Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq7823 125 7e-24 seq7767 123 2e-23 seq7857 122 9e-23 seq7846 116 4e-21 seq7858 111 2e-19 seq7828 111 2e-19 seq7865 91.5 1e-13 seq9 91.5 1e-13 seq7818 89.7 5e-13 seq7764 86.0 6e-12 >seq7823 Length=12955506 Score = 125 bits (138), Expect = 7e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || ||||| || ||||||||||| | | ||||| | ||||| ||||||||||| Sbjct 3355522 GTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 3355463 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| ||||||||| ||||||||| || || || || ||||| ||||| || || ||| Sbjct 3355462 GCAAAAATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGGATCTTGGCCTTC 3355403 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | || |||| || ||||| || | || | |||||||||||||| || Sbjct 3355402 ACGTTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 3355343 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 3355342 TTCACGAAGATCTGCAT 3355326 Score = 114 bits (126), Expect = 1e-20 Identities = 150/210 (71%), Gaps = 10/210 (5%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| ||||| || ||||||||||| | | ||||| | ||||| ||||||||||| Sbjct 3355294 GTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 3355235 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | ||||||| ||||||||| || || || || ||||| ||||| || || ||| Sbjct 3355234 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGGATCTTGGCCTTC 3355175 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCG--------- 64417 ||| || | || |||| || ||||| || | || | ||||||||| Sbjct 3355174 ACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCNNNNNNNNNN 3355115 Query 64418 -GTCAAAGTTTTTACGAAAATTTGCATTTT 64446 ||||| || || ||||| || |||||||| Sbjct 3355114 AGTCAAGGTCTTCACGAAGATCTGCATTTT 3355085 >seq7767 Length=50048226 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | ||| ||| ||||||| || || || |||||||||||||| || | Sbjct 33066729 ACCACCACGAAGTCTCCACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGA 33066788 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | ||||| || |||||||| ||| | || || | |||||| || ||||| Sbjct 33066789 CAAAGTGCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGG 33066848 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||||||||| || || || || || ||||||| || | |||||| || || || Sbjct 33066849 AATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGATCAAC 33066908 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || | || | |||||| || || | ||||| |||||||| ||||| || Sbjct 33066909 CTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATCTT 33066959 >seq7857 Length=43258702 Score = 122 bits (134), Expect = 9e-23 Identities = 147/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| ||||| || ||||| ||||| | | ||||| | ||||| ||||||||||| Sbjct 31543703 GTCGACTCTTTCTGGATGTTATAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 31543762 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| ||||||||| ||||||||| || || || || ||||| ||||| || || ||| Sbjct 31543763 GCAAAAATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGGATCTTGGCCTTC 31543822 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | | |||| || ||||| || | | | |||||||||||| | || Sbjct 31543823 ACATTTTCGATGATGTCACTGGGCTCCACCTCCAGGGGGATGGTCTTGCCGGTTAGGGTC 31543882 Query 64427 TTTACGAAAATTTGCATTTT 64446 || ||||| || |||||||| Sbjct 31543883 TTCACGAAGATCTGCATTTT 31543902 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | ||| | ||| ||||||| || || || |||||| ||||||| || | Sbjct 24178182 ACCACCACGAAGTCTTAACACAAGATGAAGAGTGGACTCCTTTTGAGTGTTGTAGTCAGA 24178123 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | ||||| || |||||||| ||| | || | | |||||| || ||||| Sbjct 24178122 CAGAGTGCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCAGGAGG 24178063 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||||||||| || || || || || ||||||| | | |||||| || || | Sbjct 24178062 AATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTGTATTGTATCCGAGGGTTCAGC 24178003 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || | ||| | |||||| || | | |||||| |||||||| ||||| || Sbjct 24178002 CTCGAGAGTGATGGTCTTCCCCATAAGAGTTTTCACGAAAATCTGCATCTT 24177952 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || ||||| || || |||||||| | | ||||| | ||||| | |||||||| | Sbjct 31543475 GTTGACTCTTTCTGGATATTGTAATCAGAAAGAGTGCGGCCATCTTCCATCTGCTTGCTG 31543534 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| ||||||||| || || || || ||||| | ||| || || ||| Sbjct 31543535 GCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATATTGGATATTCGCCTTC 31543594 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || |||| || ||||| || | || | |||||||||||| | || Sbjct 31543595 ACATTTTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTTAGGGTC 31543654 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 31543655 TTCACGAAGATCTGCAT 31543671 >seq7846 Length=12828309 Score = 116 bits (128), Expect = 4e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| |||| | ||||||| |||| || ||||| || ||| Sbjct 9163039 GTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGCCCGTCCTCCAGCTGTTTCCCG 9163098 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || | || |||||||||||| || || || ||||| || || || || ||| Sbjct 9163099 GCAAAGATCAACCTCTGCTGGTCGGGGGGGATGCCCTCTTTGTCCTGGATCTTCGCCTTG 9163158 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | || |||| || ||||| || | || | |||||| |||||||| || Sbjct 9163159 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAAGGTC 9163218 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 9163219 TTCACGAAGATCTGCAT 9163235 >seq7858 Length=29646629 Score = 111 bits (122), Expect = 2e-19 Identities = 147/203 (72%), Gaps = 1/203 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| ||||| || ||||||||||| | | ||||| | ||||| |||||||||| | Sbjct 23743205 GTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCTG 23743264 Query 64307 GCATAAATGAGCCGCTGCTGGTC-GGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTT 64365 ||| | ||||||| || |||||| ||| ||| ||| |||| || || || || ||| Sbjct 23743265 GCAAAGATGAGCCTCTCCTGGTCAGGGGGGATGCCCTCCTTTATCCTGGATCTTGGCCTT 23743324 Query 64366 TACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 ||| || | || |||| || ||||| || | || | |||||||| ||||| || Sbjct 23743325 CACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCTGGTCAGGGT 23743384 Query 64426 TTTTACGAAAATTTGCATTTTAA 64448 || | ||| || ||||||| || Sbjct 23743385 CTTCATGAAGATCTGCATTTCAA 23743407 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | ||| | ||| ||||||| || || || |||||||||||||| || | Sbjct 12424734 ACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGA 12424793 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||| | | ||| || |||||||| ||| || || | |||||| || ||||| Sbjct 12424794 CAAAGTGCATCCATTTTCCAGTTGCTTGCCAGCAACGATCAGTCTCTGCTGATCAGGAGG 12424853 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||||||||| || || || || || || |||| || | |||||| || || Sbjct 12424854 AATTCCTTCCTTATCCTGAATCTTGGCCTGTACATTTTCTATTGTATCCGAGGGTTCAGG 12424913 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCA 64442 || | || | |||||| || || | ||||| | |||||| |||| Sbjct 12424914 CTCGAGGGTGATGGTCTTCCCCGTGAGGGTTTTCAGGAAAATCTGCA 12424960 >seq7828 Length=21597463 Score = 111 bits (122), Expect = 2e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287 ||| | ||| ||||||| || || || |||||||||||||| || | | | || | Sbjct 14213371 TCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGGACGTCC 14213430 Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347 ||||| || |||||||| ||| | || || | |||||| || |||||||||||||| || Sbjct 14213431 ATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTT 14213490 Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407 | || || || ||||| | || | |||||| || || || || | ||| | Sbjct 14213491 ATTCTGAATCTTGGCCTTTATATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGAT 14213550 Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 |||||| || || | ||||| |||||||| ||||| || Sbjct 14213551 GGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATCTT 14213589 >seq7865 Length=68117122 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/191 (72%), Gaps = 4/191 (2%) Strand=Plus/Minus Query 64254 CTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAA 64313 |||| || ||||||||||| | | | || | | ||||| ||||||||||| ||| | | Sbjct 16996645 CTTTCTGGATGTTGTAATCAGAAAAG-TGAGGCCATCTTCCAGCTGCTTGCCTGCAAAGA 16996587 Query 64314 TGAGCCGCTGCTGGTC-GGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 |||||| ||||||||| | | | | | |||||||| ||||| || || ||| ||| | Sbjct 16996586 TGAGCCTCTGCTGGTCAGAGGGTACTGCCTTCTTTATCTTGGATCTTAGCCTTCACATTC 16996527 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 | | || ||| || ||||| |||| ||| | ||||||| |||| ||| | || Sbjct 16996526 TTGATGGTGTCAATGGGTTCCACCTCTAGAGTGATAGTCTTGCTGGTC--AGTCCTCACA 16996469 Query 64433 AAAATTTGCAT 64443 || || ||||| Sbjct 16996468 AACATCTGCAT 16996458 >seq9 Length=2205763 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/216 (70%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 |||||| | || | || || ||||| || || || || |||| | || || | || Sbjct 1749339 AAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCATC 1749398 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| ||||| ||||| ||| ||| || ||||||||||| || || || || || || || Sbjct 1749399 TTCCAGCTGTTTGCCCGCAAAAACCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTC 1749458 Query 64351 TTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTC--CACTTCTACAGTTAC 64407 ||| | |||| ||||| ||| ||| | || |||| || || ||| || | || | Sbjct 1749459 TTGGA-TTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCGACACCTCAAGGGTGAT 1749517 Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||||||| |||| || || || || || ||||| Sbjct 1749518 GGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 1749553 >seq7818 Length=84771923 Score = 89.7 bits (98), Expect = 5e-13 Identities = 153/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287 ||| | ||| ||||||| || || || |||||||||||||| | | || || | Sbjct 26785804 TCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGATGGACAAAGTACGTTC 26785745 Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347 ||| | || |||||||| ||| | || || | |||||| || ||||||| |||| || Sbjct 26785744 ATCTCCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCACAAGGAATTTCTTCCTT 26785685 Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407 || || || || |||| || || |||| | || || || || | ||| | Sbjct 26785684 ATCCTGAATCTTGACCTTTGCATTGTCTGTTGTAGCCGAGGGTTCAACCTCAAGAGTGAT 26785625 Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTTAAT 64449 ||||| ||||| | ||||| |||||||| |||||||| || Sbjct 26785624 AGTCTTCCCGGTAAGGGTTTTCACGAAAATCTGCATTTTGAT 26785583 >seq7764 Length=47977530 Score = 86.0 bits (94), Expect = 6e-12 Identities = 151/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287 ||| | ||| ||||||| || || || ||||||||| |||| || | || | Sbjct 26988210 TCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGCTGTAGTCACACAAAGTTTGTCT 26988269 Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347 |||||| || |||||||| | | || || | ||||| || |||||||||||||| || Sbjct 26988270 GTCTTCCAGTTGCTTGCCAGTGAAGATCAGTC--TGCTGATCAGGAGGAATTCCTTCCTT 26988327 Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407 || || || || ||||||| || |||||| | || || || || | ||| | Sbjct 26988328 ATCCTGGATCTTGGCCTTTACATTTTCTACTGTACCTGAGGATTCAACCTCGAGAGTGAT 26988387 Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 |||||| || | | ||||| || ||||| ||||| || Sbjct 26988388 GGTCTTCCCCATAAGGGTTTTCACAAAAATCTGCATCTT 26988426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499595634951680