Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_012783.2
Length=226205
Score E
Sequences producing significant alignments: (Bits) Value
seq7759 159 5e-34
seq7806 109 8e-19
>seq7759
Length=36627259
Score = 159 bits (176), Expect = 5e-34
Identities = 216/301 (72%), Gaps = 0/301 (0%)
Strand=Plus/Plus
Query 8875 AACTCGGAACGCGGCCAACGGACATCCCTTCACATTGGCACAAATGAGGGACTGAATGGT 8934
||| | |||||| | || ||||| |||||||| || || ||||| |||||||| |
Sbjct 19736887 AACACTGAACGCAGTAAAAGGACAGCCCTTCACGTTATTGCAGATGAGAGACTGAATTGA 19736946
Query 8935 TGCGGTTTTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGC 8994
|| || || | ||| | || ||||| || || || || ||||| || |||||||| |
Sbjct 19736947 GGCAGTGTTGATGATTTTAAAGCCTACTTCTCCACCAAAAGTGCTAGGCTTCCAGTAGTC 19737006
Query 8995 CGGGGAGCAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGAT 9054
|| || |||||| || |||| || ||||||||||| || || || |||| || |
Sbjct 19737007 AGGTGAACAGATGGGATTACCCATAAGTCCTTTCAAGGAGAATGGCGCTCCCATTTCTAC 19737066
Query 9055 GATGCTCTCACCGAAGATGGCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAGAG 9114
||| ||||||| ||||||||| | ||||| || ||||| | | || | | | || ||
Sbjct 19737067 CATGGTCTCACCAAAGATGGCATCTGGACGAGGCTTTTCTAGCAGGAGGGCGGGATACAG 19737126
Query 9115 TTCGACAGCCTCGACGTCGCCATAGAGGGCTTCCAACTCGGCAGCTATCTCCTTCTCACC 9174
||| | || || | || ||||| ||||| || ||| | ||||| || |||||||| ||
Sbjct 19737127 TTCCATGGCATCAATATCACCATAAAGGGCCTCTAACCCCGCAGCCATTTCCTTCTCTCC 19737186
Query 9175 T 9175
|
Sbjct 19737187 T 19737187
Score = 150 bits (166), Expect = 3e-31
Identities = 172/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 9739 GTTTGAAACAACTGCTCGTCACCCCATTCCGGGTGTTCGTGTTTGAGAACATCGCAGACC 9798
|| || || | | |||| ||| |||| || || || || ||||| || ||||| |||||
Sbjct 19738527 GTCTGGAATAGCCGCTCATCATCCCACTCTGGATGCTCCTGTTTAAGCACATCACAGACT 19738586
Query 9799 CTGTTGTGTTCTCTCAGCCATATGGTGGCGTACATCATTAAACCCGGCACTAAACCAAAC 9858
||||||||||| | ||||| || |||||||||||||| | ||| ||||| | || ||
Sbjct 19738587 CTGTTGTGTTCCCGTAGCCAAATTGTGGCGTACATCATCAGACCAGGCACCAGCCCGAAG 19738646
Query 9859 ACTTCATTCCCCACTGCAAAGCGCAGATCATCGGGCACTTCGGGCGCATACAGCATATGC 9918
||||| | ||||| ||||| || || | || || | | ||| | || | ||| | |
Sbjct 19738647 ACTTCCTGGCCCACAGCAAACCGTAGGTGTTCAGGAATATGGGGTGGGTAGATCATCTCC 19738706
Query 9919 ACCTGGGTCTCTTTGACGGTGGGGGGATACATTTCACCGTCAATAACCTGA 9969
||||| || |||||||| ||||| ||||||| || || ||||| ||||||
Sbjct 19738707 ACCTGAGTATCTTTGACTGTGGGAGGATACACCTCTCCATCAATTACCTGA 19738757
Score = 122 bits (134), Expect = 1e-22
Identities = 133/177 (75%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 10121 TCTTACCCCATGCCCCAATCCTGTCGTGAAAGCCGGTCCTCGCACCATATCGGTCCTAAA 10180
|||||||||||| |||| |||| | |||||||| || |||||| ||| ||| | ||
Sbjct 19739569 TCTTACCCCATGGCCCAGTCCTTTGGTGAAAGCTGGCCCTCGCTTATGATCTGTCTTGAA 19739628
Query 10181 AAATTGGTGTGTAAAGTGTTGCCCGAAAAAAGCGAACATCAGGTTGGTGCCCTGGGGATC 10240
||| || || || ||||| || | || || || ||||||| || ||||||||||||||
Sbjct 19739629 AAACTGATGGGTGAAGTGCTGGGCAAAGAATGCAAACATCATATTTGTGCCCTGGGGATC 19739688
Query 10241 GGGGATAAAGGTCCTCCGAATAAAAACTTTGTCCACAATCTGTGTTGAATCGGGCAG 10297
|| || || | || | | || || ||| |||||||||| | |||||||||| ||
Sbjct 19739689 AGGAATGAACTTTCTTCTTAGAAGAAATTTTTCCACAATCTCTTTTGAATCGGGAAG 19739745
Score = 113 bits (124), Expect = 7e-20
Identities = 115/150 (77%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 10387 TCACCTTTCACCCCGAGAGGAGTAGGGCAGTCACGAGGAACCGGAGGCAGAGTTCTCGTA 10446
||||||||||| || | || || || |||||| || || || || |||| ||| |||
Sbjct 19740180 TCACCTTTCACACCCATGGGTGTTGGACAGTCATCAGCCACAGGGGGAAGAGCTCTGGTA 19740239
Query 10447 TAATAGGATAGATTCGAAAATGCTTCCCAGCTATTGTAGCCATAATCTAAGTTGTAGAGC 10506
|||||||| ||||| ||||| ||||||||||| || |||||||| || | |||||
Sbjct 19740240 TAATAGGAGAGATTAGAAAAGGCTTCCCAGCTTTTATAGCCATAGTCCACATTGTAAGTT 19740299
Query 10507 GGGGGACTGTCAATCATCTCGGACCTGGCT 10536
|| ||||| ||||||| | |||||||||
Sbjct 19740300 GGTGGACTCTCAATCAAATGTGACCTGGCT 19740329
Score = 109 bits (120), Expect = 8e-19
Identities = 197/286 (69%), Gaps = 4/286 (1%)
Strand=Plus/Plus
Query 9436 CCGGCAATCTGTCTAGTGAACGATTCAACTAATTGGGCTATTCCGTGCTTGATGAGGATG 9495
||||||||||| || |||| ||||| || || |||| | || || | | | ||
Sbjct 19737924 CCGGCAATCTGCCTGCTGAATGATTCCACAAACTGGGTAAGCCCATGTTCCAGCAATATA 19737983
Query 9496 GAATTGTTGTAAACGAAGTGTTCGTAACCATACTTCGCGTCGCCTATGCGAAAATCATCA 9555
|| |||||||| | || || | | || |||| | ||| |||| | || |||
Sbjct 19737984 GAGTTGTTGTAGATAAACTGCTGGAAATTGTACTCCTGGTCATCTATTTGCAAGGTGTCA 19738043
Query 9556 GGCAACAGAGAATGCCAGCGGTAGAGGGTATTGAACTCGGCCGCTATTCGGTTCTGGTAC 9615
|||| || | ||||||| ||||||| || || ||||| || || || ||||| ||||||
Sbjct 19738044 GGCAGAAGGGGATGCCAGTGGTAGAGTGTGTTAAACTCAGCAGCAATACGGTTTTGGTAC 19738103
Query 9616 TGAAA--GGCGGTACCGAACAGTAACTCCGGGTCAAAGATTAGCTGGAAGTGGTACCCGC 9673
|| || | ||| ||| || | ||| |||||||| | |||| ||||| || ||||
Sbjct 19738104 TGGAACTGTTGGT--TGAAAAGCAGCTCTGGGTCAAATTTCAGCTTGAAGTAATAGCCGC 19738161
Query 9674 TGAGTTGCTGGACATACTGTGTGATTATAATGTTAATGGTTTCCCC 9719
| | ||||| || || | | || | ||| ||||||||||| ||
Sbjct 19738162 TCAAGTGCTGTACGTAGTCTTCAATCACAATCTTAATGGTTTCTCC 19738207
>seq7806
Length=37070314
Score = 109 bits (120), Expect = 8e-19
Identities = 172/244 (70%), Gaps = 2/244 (1%)
Strand=Plus/Plus
Query 8933 GTTGCGGTTTTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTAC 8992
|| || || || || || | ||||| | || || ||||| ||||| || |||||||||
Sbjct 10371786 GTGGCTGTCTTGACCATATTGAAACCCATCTCACCACCGAATGTGCTCGGCTTCCAGTAC 10371845
Query 8993 GCCGGGGAGCAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCG 9052
| || ||||||||| ||| | | ||| || || | |||||| |||||||| | ||
Sbjct 10371846 TCTGGAGAGCAGATGGGATTCCCTAGGAGGCCCTTGAGGGAAAAGGGAGCCCCAATTTCT 10371905
Query 9053 ATGATGCTCTCACCGAAGATGGCACCGGGACGCGGTTTTTCGACGATGAAGCCA-GTGTA 9111
|| || ||||| || ||||||| ||| | || || | || | |||| | |||
Sbjct 10371906 ATCATACTCTCCCCAAAGATGGAGTTTGGATGGCACTTCTCCA-GAAGCAGCCCCGGGTA 10371964
Query 9112 GAGTTCGACAGCCTCGACGTCGCCATAGAGGGCTTCCAACTCGGCAGCTATCTCCTTCTC 9171
|| || | || |||| || ||||| || | ||||||||||| || |||||||||||
Sbjct 10371965 GAACTCCAAGGCATCGATGTGTCCATACAGCTCCTCCAACTCGGCTGCGATCTCCTTCTC 10372024
Query 9172 ACCT 9175
|||
Sbjct 10372025 CCCT 10372028
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 723656785164800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |