Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq7767 104 2e-17
seq9 100 3e-16
seq7857 86.0 6e-12
seq7828 82.4 7e-11
seq7823 82.4 7e-11
>seq7767
Length=50048226
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943
|| ||||| || | || | |||| | ||| | |||||||| |||||||| ||||| ||
Sbjct 33066727 GCACCACCACGAAGTCTCCACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCA 33066786
Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003
|| ||||| ||| || || || || ||||| |||||| || ||||||||| |||
Sbjct 33066787 GACAAAGTGCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGA 33066846
Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063
|| || || ||||| ||| || || ||| | | ||| | || |||| ||
Sbjct 33066847 GGAATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGATCA 33066906
Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| |||| ||| | || || || || || ||||| || |||||||||||
Sbjct 33066907 ACCTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 33066956
>seq9
Length=2205763
Score = 100 bits (110), Expect = 3e-16
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| |||| || | |||||| || | || |||||||| || ||||| || || |
Sbjct 1749325 CCACCCCGTAGGCGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGAC 1749384
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || || ||| || |||||||| || || | | || |||||||| || || ||
Sbjct 1749385 AGAGTACGGCCATCTTCCAGCTGTTTGCCCGCAAAAACCAGACGCTGCTGGTCAGGCGGG 1749444
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG--A 127064
|||||||||||||| |||||| |||| | || | |||||| | |||| |
Sbjct 1749445 ATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCGACA 1749504
Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
| || | ||| | || ||||| ||||| || || ||||| ||||||||
Sbjct 1749505 CCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 1749553
>seq7857
Length=43258702
Score = 86.0 bits (94), Expect = 6e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943
|| ||||| || | || ||||| | ||| | || ||||| |||||| | ||||| ||
Sbjct 24178184 GCACCACCACGAAGTCTTAACACAAGATGAAGAGTGGACTCCTTTTGAGTGTTGTAGTCA 24178125
Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003
|| ||||| ||| || || || || ||||| ||||||||| ||||||||| |||
Sbjct 24178124 GACAGAGTGCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCAGGA 24178065
Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063
|| || || ||||| ||| || || ||| | | || | || |||| ||
Sbjct 24178064 GGAATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTGTATTGTATCCGAGGGTTCA 24178005
Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
| |||| || | || || || | |||||||| || |||||||||||
Sbjct 24178004 GCCTCGAGAGTGATGGTCTTCCCCATAAGAGTTTTCACGAAAATCTGCAT 24177955
>seq7828
Length=21597463
Score = 82.4 bits (90), Expect = 7e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943
|| ||| | || | || |||||| | ||| | || ||||| |||||||| ||||| ||
Sbjct 14213357 GCACCATCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCA 14213416
Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003
|| | || ||| || || || || ||||| |||||| || ||||||||| |||
Sbjct 14213417 GACAAAGGACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGA 14213476
Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063
|| || || ||||| | | || || ||| | | ||| | || |||| ||
Sbjct 14213477 GGAATTCCTTCCTTATTCTGAATCTTGGCCTTTATATTTTCTATTGTATCCGAGGGTTCA 14213536
Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| |||| || | || || || || || ||||| || |||||||||||
Sbjct 14213537 ACCTCGAGAGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 14213586
>seq7823
Length=12955506
Score = 82.4 bits (90), Expect = 7e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| |||||||| || || |||||||| | ||||| ||| || ||||| || ||
Sbjct 3355522 GTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 3355463
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| | || | | |||||| || || || |||||||| || || ||| || |||
Sbjct 3355462 GCAAAAATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGGATCTTGGCCTTC 3355403
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | ||||| |||||| | ||| || || | ||| | || ||||||||||| ||
Sbjct 3355402 ACGTTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 3355343
Query 127097 TTTACAAAAATCTGCATG 127114
|| || || |||||||||
Sbjct 3355342 TTCACGAAGATCTGCATG 3355325
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475454010721280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |