Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq7857 129 1e-24 seq7828 127 5e-24 seq7846 118 2e-21 seq9 116 8e-21 seq7818 113 1e-19 seq7764 93.3 9e-14 seq7825 89.7 1e-12 seq7865 87.8 4e-12 seq7782 86.0 1e-11 >seq7857 Length=43258702 Score = 129 bits (142), Expect = 1e-24 Identities = 157/213 (74%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| ||||| ||||| |||||||| || ||||||||||| | |||||| | |||||||| Sbjct 31543462 AACCAGGTGGAGAGTTGACTCTTTCTGGATATTGTAATCAGAAAGAGTGCGGCCATCTTC 31543521 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 | |||||| | || |||||||| | || ||||| || || ||||| ||||| | ||| Sbjct 31543522 CATCTGCTTGCTGGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATATTG 31543581 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGT 195107 || || ||| || || ||||||||||| ||| ||||| || ||||| | || Sbjct 31543582 GATATTCGCCTTCACATTTTCAATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATGGT 31543638 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| || || | || || ||||| | ||||| Sbjct 31543639 CTTGCCGGTTAGGGTCTTCACGAAGATCTGCAT 31543671 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 ||||| || ||||| |||||||||||||| |||||| | ||||| || | ||||| | Sbjct 24178172 AGTCTTAACACAAGATGAAGAGTGGACTCCTTTTGAGTGTTGTAGTCAGACAGAGTGCGT 24178113 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| || ||||| || || ||||| | || || || || |||||||| ||||| Sbjct 24178112 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCAGGAGGAATTCCTTCC 24178053 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 || || ||||| || ||| || || | || || ||||| ||| | || || || Sbjct 24178052 TTATCCTGAATCTTGGCCTTTACATTTTGTATTGTATCCGAGGGTTCAGCCTCGAGAGTG 24177993 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || | | |||||| ||||| | ||||| Sbjct 24177992 ATGGTCTTCCCCATAAGAGTTTTCACGAAAATCTGCAT 24177955 >seq7828 Length=21597463 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 |||||||| ||||| |||||||||||||| |||||||| ||||| || | | || | Sbjct 14213369 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGGACGT 14213428 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| || ||||| || || ||||| |||| || || || |||||||| ||||| Sbjct 14213429 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCC 14213488 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 || | ||||| || ||| | || || || || ||||| ||| || || || || Sbjct 14213489 TTATTCTGAATCTTGGCCTTTATATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTG 14213548 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || || | ||||| ||||| | ||||| Sbjct 14213549 ATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 14213586 Score = 89.7 bits (98), Expect = 1e-12 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || ||||||||||| || ||||| || || | ||||| | |||||||| |||| Sbjct 10995412 GTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACAGCCATCTTCTAGCTA 10995353 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || || || || | || | || ||||| || || ||||| || | |||||| ||||| Sbjct 10995352 TTTGCCCGCAAAAGTCAGACACTGCTGGTCAGGCGGGATGCCCTCCTGGTCTTGGATTTT 10995293 Query 195057 TTGCTTGACGTTCTCAATGGTGTC 195080 ||||| |||||| ||||||| Sbjct 10995292 GGCTTTGACATTCTCAGTGGTGTC 10995269 >seq7846 Length=12828309 Score = 118 bits (130), Expect = 2e-21 Identities = 151/207 (73%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| ||||||||||| || || || ||||| || | || || | ||| || || ||||| Sbjct 9163032 GTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGCCCGTCCTCCAGCTG 9163091 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || || || ||||| | | || ||||| || || ||||| |||||||| || || || Sbjct 9163092 TTTCCCGGCAAAGATCAACCTCTGCTGGTCGGGGGGGATGCCCTCTTTGTCCTGGATCTT 9163151 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTCTTTCC 195113 |||||||||||| |||||||| ||| ||||| || ||||| | ||||| || Sbjct 9163152 CGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATGGTCTTACC 9163208 Query 195114 TGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| || || ||||| | ||||| Sbjct 9163209 GGTCAAGGTCTTCACGAAGATCTGCAT 9163235 >seq9 Length=2205763 Score = 116 bits (128), Expect = 8e-21 Identities = 150/206 (73%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || ||||||||||| || ||||| || || | ||||| | |||||||| ||||| Sbjct 1749348 GTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCATCTTCCAGCTG 1749407 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || || || || | || || || ||||| || || ||||| || |||||||| ||||| Sbjct 1749408 TTTGCCCGCAAAAACCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTGGATTTT 1749467 Query 195057 TTGCTTGACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCT 195114 ||||| ||||||||||||| | | || ||| |||||||| | ||||| || Sbjct 1749468 GGCTTTGACATTCTCAATGGTGTCACTGGGCTCGACACCTCAAGGGTGATGGTCTTGCCC 1749527 Query 195115 GTCAAAGTTTTTACGAACACTTGCAT 195140 |||| || || || || | ||||| Sbjct 1749528 GTCAGGGTCTTCACAAAGATCTGCAT 1749553 >seq7818 Length=84771923 Score = 113 bits (124), Expect = 1e-19 Identities = 164/228 (72%), Gaps = 4/228 (2%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTA-ATCGGCAAGAGTTCT 194981 |||||||| ||||| |||||||||||||| |||||||| ||||| || | ||| ||| | Sbjct 26785806 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGATGGACAA-AGTACG 26785748 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 ||||| | || ||||| || || ||||| |||| || || || |||||| |||| Sbjct 26785747 TTCATCTCCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCACAAGGAATTTCTTC 26785688 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 || || ||||| || ||| | || || | || |||| ||| || ||||| || Sbjct 26785687 CTTATCCTGAATCTTGACCTTTGCATTGTCTGTTGTAGCCGAGGGTTCAACCTCAAGAGT 26785628 Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT--ATGGT 195147 | ||||| || || | ||||| ||||| | ||||||| ||||| Sbjct 26785627 GATAGTCTTCCCGGTAAGGGTTTTCACGAAAATCTGCATTTTGATGGT 26785580 >seq7764 Length=47977530 Score = 93.3 bits (102), Expect = 9e-14 Identities = 152/218 (70%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 |||||||| ||||| |||||||||||||| |||||||| |||| || | |||| Sbjct 26988208 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGCTGTAGTCACACAAAGTTTGT 26988267 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 | ||||| || ||||| || | |||||| |||| || || || |||||||| ||||| Sbjct 26988268 CTGTCTTCCAGTTGCTTGCCAGTGAAGATCAGTC--TGCTGATCAGGAGGAATTCCTTCC 26988325 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 || || || || || ||| || || || | || | || ||| || || || || Sbjct 26988326 TTATCCTGGATCTTGGCCTTTACATTTTCTACTGTACCTGAGGATTCAACCTCGAGAGTG 26988385 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || | | ||||| || || | ||||| Sbjct 26988386 ATGGTCTTCCCCATAAGGGTTTTCACAAAAATCTGCAT 26988423 >seq7825 Length=26217151 Score = 89.7 bits (98), Expect = 1e-12 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || ||||||||||| || || ||| || | |||| | ||||| || Sbjct 9509800 ACCAGGTGCAGGGTGGACTCTTTCTGGCTACTGTGGTCTGAGAGAGCGCGGCCATCCTCC 9509741 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||| || || || ||||| || | || ||||| ||||| ||||| ||||||||||| Sbjct 9509740 AGCTGTTTGCCCGCAAAGATCAGATGCTGCTGGTCGGGAGGGATGCCCTCTTTGTCTTGG 9509681 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTC 195080 ||||| |||| | ||| ||||||| Sbjct 9509680 ATTTTGGCTTTGATGGTCTTGGTGGTGTC 9509652 >seq7865 Length=68117122 Score = 87.8 bits (96), Expect = 4e-12 Identities = 143/205 (70%), Gaps = 6/205 (3%) Strand=Plus/Plus Query 194941 AGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTA 195000 || || ||| |||| | || ||||| || | |||| | |||||||| |||||||| Sbjct 53671876 AGGGTTGACACTTTCCGGATGTTGTAGTCAGAAAGAATGTGGCCATCTTCCAGCTGCTTG 53671935 Query 195001 CCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGC 195060 ||||| ||||| || | || ||| | | || ||||||||||| || || | || | Sbjct 53671936 CCTGCAAAGATGAGCCTCTGCTGGCCACGGGGGATGCCTTCTTTATCCTGGGTCTTGGCC 53671995 Query 195061 TTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 || ||||||| ||||| || ||| |||||| || ||||| | ||||| | ||| Sbjct 53671996 TTCACGTTCTTCATGGTATC---ACTGGGTTCCACCTCCAGGGTGATGGTCTTACAGGTC 53672052 Query 195118 AAAGTTTTTACGAACACTTGCATTT 195142 | | || | ||| || ||||||| Sbjct 53672053 AGGATCTTCATGAAGACCTGCATTT 53672077 >seq7782 Length=35566003 Score = 86.0 bits (94), Expect = 1e-11 Identities = 142/203 (70%), Gaps = 8/203 (4%) Strand=Plus/Plus Query 194941 AGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTA 195000 || ||||||||| | | |||| || || | ||||| | ||| |||| ||||| || Sbjct 14262512 AGGGTGGACTCTCT--GGATATGATAGTCTGACAGAGTACGGCCAGCTTCCAGCTGTTTG 14262569 Query 195001 CCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGC 195060 || || || || || || || ||||| || || ||| | || |||||||| ||||| Sbjct 14262570 CCCGCAAAAATCAGACGCTGCTGGTCAGGCGGGATGTCCTCCTTGTCTTGGATTTTGGCT 14262629 Query 195061 TTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||||| |||||||||||||| ||| || || || ||||| | |||| || ||| Sbjct 14262630 TTGACATTCTCAATGGTGTC---ACTGGGCTCAACCTCGAGGGTGATGTTCTTGCCCGTC 14262686 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | || || || || | ||||| Sbjct 14262687 AGGGTCTTCACAAAGATCTGCAT 14262709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109369697685824