Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq7837 172 2e-37 seq7828 123 1e-22 seq7857 114 5e-20 seq7767 114 5e-20 seq7806 96.9 1e-14 seq7858 95.1 5e-14 seq7801 95.1 5e-14 seq7764 93.3 2e-13 seq7784 91.5 6e-13 seq7855 87.8 7e-12 >seq7837 Length=29518589 Score = 172 bits (190), Expect = 2e-37 Identities = 350/517 (68%), Gaps = 7/517 (1%) Strand=Plus/Plus Query 451091 AACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAA 451150 ||||| || | |||||| |||||| | |||||| | | || | ||||| | || ||| Sbjct 1216490 AACACTGTCTTTGATGCCAAACGTCTGATTGGCAGGAAGTTTAATGATCCTGTAGTGCAA 1216549 Query 451151 AAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTA--TATTC 451208 ||| | ||| | | ||| | | ||| | ||| || ||| |||||| | |||| Sbjct 1216550 TCAGATATGAAACTTTGGCCTTTTCAAGTAATCAATGAAGGAGGCAAGCCCAAGGTATTG 1216609 Query 451209 AAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTC 451268 || | || ||||| || | ||| |||| |||||| ||||| || |||||||| | Sbjct 1216610 GTGTCA--TACAAAGGGGAGAAAAAAGCTTTCTATCCTGAGGAAATCTCTTCTATGGTAC 1216667 Query 451269 TTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAA 451328 | || || ||||| || || || || | | | || || ||||| |||| || | Sbjct 1216668 TGACGAAGATGAAGGAGACTGCTGAGGCTTTTTTGGGCCACCCCGTTACCAATGCTGTGA 1216727 Query 451329 TTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATA 451388 | ||||| || || |||||||||||| | ||||| || || || || |||||||| | Sbjct 1216728 TCACTGTACCAGCCTATTTCAATGATTCTCAACGCCAGGCCACCAAGGATGCAGGCGTGA 1216787 Query 451389 TTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATG 451448 |||| ||| | ||||| || ||||||| |||||||| ||||| ||||| | || |||| Sbjct 1216788 TTGCAGGTCTCAATGTGCTAAGAATTATCAATGAACCCACAGCTGCTGCCATTGCGTATG 1216847 Query 451449 GACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAG 451508 | ||| ||| | || | ||| | || | || | |||||| | ||||||| Sbjct 1216848 GCTTAGATAAAGC---AGGTCAGGGAGAGCGACATGTCTTGATCTTTGATCTAGGTGGAG 1216904 Query 451509 GAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCA 451568 | || |||| || | || | || || ||||| | ||||| || ||||| || Sbjct 1216905 GCACATTTGATGTGTCCATCCTGACCATAGATGATGGAATTTTTGAGGTGAAGGCCACAG 1216964 Query 451569 ATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 ||| ||||| || || ||||| || || |||| || Sbjct 1216965 CTGGGGATACCCACCTGGGAGGGGAGGACTTTGACAA 1217001 >seq7828 Length=21597463 Score = 123 bits (136), Expect = 1e-22 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| ||||| || || || || || || ||||| || |||||| | || Sbjct 14213586 ATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACTCTCGAGGTTGAACCCTCG 14213527 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || ||| ||| || || ||||| ||||||||||||||||||||||||| Sbjct 14213526 GATACAATAGAAAATATAAAGGCCAAGATTCAGAATAAGGAAGGAATTCCTCCTGATCAG 14213467 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | || || | || || ||||| ||||||||| | ||||| | || || || Sbjct 14213466 CAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTCCTTTGTCTGACTACAAC 14213407 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||| | ||||| | || ||||| | || || ||||| Sbjct 14213406 ATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACT 14213369 >seq7857 Length=43258702 Score = 114 bits (126), Expect = 5e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| ||||| || | || || || || ||||| || | |||| | || Sbjct 24177955 ATGCAGATTTTCGTGAAAACTCTTATGGGGAAGACCATCACTCTCGAGGCTGAACCCTCG 24178014 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || || | | || || ||||| |||||||||||||||||||||||||| Sbjct 24178015 GATACAATACAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAG 24178074 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || || || | || || ||||| ||||||||| | ||| || | || || || Sbjct 24178075 CAGAGATTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTCTGTCTGACTACAAC 24178134 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 | | | ||||| | || ||||| | || |||||||| Sbjct 24178135 ACTCAAAAGGAGTCCACTCTTCATCTTGTGTTAAGACT 24178172 Score = 87.8 bits (96), Expect = 7e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 451367 GCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCT 451426 || ||||| ||||| || || || |||| ||||||| ||||| | ||||||||||| Sbjct 22739069 GCCACTAAGGATGCTGGCCAGATATCTGGACTAAATGTGCTTCGGGTAATTAATGAACCC 22739010 Query 451427 ACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGA 451467 ||||| |||||||| || ||||| |||| |||||| |||| Sbjct 22739009 ACAGCTGCTGCTCTGGCCTATGGTCTAGACAAATCAGAAGA 22738969 >seq7767 Length=50048226 Score = 114 bits (126), Expect = 5e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| ||||| || || || || || || || || || ||||| | || Sbjct 33066956 ATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGATCCCTCG 33066897 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || ||| | | || || ||||| |||||||||||||||||||||||||| Sbjct 33066896 GATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAG 33066837 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | || || | || || ||||| ||||||||| | |||||| | || || || Sbjct 33066836 CAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTACAAC 33066777 Query 391230 ATTGATAAGGATGCAACACTTCA 391252 ||| | ||||| | || ||||| Sbjct 33066776 ATTCAAAAGGAGTCTACTCTTCA 33066754 Score = 91.5 bits (100), Expect = 6e-13 Identities = 151/216 (70%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 96049 TGCAATTTGTGGCACTAGGGGATCGTCAGGATTTGGGTCAGCCAATAAACTGCATAA--G 96106 |||||| | |||||||||||| || || || ||||| ||| || | || | || | Sbjct 4464387 TGCAATCTCTGGCACTAGGGGGTCATCTGGGTTTGGATCA--CATAGCAGTGAACAAATG 4464330 Query 96107 GATAAAAGTACTTTACTAATGTTTAATGCTGGGCTCCAGTTATTTTTTAAAATATCTAAA 96166 |||||||| |||||| ||| |||| || || ||| | | ||| |||||| | | Sbjct 4464329 GATAAAAGAACTTTAGAAATAGTTAAAGCAGGAGACCACTGTGATCTTAGAATATCGAGA 4464270 Query 96167 CAAATTGCACCTGTAGTACTAATATTTGGATGATAAATAGGAGTTTTAAATATAATTTTA 96226 ||||| || || | ||||||||||||||||||| ||| ||||| || ||| Sbjct 4464269 CAAATGCTGCCATTACTGTTAATATTTGGATGATAAATTCTTGTTGTAAATGCAACCTTA 4464210 Query 96227 GGAGGCTTATATGGATAGTCTTCAGGAAAAGTAATT 96262 || || || | || |||||| ||||||| |||| Sbjct 4464209 GGTGGTTTGAAGGGGTAGTCTGTAGGAAAATGAATT 4464174 >seq7806 Length=37070314 Score = 96.9 bits (106), Expect = 1e-14 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 ||||| ||||||| ||||||| || || |||||||||||||| ||||| || ||||| Sbjct 8044408 GTTACCCATGCAGTTGTTACTGTACCAGCCTATTTCAATGATGCCCAACGCCAGGCAACC 8044467 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACC 451425 |||||||| ||| ||||||||| || ||||| | | || || ||||| || Sbjct 8044468 AAAGATGCTGGAACTATTGCTGGATTGAATGTCATGAGGATCATCAATGAGCC 8044520 >seq7858 Length=29646629 Score = 95.1 bits (104), Expect = 5e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 391056 ATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAAC 391115 |||||| | ||||| || || || || || || || || || |||| | || |||| Sbjct 12424955 ATTTTCCTGAAAACCCTCACGGGGAAGACCATCACCCTCGAGCCTGAACCCTCGGATACA 12424896 Query 391116 ATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGT 391175 || ||| | | | || ||||| |||||||||||||||||||||||||| || | Sbjct 12424895 ATAGAAAATGTACAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAGCAGAGA 12424836 Query 391176 TTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGAT 391235 | || | | || || ||||| ||| ||||| | |||||| | || || || ||| | Sbjct 12424835 CTGATCGTTGCTGGCAAGCAACTGGAAAATGGATGCACTTTGTCTGACTACAACATTCAA 12424776 Query 391236 AAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||||| | || ||||| | || || ||||| Sbjct 12424775 AAGGAGTCTACTCTTCATCTTGTGTTGAGACT 12424744 >seq7801 Length=29706330 Score = 95.1 bits (104), Expect = 5e-14 Identities = 169/245 (69%), Gaps = 4/245 (2%) Strand=Plus/Plus Query 96049 TGCAATTTGTGGCACTAGGGGATCGTCAGGATTTGGGTCAGCCAATAAACTGCATAA--G 96106 |||||| | |||||||||||| || || || ||||| ||| || | || | || | Sbjct 375336 TGCAATCTCTGGCACTAGGGGGTCATCTGGGTTTGGATCA--CATAGCAGTGAACAAACG 375393 Query 96107 GATAAAAGTACTTTACTAATGTTTAATGCTGGGCTCCAGTTATTTTTTAAAATATCTAAA 96166 |||||||| |||||| ||| ||| || || ||| | | ||| |||||| | | Sbjct 375394 GATAAAAGAACTTTAGAAATAGTTAGAGCAGGAGACCACTGTGATCTTAGAATATCGAGA 375453 Query 96167 CAAATTGCACCTGTAGTACTAATATTTGGATGATAAATAGGAGTTTTAAATATAATTTTA 96226 ||||| || || | ||||||||||||||||||| ||| ||||| || ||| Sbjct 375454 CAAATGCTGCCATTACTGTTAATATTTGGATGATAAATTCTTGTTGTAAATGCAACCTTA 375513 Query 96227 GGAGGCTTATATGGATAGTCTTCAGGAAAAGTAATTTCTAATTGGAATACTCCACCCTCA 96286 || || || | || |||||| ||||||| |||| || |||||| ||||| | | Sbjct 375514 GGTGGTTTGAAGGGGTAGTCTGTAGGAAAATGAATTGTCAAAAAGAATACACCACCTTGA 375573 Query 96287 TAGGG 96291 || || Sbjct 375574 TATGG 375578 >seq7764 Length=47977530 Score = 93.3 bits (102), Expect = 2e-13 Identities = 152/218 (70%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || ||||| || | || || || || ||||| || |||||||| || Sbjct 26988423 ATGCAGATTTTTGTGAAAACCCTTATGGGGAAGACCATCACTCTCGAGGTTGAATCCTCA 26988364 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 | || | ||| | | || || || || |||||||||||||||||||||||||| Sbjct 26988363 GGTACAGTAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 26988304 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | || ||| | || || ||||| ||||| || ||||||| || || | Sbjct 26988303 CA--GACTGATCTTCACTGGCAAGCAACTGGAAGACAGACAAACTTTGTGTGACTACAGC 26988246 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||| | ||||| | || ||||| | || || ||||| Sbjct 26988245 ATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACT 26988208 Score = 86.0 bits (94), Expect = 2e-11 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| ||||| || | || || || || |||||||| |||||| | || Sbjct 36155546 ATGCAGATTTTCGTGAAAACCCTTATGGGGAAGACCATCACTCTTGAGGTTGAACCCTCG 36155487 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGAT 391166 |||| || ||| | | || || ||||| |||||||||||||||||||||||| Sbjct 36155486 GATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGAT 36155430 >seq7784 Length=5160177 Score = 91.5 bits (100), Expect = 6e-13 Identities = 151/216 (70%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 96049 TGCAATTTGTGGCACTAGGGGATCGTCAGGATTTGGGTCAGCCAATAAACTGCATAA--G 96106 |||||| | |||||||||||| || || || ||||| ||| || | || | || | Sbjct 2828104 TGCAATCTCTGGCACTAGGGGGTCATCTGGGTTTGGATCA--CATAGCAGTGAACAAATG 2828047 Query 96107 GATAAAAGTACTTTACTAATGTTTAATGCTGGGCTCCAGTTATTTTTTAAAATATCTAAA 96166 |||||||| |||||| ||| |||| || || ||| | | ||| |||||| | | Sbjct 2828046 GATAAAAGAACTTTAGAAATAGTTAAAGCAGGAGACCACTGTGATCTTAGAATATCGAGA 2827987 Query 96167 CAAATTGCACCTGTAGTACTAATATTTGGATGATAAATAGGAGTTTTAAATATAATTTTA 96226 ||||| || || | ||||||||||||||||||| ||| ||||| || ||| Sbjct 2827986 CAAATGCTGCCATTACTGTTAATATTTGGATGATAAATTCTTGTTGTAAATGCAACCTTA 2827927 Query 96227 GGAGGCTTATATGGATAGTCTTCAGGAAAAGTAATT 96262 || || || | || |||||| ||||||| |||| Sbjct 2827926 GGTGGTTTGAAGGGGTAGTCTGTAGGAAAATGAATT 2827891 >seq7855 Length=25611994 Score = 87.8 bits (96), Expect = 7e-12 Identities = 153/217 (71%), Gaps = 7/217 (3%) Strand=Plus/Plus Query 96049 TGCAATTTGTGGCACTAGGGGATCGTCAGGATTTGGGTCAGCCAATAAACTGCATAA--G 96106 |||||| | |||||||||||| || || || ||||| ||| || | || | || | Sbjct 11042901 TGCAATGTCTGGCACTAGGGGGTCATCTGGGTTTGGATCA--CATAGCAGTGAACAAATG 11042958 Query 96107 GATAAAAGTACTTTACTAAT-GTTTAATGCTGGGCTCCAGTTATTTTTTAAAATATCTAA 96165 |||||||| |||||| ||| |||||| || || ||| | | |||||||||| | Sbjct 11042959 GATAAAAGAACTTTAGAAATAGTTTAA-GCAGGAGACCACTGTAATCTTAAAATATCAAG 11043017 Query 96166 ACAAATTGCACCTGTAGTACTAATATTTGGATGATAAATAGGAGTTTTAAATATAATTTT 96225 |||||| || || | ||||||||||||||||||| ||||| ||| || || Sbjct 11043018 ACAAATGCTGCCATTACTGTTAATATTTGGATGATAAATTCTTGTTTT-AATGCAACCTT 11043076 Query 96226 AGGAGGCTTATATGGATAGTCTTCAGGAAAAGTAATT 96262 ||| | || | || |||||| ||||||| |||| Sbjct 11043077 AGGTAGTTTGAAAGGGTAGTCTGTAGGAAAATGAATT 11043113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975519129042176