Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq7846 143 3e-29
seq9 113 5e-20
seq7823 100 3e-16
seq7857 96.9 4e-15
seq7782 95.1 1e-14
seq7764 87.8 2e-12
>seq7846
Length=12828309
Score = 143 bits (158), Expect = 3e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
||||| || || |||| |||| |||| || |||||| ||||| |||||||| ||
Sbjct 9163009 CCTCCCCTCAAGCGCAGGACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCTGAC 9163068
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| |||||| |||| || ||||| || ||||| || ||||| | ||||||||||| ||
Sbjct 9163069 AGGGTGCGCCCGTCCTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCGGGGGGG 9163128
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| || ||| |||||| ||||||| ||||| || | | ||||| || | |||||
Sbjct 9163129 ATGCCCTCTTTGTCCTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACC 9163188
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||| |||||||| || || |||| || || || ||||| |||||
Sbjct 9163189 TCCAGGGTGATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCAT 9163235
>seq9
Length=2205763
Score = 113 bits (124), Expect = 5e-20
Identities = 164/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424
|||| || | || || | ||||| |||| || ||| || |||||||| ||||| |
Sbjct 1749323 TGCCACCCCGTAGGCGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTG 1749382
Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484
| ||||| || | || || ||||| ||||| || || | || ||||||||||| | ||
Sbjct 1749383 ACAGAGTACGGCCATCTTCCAGCTGTTTGCCCGCAAAAACCAGACGCTGCTGGTCAGGCG 1749442
Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTC-- 46542
| | || ||||||||| ||| || |||| || | | ||||| || | ||
Sbjct 1749443 GGATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCGA 1749502
Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| || | |||||||| ||||||||||| || || |||||||| |||||
Sbjct 1749503 CACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 1749553
>seq7823
Length=12955506
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425
||| || || | ||| | ||||| || | || ||| || ||||| ||||| || ||
Sbjct 3355553 GCCACCCCTCAGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGA 3355494
Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485
|||||||| | || || ||||||||||| || || || | | ||||||||| | ||
Sbjct 3355493 AAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAAATGAGCCTCTGCTGGTCAGGGGG 3355434
Query 46486 CACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 46545
| || ||| || || |||||| ||| | | | | ||||| || | |||||
Sbjct 3355433 GATGCCCTCTTTATCTTGGATCTTGGCCTTCACGTTTTCGATGGTGTCACTGGGCTCCAC 3355374
Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||| |||||||| ||||| ||||| || || || ||||| |||||
Sbjct 3355373 CTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 3355326
Score = 87.8 bits (96), Expect = 2e-12
Identities = 164/243 (67%), Gaps = 10/243 (4%)
Strand=Plus/Minus
Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424
|||| || || | |||| ||||| |||| || ||| || ||||| ||||| || |
Sbjct 3355326 TGCCACCCCTCAGGCGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAG 3355267
Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484
| |||||||| | || || ||||||||||| || || || | | ||||||||| | |
Sbjct 3355266 AAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGG 3355207
Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544
| | || ||| || || |||||| ||| | | | | ||||| || | ||||
Sbjct 3355206 GGATGCCCTCTTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCA 3355147
Query 46545 CATCCACCGTGATGGTTTTGCCC----------GTCAGCGTTTTAACAAAGATTTGCATT 46594
| |||| |||||||| ||||| |||| || || || ||||| ||||||
Sbjct 3355146 CCTCCAGGGTGATGGTCTTGCCNNNNNNNNNNAGTCAAGGTCTTCACGAAGATCTGCATT 3355087
Query 46595 TTG 46597
|||
Sbjct 3355086 TTG 3355084
>seq7857
Length=43258702
Score = 96.9 bits (106), Expect = 4e-15
Identities = 161/233 (69%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424
|||| ||||| | ||| ||||| |||| || ||| || ||||| || || || |
Sbjct 31543671 TGCCACCTCTCAGGTGCAGAACCAGGTGCAGGGTCGACTCTTTCTGGATGTTATAATCAG 31543730
Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484
| |||||||| | || || ||||||||||| || || || | | ||||||||| | |
Sbjct 31543731 AAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAAATGAGCCTCTGCTGGTCAGGGG 31543790
Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544
| | || ||| || || |||||| ||| | | | | |||| || | ||||
Sbjct 31543791 GGATGCCCTCTTTATCTTGGATCTTGGCCTTCACATTTTCGATGATGTCACTGGGCTCCA 31543850
Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597
| |||| | |||||| ||||| || || || || || ||||| |||||||||
Sbjct 31543851 CCTCCAGGGGGATGGTCTTGCCGGTTAGGGTCTTCACGAAGATCTGCATTTTG 31543903
Score = 89.7 bits (98), Expect = 6e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
||| || ||||||||||| || || |||||||| | || || | |||||||| ||| ||
Sbjct 31543480 CTCTTTCTGGATATTGTAATCAGAAAGAGTGCGGCCATCTTCCATCTGCTTGCTGGCAAA 31543539
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | | ||||||||| | || | || ||| || | ||| ||| ||| | |
Sbjct 31543540 GATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATATTGGATATTCGCCTTCACATT 31543599
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | ||||| || | ||||| |||| |||||||| ||||| || || || || ||
Sbjct 31543600 TTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTTAGGGTCTTCAC 31543659
Query 46582 AAAGATTTGCAT 46593
||||| |||||
Sbjct 31543660 GAAGATCTGCAT 31543671
>seq7782
Length=35566003
Score = 95.1 bits (104), Expect = 1e-14
Identities = 132/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 46409 TGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAG 46468
||||||| ||||| || ||||| || | | || ||||| ||||| || || ||||
Sbjct 14262525 TGGATATGATAGTCTGACAGAGTACGGCCAGCTTCCAGCTGTTTGCCCGCAAAAATCAGA 14262584
Query 46469 CGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACC 46528
||||||||||| | ||| | | ||||||||| ||| || |||| || | |
Sbjct 14262585 CGCTGCTGGTCAGGCGGGATGTCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCAATG 14262644
Query 46529 GTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATT 46588
||||| || | || || || | |||||| | ||||||||||| || || ||||||||
Sbjct 14262645 GTGTCACTGGGCTCAACCTCGAGGGTGATGTTCTTGCCCGTCAGGGTCTTCACAAAGATC 14262704
Query 46589 TGCAT 46593
|||||
Sbjct 14262705 TGCAT 14262709
>seq7764
Length=47977530
Score = 87.8 bits (96), Expect = 2e-12
Identities = 160/233 (69%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424
|||| |||| | || | ||||| |||| | | |||||| |||||||||||||| |
Sbjct 34347125 TGCCACCTCGCAGGCGAAGCACCAAGTGCAGGGCAGACTCCTTCTGGATATTGTAGTCTG 34347184
Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484
| | ||||| |||| || |||| || || || || ||| ||||||| || | | ||
Sbjct 34347185 AGACAGTGCCGCCGTCCTCCTGCTGATTCCCCGCAAAAATCCCGCGCTGCCGGGCCGGCG 34347244
Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC-----GCTCGA 46539
| | || ||||||||| ||| || | |||| | || | ||||| |||| |
Sbjct 34347245 GAATGCCCTCCTTGTCTTGGATTTTGTCTTTGACCTTCTCAGTGGTGTCACTGGGCTCCA 34347304
Query 46540 TTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCA 46592
||||| || | |||| ||| ||||| | || || | |||||||| ||||
Sbjct 34347305 -TCCACCTCGAGGGTGACGGTCTTGCCGGCTAGGGTCTCCACAAAGATCTGCA 34347356
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565182780541440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |