || | ||||| | || || || |||||||| ||||| || || || || Sbjct 14262585 CGCTGCTGGTCAGGCGGGATGTCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCAATG 14262644 Query 288409 GAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATC 288468 | || || | || || ||||| ||||| |||| || ||||| ||||| || || ||| Sbjct 14262645 GTGTCACTGGGCTCAACCTCGAGGGTGATGTTCTTGCCCGTCAGGGTCTTCACAAAGATC 14262704 Query 288469 TGCAT 288473 ||||| Sbjct 14262705 TGCAT 14262709 >seq7858 Length=29646629 Score = 96.9 bits (106), Expect = 8e-15 Identities = 138/193 (72%), Gaps = 1/193 (1%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || || || | || ||||| || ||||| | || || | || ||| Sbjct 23743211 TCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCTGGCAAAG 23743270 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTC-TTTATCCTGGATTTTCGCTTTCACGTT 288401 || || | || || | ||||| || || |||||||||||| || || ||||| || Sbjct 23743271 ATGAGCCTCTCCTGGTCAGGGGGGATGCCCTCCTTTATCCTGGATCTTGGCCTTCACATT 23743330 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||| || | || || | || || || || ||||| ||||| | |||||| ||||| | Sbjct 23743331 TTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCTGGTCAGGGTCTTCAT 23743390 Query 288462 GAATATCTGCATT 288474 ||| ||||||||| Sbjct 23743391 GAAGATCTGCATT 23743403 >seq7818 Length=84771923 Score = 93.3 bits (102), Expect = 1e-13 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||||| | || ||||||| ||| || ||||| || || ||| || Sbjct 26785815 CCACCACCAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGATGGAC 26785756 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || ||| | ||| | | ||| || || || |||||||| | ||| ||| | || Sbjct 26785755 AAAGTACGTTCATCTCCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCACAAGGA 26785696 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 ||| |||| |||||||| || || | || | || ||| | | | | | ||| || Sbjct 26785695 ATTTCTTCCTTATCCTGAATCTTGACCTTTGCATTGTCTGTTGTAGCCGAGGGTTCAACC 26785636 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 || || ||||| ||||||||||| || || || ||||| ||||||||| || Sbjct 26785635 TCAAGAGTGATAGTCTTCCCGGTAAGGGTTTTCACGAAAATCTGCATTTTG 26785585 >seq20 Length=2862499 Score = 93.3 bits (102), Expect = 1e-13 Identities = 136/191 (71%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| |||||||||||| | | | | | | | || || || | |||| ||||| | Sbjct 2689043 TCTTTCTGGATATTATAGCCTGAGGGAGCGTGGCCATCCTC-AGCTGTTGGCCTGCAGAA 2689101 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||||| ||| || | ||||| || || || || |||||||| ||||| || ||| Sbjct 2689102 ATCAGACACTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTT 2689161 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 | | | || | | || || ||||| ||||||||||| || |||||||||| || Sbjct 2689162 TTAACAATGTCACGGGGCTCGACCTCGAGGGTGATCGTCTTGCCCATCAGAGTCTTCACA 2689221 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 2689222 AAGATCTGCAT 2689232 >seq7828 Length=21597463 Score = 84.2 bits (92), Expect = 5e-11 Identities = 134/191 (70%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| |||||||||||||| | || || | || ||||||| | ||| || || || Sbjct 10995399 TCTTTCTGGATATTATAGTCTGACAGAGTACAGCCATCTTCTAGCTATTTGCCCGCAAAA 10995340 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||||| ||| || | ||||| || || | || |||||||| ||||| || || Sbjct 10995339 GTCAGACACTGCTGGTCAGGCGGGATGCCCTCCTGGTCTTGGATTTTGGCTTTGACATTC 10995280 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || | | || || | || || || || ||||| ||||| || || || | ||| || Sbjct 10995279 TCAGTGGTGTCACTGGGCTCGACCTC-AGGGTGATGGTCTTGCCTGTGAGGGCCTTCACA 10995221 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 10995220 AAGATCTGCAT 10995210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179535420057216