Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq7846 143 3e-29 seq7823 127 2e-24 seq9 118 1e-21 seq7869 100 3e-16 seq7825 98.7 1e-15 seq7782 98.7 1e-15 seq7858 87.8 2e-12 seq7842 84.2 2e-11 seq7767 82.4 8e-11 >seq7846 Length=12828309 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || || || ||||||||| | || || ||| ||| Sbjct 9163235 ATGCAGATCTTCGTGAAGACCTTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 9163176 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||||||||| || ||| ||||||| Sbjct 9163175 GACACCATCGAGAACG-TCAAGGCGAAGATCCAGGACAAAGAGGGCATCCCCCCCGACCA 9163117 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || | || | || || ||||||||||| |||| ||||||||| |||||||| Sbjct 9163116 GCAGAGGTTGATCTTTGCCGGGAAACAGCTGGAGGACGGGCGCACCCTGTCAGACTACAA 9163057 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| | || ||||| ||||| ||||| ||||| || || Sbjct 9163056 CATCCAGAAGGAGTCCACTCTGCACTTGGTCCTGCGCTTGAGGGGAGG 9163009 >seq7823 Length=12955506 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| ||||||||| | || || ||| ||| Sbjct 3355326 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 3355385 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | ||||| | || | || |||| || |||||||| || ||| | ||||| Sbjct 3355386 GACACCATCGAAAACG-TGAAGGCCAAGATCCAAGATAAAGAGGGCATCCCCCCTGACCA 3355444 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| ||||||||| || ||||| |||||||| || | ||||| || || ||||| Sbjct 3355445 GCAGAGGCTCATTTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAA 3355504 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| || || | || || || |||| || ||| |||| || ||| Sbjct 3355505 CATCCAGAAAGAGTCAACTCTCCACCTGGTTCTCCGTCTGAGGGGTGGC 3355553 Score = 111 bits (122), Expect = 2e-19 Identities = 145/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 38271 GGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAAAAA 38330 ||||| ||||||||| | || || ||| ||| |||| | | ||| | || | || Sbjct 3355125 GGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGACACCATCGAAAATGTGAAGGCCAAG 3355184 Query 38331 ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAG 38390 |||| || |||||||| || ||| | ||||| ||| ||||||| | || ||||| ||| Sbjct 3355185 ATCCAAGATAAAGAGGGCATCCCCCCTGACCAGCAGAGGCTCATCTTTGCAGGCAAGCAG 3355244 Query 38391 CTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTG 38450 ||||| || | ||||| || || ||||||||||| || || |||| ||||| || Sbjct 3355245 CTGGAAGATGGCCGCACTCTTTCTGATTACAACATCCAGAAAGAGTCGACCCTGCACCTG 3355304 Query 38451 GTGCTGCGTTTGAGAGGCGGC 38471 || ||||| |||| || ||| Sbjct 3355305 GTCCTGCGCCTGAGGGGTGGC 3355325 >seq9 Length=2205763 Score = 118 bits (130), Expect = 1e-21 Identities = 159/218 (73%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGT--CGAGGCCA 38301 ||||| || || || || || || |||||||| ||||||||| | || || |||| ||| Sbjct 1749553 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTGTCGAGCCCA 1749494 Query 38302 CCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GAC 38360 |||| | | | | | |||| ||||||| ||||| ||||| || |||||| ||| Sbjct 1749493 GTGACACCATTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCAT-CCCGCCTGAC 1749435 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||| || ||| ||||||||||||||||| || | || || || ||||| Sbjct 1749434 CAGCAGCGTCTGGTTTTTGCGGGCAAACAGCTGGAAGATGGCCGTACTCTGTCAGACTAT 1749375 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 || ||||| || || | || ||||| |||||||| || Sbjct 1749374 AATATCCAGAAAGAGTCCACCCTGCACTTGGTGCTTCG 1749337 >seq7869 Length=26620976 Score = 100 bits (110), Expect = 3e-16 Identities = 164/234 (70%), Gaps = 7/234 (3%) Strand=Plus/Plus Query 38239 AAAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGG 38298 |||| ||||| || || || || || || ||| || ||||||||| || | | |||| Sbjct 25199974 AAAAGATGCAGATCTTTGTGAAGACCCTAGTGGGAAAGACCATCACCCTCAAGGCCGAGC 25200033 Query 38299 CCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC- 38357 ||| |||| | | ||| | ||| ||||| ||||| |||| || || ||| Sbjct 25200034 CCAGTGACACCATTGAAAATGTCAAA-----AATCCAAGACAAGGAGGACAT-CCTGCCT 25200087 Query 38358 GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 38417 ||||| |||| |||| || |||||||||||||||||| | | ||||| ||| ||| Sbjct 25200088 GACCAGCAGCATCTCAGTTTTGCGGGCAAACAGCTGGACAATGGACGCACTCTCTCAGAC 25200147 Query 38418 TACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| | || || || | || ||| | |||||||| || || |||| ||| Sbjct 25200148 CACAACGTACAGAAAGAGTCCACCCTGAACTTGGTGCTTCGCCTGCGAGGTGGC 25200201 >seq7825 Length=26217151 Score = 98.7 bits (108), Expect = 1e-15 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 |||| | || | || || || || || | |||||| |||| |||| | || || ||| | Sbjct 9509588 AAAATTACAGACCTTTGTGAAGACCCTGAGGGGCAAGACCAGCACCCTTGAGGTTGAGCC 9509647 Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 || |||| | | || | |||| ||||||| ||||||||||| || || |||| Sbjct 9509648 CAATGACACCACCAAGACCATCAAAGCCAAAATCCAAGACAAAGAGGGCATCCCTCCCGA 9509707 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| |||| || || | ||||||||||||||||| || | ||| | ||| ||| | Sbjct 9509708 CCAGCAGCATCTGATCTTTGCGGGCAAACAGCTGGAGGATGGCCGCGCTCTCTCAGACCA 9509767 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 || | ||| || || | || ||||| ||||||| || Sbjct 9509768 CAGTAGCCAGAAAGAGTCCACCCTGCACCTGGTGCTTCG 9509806 >seq7782 Length=35566003 Score = 98.7 bits (108), Expect = 1e-15 Identities = 115/153 (75%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || |||||||| | ||||||| |||| || ||| ||| Sbjct 14262709 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGAACATCACCCTCGAGGTTGAGCCCAGT 14262650 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCA 38362 |||| | | | | | |||| ||||||| ||||| |||| || |||||| ||||| Sbjct 14262649 GACACCATTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGACAT-CCCGCCTGACCA 14262591 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGA 38395 ||||| || |||| ||||||||||||||||| Sbjct 14262590 GCAGCGTCTGATTTTTGCGGGCAAACAGCTGGA 14262558 >seq7858 Length=29646629 Score = 87.8 bits (96), Expect = 2e-12 Identities = 142/203 (70%), Gaps = 1/203 (0%) Strand=Plus/Minus Query 38242 AAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCA 38301 ||||||| || ||| | || || || || |||| ||||||||| | || || ||| ||| Sbjct 23743404 AAATGCAGATCTTCATGAAGACCCTGACCAGCAAGACCATCACCCTGGAGGTGGAGCCCA 23743345 Query 38302 CCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAG-AGGGAATTCCCGCCGAC 38360 |||| | | ||| | || | || |||| || |||| |||| || ||| | ||| Sbjct 23743344 GTGACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAAGGAGGGCATCCCCCCTGAC 23743285 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || || ||||||| | || |||| |||||||| || | ||||| || || ||| Sbjct 23743284 CAGGAGAGGCTCATCTTTGCCAGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTAC 23743225 Query 38421 AACATCCAAAAGGAAGCGACGCT 38443 |||||||| || || |||| || Sbjct 23743224 AACATCCAGAAAGAGTCGACTCT 23743202 >seq7842 Length=42459490 Score = 84.2 bits (92), Expect = 2e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976 |||| || ||| ||| ||||| ||| || || | ||| ||||| ||||||||||| | Sbjct 7548465 CCTCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCAGGCATCAGGCCGCGTTTCT 7548406 Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAG 133036 ||||||| ||||| | || ||| || |||||||||| || || || || || |||| Sbjct 7548405 TGAGCCAGAATATTGACGCAAAAGAACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAAG 7548346 Query 133037 CCAC 133040 |||| Sbjct 7548345 CCAC 7548342 >seq7767 Length=50048226 Score = 82.4 bits (90), Expect = 8e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| ||||| || ||||| || ||||||||| |||| || || || Sbjct 33066959 AAGATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGATCCC 33066900 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | || | | ||| | || | || || | || || || |||||||| | || Sbjct 33066899 TCGGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGAT 33066840 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||| | || || | || ||||| || ||||| || | ||||| | |||||| Sbjct 33066839 CAGCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTAC 33066780 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTG 38453 ||||| |||||||| | || || ||| | ||| Sbjct 33066779 AACATTCAAAAGGAGTCTACTCTTCATCTTGTG 33066747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500123582996480