Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq7846 143 3e-29 seq9 113 5e-20 seq7823 100 3e-16 seq7857 96.9 4e-15 seq7782 95.1 1e-14 seq7764 87.8 2e-12 >seq7846 Length=12828309 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| || || |||| |||| |||| || |||||| ||||| |||||||| || Sbjct 9163009 CCTCCCCTCAAGCGCAGGACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCTGAC 9163068 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || |||||| |||| || ||||| || ||||| || ||||| | ||||||||||| || Sbjct 9163069 AGGGTGCGCCCGTCCTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCGGGGGGG 9163128 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || ||| |||||| ||||||| ||||| || | | ||||| || | ||||| Sbjct 9163129 ATGCCCTCTTTGTCCTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACC 9163188 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| |||||||| || || |||| || || || ||||| ||||| Sbjct 9163189 TCCAGGGTGATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCAT 9163235 >seq9 Length=2205763 Score = 113 bits (124), Expect = 5e-20 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || | || || | ||||| |||| || ||| || |||||||| ||||| | Sbjct 1749323 TGCCACCCCGTAGGCGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTG 1749382 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | ||||| || | || || ||||| ||||| || || | || ||||||||||| | || Sbjct 1749383 ACAGAGTACGGCCATCTTCCAGCTGTTTGCCCGCAAAAACCAGACGCTGCTGGTCAGGCG 1749442 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTC-- 46542 | | || ||||||||| ||| || |||| || | | ||||| || | || Sbjct 1749443 GGATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCGA 1749502 Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || | |||||||| ||||||||||| || || |||||||| ||||| Sbjct 1749503 CACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 1749553 >seq7823 Length=12955506 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425 ||| || || | ||| | ||||| || | || ||| || ||||| ||||| || || Sbjct 3355553 GCCACCCCTCAGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGA 3355494 Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485 |||||||| | || || ||||||||||| || || || | | ||||||||| | || Sbjct 3355493 AAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAAATGAGCCTCTGCTGGTCAGGGGG 3355434 Query 46486 CACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 46545 | || ||| || || |||||| ||| | | | | ||||| || | ||||| Sbjct 3355433 GATGCCCTCTTTATCTTGGATCTTGGCCTTCACGTTTTCGATGGTGTCACTGGGCTCCAC 3355374 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| |||||||| ||||| ||||| || || || ||||| ||||| Sbjct 3355373 CTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 3355326 Score = 87.8 bits (96), Expect = 2e-12 Identities = 164/243 (67%), Gaps = 10/243 (4%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || || | |||| ||||| |||| || ||| || ||||| ||||| || | Sbjct 3355326 TGCCACCCCTCAGGCGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAG 3355267 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | |||||||| | || || ||||||||||| || || || | | ||||||||| | | Sbjct 3355266 AAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGG 3355207 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || ||| || || |||||| ||| | | | | ||||| || | |||| Sbjct 3355206 GGATGCCCTCTTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCA 3355147 Query 46545 CATCCACCGTGATGGTTTTGCCC----------GTCAGCGTTTTAACAAAGATTTGCATT 46594 | |||| |||||||| ||||| |||| || || || ||||| |||||| Sbjct 3355146 CCTCCAGGGTGATGGTCTTGCCNNNNNNNNNNAGTCAAGGTCTTCACGAAGATCTGCATT 3355087 Query 46595 TTG 46597 ||| Sbjct 3355086 TTG 3355084 >seq7857 Length=43258702 Score = 96.9 bits (106), Expect = 4e-15 Identities = 161/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| ||||| | ||| ||||| |||| || ||| || ||||| || || || | Sbjct 31543671 TGCCACCTCTCAGGTGCAGAACCAGGTGCAGGGTCGACTCTTTCTGGATGTTATAATCAG 31543730 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | |||||||| | || || ||||||||||| || || || | | ||||||||| | | Sbjct 31543731 AAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAAATGAGCCTCTGCTGGTCAGGGG 31543790 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || ||| || || |||||| ||| | | | | |||| || | |||| Sbjct 31543791 GGATGCCCTCTTTATCTTGGATCTTGGCCTTCACATTTTCGATGATGTCACTGGGCTCCA 31543850 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 | |||| | |||||| ||||| || || || || || ||||| ||||||||| Sbjct 31543851 CCTCCAGGGGGATGGTCTTGCCGGTTAGGGTCTTCACGAAGATCTGCATTTTG 31543903 Score = 89.7 bits (98), Expect = 6e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || ||||||||||| || || |||||||| | || || | |||||||| ||| || Sbjct 31543480 CTCTTTCTGGATATTGTAATCAGAAAGAGTGCGGCCATCTTCCATCTGCTTGCTGGCAAA 31543539 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | | ||||||||| | || | || ||| || | ||| ||| ||| | | Sbjct 31543540 GATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATATTGGATATTCGCCTTCACATT 31543599 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| || | ||||| |||| |||||||| ||||| || || || || || Sbjct 31543600 TTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTTAGGGTCTTCAC 31543659 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 31543660 GAAGATCTGCAT 31543671 >seq7782 Length=35566003 Score = 95.1 bits (104), Expect = 1e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 46409 TGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAG 46468 ||||||| ||||| || ||||| || | | || ||||| ||||| || || |||| Sbjct 14262525 TGGATATGATAGTCTGACAGAGTACGGCCAGCTTCCAGCTGTTTGCCCGCAAAAATCAGA 14262584 Query 46469 CGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACC 46528 ||||||||||| | ||| | | ||||||||| ||| || |||| || | | Sbjct 14262585 CGCTGCTGGTCAGGCGGGATGTCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCAATG 14262644 Query 46529 GTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATT 46588 ||||| || | || || || | |||||| | ||||||||||| || || |||||||| Sbjct 14262645 GTGTCACTGGGCTCAACCTCGAGGGTGATGTTCTTGCCCGTCAGGGTCTTCACAAAGATC 14262704 Query 46589 TGCAT 46593 ||||| Sbjct 14262705 TGCAT 14262709 >seq7764 Length=47977530 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/233 (69%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| |||| | || | ||||| |||| | | |||||| |||||||||||||| | Sbjct 34347125 TGCCACCTCGCAGGCGAAGCACCAAGTGCAGGGCAGACTCCTTCTGGATATTGTAGTCTG 34347184 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | | ||||| |||| || |||| || || || || ||| ||||||| || | | || Sbjct 34347185 AGACAGTGCCGCCGTCCTCCTGCTGATTCCCCGCAAAAATCCCGCGCTGCCGGGCCGGCG 34347244 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC-----GCTCGA 46539 | | || ||||||||| ||| || | |||| | || | ||||| |||| | Sbjct 34347245 GAATGCCCTCCTTGTCTTGGATTTTGTCTTTGACCTTCTCAGTGGTGTCACTGGGCTCCA 34347304 Query 46540 TTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCA 46592 ||||| || | |||| ||| ||||| | || || | |||||||| |||| Sbjct 34347305 -TCCACCTCGAGGGTGACGGTCTTGCCGGCTAGGGTCTCCACAAAGATCTGCA 34347356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565182780541440