Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq7823 120 7e-22
seq9 109 1e-18
seq7764 104 6e-17
seq7865 102 2e-16
seq7782 100 7e-16
seq7858 96.9 8e-15
seq7818 93.3 1e-13
seq20 93.3 1e-13
seq7828 84.2 5e-11
>seq7823
Length=12955506
Score = 120 bits (132), Expect = 7e-22
Identities = 141/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| ||||| || || || | || ||||| || ||||| | || || ||||| ||
Sbjct 3355516 TCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAA 3355457
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| || | ||| || | ||||| || |||||||| ||||| || || |||||||||
Sbjct 3355456 ATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGGATCTTGGCCTTCACGTTT 3355397
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || | || || || || ||||| ||||| |||||||| ||||| |||
Sbjct 3355396 TCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACG 3355337
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 3355336 AAGATCTGCAT 3355326
>seq9
Length=2205763
Score = 109 bits (120), Expect = 1e-18
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | ||| || | || | ||| ||||| |||||||||||||| |
Sbjct 1749325 CCACCCCGTAGGCGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGAC 1749384
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || || ||||| | ||||| || || || | ||||||||| || | |||
Sbjct 1749385 AGAGTACGGCCATCTTCCAGCTGTTTGCCCGCAAAAACCAGACGCTGCTGGTCAGGCGGG 1749444
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC--TA 288424
|| || || || || |||||||| ||||| || || || || | || || | || |
Sbjct 1749445 ATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCGACA 1749504
Query 288425 CTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
| || || ||||| ||||| || ||||| ||||| || || ||||||||
Sbjct 1749505 CCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 1749553
>seq7764
Length=47977530
Score = 104 bits (114), Expect = 6e-17
Identities = 161/228 (71%), Gaps = 4/228 (2%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| | ||||| | || ||||||| ||| || ||||| || | |||||
Sbjct 26988199 CCACCACAAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGCTGTAGTCACAC 26988258
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGAC-GCTGTTGAGAATCTGG 288365
| || ||| |||||| | ||| || || | ||||||||| | |||| | || | ||
Sbjct 26988259 AAAGTTTGTCTGTCTTCCAGTTGCTTGCCAGTGAAGATCAGTCTGCTGATCAGGA---GG 26988315
Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
|||||||| ||||||||||| || || || || ||||||| | | | ||||| ||
Sbjct 26988316 AATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTACTGTACCTGAGGATTCAAC 26988375
Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| ||||| |||||||| | || || || || || ||||||||
Sbjct 26988376 CTCGAGAGTGATGGTCTTCCCCATAAGGGTTTTCACAAAAATCTGCAT 26988423
>seq7865
Length=68117122
Score = 102 bits (112), Expect = 2e-16
Identities = 139/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 288284 CTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGA 288343
|||| |||| || ||||| | || || | || ||||| | || || ||||| ||||
Sbjct 53671886 CTTTCCGGATGTTGTAGTCAGAAAGAATGTGGCCATCTTCCAGCTGCTTGCCTGCAAAGA 53671945
Query 288344 TCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTT 288403
| || | ||| || | ||||| ||||||||||||||| | || || |||||||| |
Sbjct 53671946 TGAGCCTCTGCTGGCCACGGGGGATGCCTTCTTTATCCTGGGTCTTGGCCTTCACGTTCT 53672005
Query 288404 CTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463
|| | ||| || | ||| || || || ||||| ||||| | |||||| |||| | ||
Sbjct 53672006 TCATGGTATCACTGGGTTCCACCTCCAGGGTGATGGTCTTACAGGTCAGGATCTTCATGA 53672065
Query 288464 ATATCTGCATTATG 288477
| | ||||||| ||
Sbjct 53672066 AGACCTGCATTTTG 53672079
>seq7782
Length=35566003
Score = 100 bits (110), Expect = 7e-16
Identities = 133/185 (72%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 288289 TGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGA 288348
||||||| |||||| | || || || || |||| | ||||| || || || ||||||
Sbjct 14262525 TGGATATGATAGTCTGACAGAGTACGGCCAGCTTCCAGCTGTTTGCCCGCAAAAATCAGA 14262584
Query 288349 CGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATA 288408
||||| || | ||||| | || || || |||||||| ||||| || || || ||
Sbjct 14262585 CGCTGCTGGTCAGGCGGGATGTCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCAATG 14262644
Query 288409 GAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATC 288468
| || || | || || ||||| ||||| |||| || ||||| ||||| || || |||
Sbjct 14262645 GTGTCACTGGGCTCAACCTCGAGGGTGATGTTCTTGCCCGTCAGGGTCTTCACAAAGATC 14262704
Query 288469 TGCAT 288473
|||||
Sbjct 14262705 TGCAT 14262709
>seq7858
Length=29646629
Score = 96.9 bits (106), Expect = 8e-15
Identities = 138/193 (72%), Gaps = 1/193 (1%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| ||||| || || || | || ||||| || ||||| | || || | || |||
Sbjct 23743211 TCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCTGGCAAAG 23743270
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTC-TTTATCCTGGATTTTCGCTTTCACGTT 288401
|| || | || || | ||||| || || |||||||||||| || || ||||| ||
Sbjct 23743271 ATGAGCCTCTCCTGGTCAGGGGGGATGCCCTCCTTTATCCTGGATCTTGGCCTTCACATT 23743330
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
||| || | || || | || || || || ||||| ||||| | |||||| ||||| |
Sbjct 23743331 TTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCTGGTCAGGGTCTTCAT 23743390
Query 288462 GAATATCTGCATT 288474
||| |||||||||
Sbjct 23743391 GAAGATCTGCATT 23743403
>seq7818
Length=84771923
Score = 93.3 bits (102), Expect = 1e-13
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| | ||||| | || ||||||| ||| || ||||| || || ||| ||
Sbjct 26785815 CCACCACCAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGATGGAC 26785756
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || ||| | ||| | | ||| || || || |||||||| | ||| ||| | ||
Sbjct 26785755 AAAGTACGTTCATCTCCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCACAAGGA 26785696
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
||| |||| |||||||| || || | || | || ||| | | | | | ||| ||
Sbjct 26785695 ATTTCTTCCTTATCCTGAATCTTGACCTTTGCATTGTCTGTTGTAGCCGAGGGTTCAACC 26785636
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477
|| || ||||| ||||||||||| || || || ||||| ||||||||| ||
Sbjct 26785635 TCAAGAGTGATAGTCTTCCCGGTAAGGGTTTTCACGAAAATCTGCATTTTG 26785585
>seq20
Length=2862499
Score = 93.3 bits (102), Expect = 1e-13
Identities = 136/191 (71%), Gaps = 1/191 (1%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| |||||||||||| | | | | | | | || || || | |||| ||||| |
Sbjct 2689043 TCTTTCTGGATATTATAGCCTGAGGGAGCGTGGCCATCCTC-AGCTGTTGGCCTGCAGAA 2689101
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||||| ||| || | ||||| || || || || |||||||| ||||| || |||
Sbjct 2689102 ATCAGACACTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTT 2689161
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
| | | || | | || || ||||| ||||||||||| || |||||||||| ||
Sbjct 2689162 TTAACAATGTCACGGGGCTCGACCTCGAGGGTGATCGTCTTGCCCATCAGAGTCTTCACA 2689221
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 2689222 AAGATCTGCAT 2689232
>seq7828
Length=21597463
Score = 84.2 bits (92), Expect = 5e-11
Identities = 134/191 (70%), Gaps = 1/191 (1%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| |||||||||||||| | || || | || ||||||| | ||| || || ||
Sbjct 10995399 TCTTTCTGGATATTATAGTCTGACAGAGTACAGCCATCTTCTAGCTATTTGCCCGCAAAA 10995340
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|||||| ||| || | ||||| || || | || |||||||| ||||| || ||
Sbjct 10995339 GTCAGACACTGCTGGTCAGGCGGGATGCCCTCCTGGTCTTGGATTTTGGCTTTGACATTC 10995280
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| | | || || | || || || || ||||| ||||| || || || | ||| ||
Sbjct 10995279 TCAGTGGTGTCACTGGGCTCGACCTC-AGGGTGATGGTCTTGCCTGTGAGGGCCTTCACA 10995221
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 10995220 AAGATCTGCAT 10995210
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179535420057216
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |