Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq9 123 2e-23 seq7846 122 6e-23 seq7782 111 1e-19 seq7823 98.7 6e-16 seq7857 93.3 3e-14 seq7828 93.3 3e-14 seq20 93.3 3e-14 seq7869 86.0 4e-12 >seq9 Length=2205763 Score = 123 bits (136), Expect = 2e-23 Identities = 157/213 (74%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| |||||||| || |||||||| || || | || |||| ||| Sbjct 1749343 ACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCATCTTCC 1749402 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| || ||||| | || || |||||||| |||| | ||||||||||| Sbjct 1749403 AGCTGTTTGCCCGCAAAAACCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTGG 1749462 Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACA--TCGACGGTTATGGT 34948 || || |||||| || || || | |||| || ||| ||| || | ||| ||||| Sbjct 1749463 ATTTTGGCTTTGAC--ATTCTCAATGGTGTCACTGGGCTCGACACCTCAAGGGTGATGGT 1749520 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||| || |||||||||||||||||||| Sbjct 1749521 CTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 1749553 >seq7846 Length=12828309 Score = 122 bits (134), Expect = 6e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||||||||| | || |||||||| | ||| || ||||| ||||| ||||| || Sbjct 9163009 CCTCCCCTCAAGCGCAGGACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCTGAC 9163068 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | || | || ||||||||||| |||||||| || | | |||||||| | || Sbjct 9163069 AGGGTGCGCCCGTCCTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCGGGGGGG 9163128 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||| ||||| |||||| |||||| | || | |||| || ||| || Sbjct 9163129 ATGCCCTCTTTGTCCTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACC 9163188 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || | ||| ||||| || || || | |||||||| ||||||||||| Sbjct 9163189 TCCAGGGTGATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCAT 9163235 >seq7782 Length=35566003 Score = 111 bits (122), Expect = 1e-19 Identities = 141/192 (73%), Gaps = 4/192 (2%) Strand=Plus/Plus Query 34792 CTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATA 34851 || |||| || | |||||| || || | || || | ||||||||||| || ||||| | Sbjct 14262520 CTCTCTGGATATGATAGTCTGACAGAGTACGGCCAGCTTCCAGCTGTTTGCCCGCAAAAA 14262579 Query 34852 TTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATG 34911 | || || |||||||| |||| | |||||||||| || || |||||| || Sbjct 14262580 TCAGACGCTGCTGGTCAGGCGGGATGTCCTCCTTGTCTTGGATTTTGGCTTTGAC--ATT 14262637 Query 34912 CT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 || || | |||| || |||||| |||| ||| ||| | || ||||| || |||||||| Sbjct 14262638 CTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGTTCTTGCCCGTCAGGGTCTTCAC 14262697 Query 34970 AAAGATCTGCAT 34981 |||||||||||| Sbjct 14262698 AAAGATCTGCAT 14262709 >seq7823 Length=12955506 Score = 98.7 bits (108), Expect = 6e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || ||||||| | | ||||| ||| | || |||||||| ||||| || || ||| Sbjct 3355552 CCACCCCTCAGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAA 3355493 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | || |||| |||||||| || || ||||| || || | |||||||| | || Sbjct 3355492 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAAATGAGCCTCTGCTGGTCAGGGGGG 3355433 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||| || || ||||| || ||| | | || | |||| || ||| || Sbjct 3355432 ATGCCCTCTTTATCTTGGATCTTGGCCTTCACGTTTTCGATGGTGTCACTGGGCTCCACC 3355373 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || | ||| ||||| || || || || |||||||| ||||||||||| Sbjct 3355372 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 3355326 >seq7857 Length=43258702 Score = 93.3 bits (102), Expect = 3e-14 Identities = 139/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||| |||||||| || ||||| | || |||| |||||||| || || ||||| Sbjct 31543709 TCTTTCTGGATGTTATAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAA 31543768 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | |||||||| | || | ||||| || || ||||| || || | Sbjct 31543769 ATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGGATCTTGGCCTTCACATTT 31543828 Query 34911 GCTATCGAT-TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | || ||| |||| || ||| || || | || ||||| || || || || |||||||| Sbjct 31543829 TCGAT-GATGTCACTGGGCTCCACCTCCAGGGGGATGGTCTTGCCGGTTAGGGTCTTCAC 31543887 Query 34970 AAAGATCTGCATATT 34984 ||||||||||| || Sbjct 31543888 GAAGATCTGCATTTT 31543902 >seq7828 Length=21597463 Score = 93.3 bits (102), Expect = 3e-14 Identities = 149/211 (71%), Gaps = 5/211 (2%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| |||||||| || |||||||| || || | | |||| || Sbjct 10995417 ACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACAGCCATCTTCT 10995358 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||| ||| || ||||| | || | |||||||| |||| | ||||||| ||| Sbjct 10995357 AGCTATTTGCCCGCAAAAGTCAGACACTGCTGGTCAGGCGGGATGCCCTCCTGGTCTTGG 10995298 Query 34893 ATCTTCTGTTTGACGGATGCTA--TCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 || || |||||| || || | | |||| || ||| || || | ||| ||||| | Sbjct 10995297 ATTTTGGCTTTGAC--ATTCTCAGTGGTGTCACTGGGCTCGACCTC-AGGGTGATGGTCT 10995241 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || ||||| | |||||||||||||||||| Sbjct 10995240 TGCCTGTGAGGGCCTTCACAAAGATCTGCAT 10995210 >seq20 Length=2862499 Score = 93.3 bits (102), Expect = 3e-14 Identities = 151/211 (72%), Gaps = 5/211 (2%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAG-GCTTCGTTCATCATC 34831 |||||||| | ||| |||||||| || |||||| | || | || | | |||| || Sbjct 2689025 ACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGCCTGAGGGAGCGTGGC-CATCCTC 2689083 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||||| || ||| | || || | |||||||| |||| | ||||||||||| Sbjct 2689084 -AGCTGTTGGCCTGCAGAAATCAGACACTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTG 2689142 Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT-TCACCGGCCTCAACATCGACGGTTATGGTTT 34950 || || |||||| | || | || |||| || ||| || |||| ||| || || | Sbjct 2689143 GATTTTGGCTTTGACATTTT-TAACAATGTCACGGGGCTCGACCTCGAGGGTGATCGTCT 2689201 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | ||| | ||||||||||||||||||||||| Sbjct 2689202 TGCCCATCAGAGTCTTCACAAAGATCTGCAT 2689232 >seq7869 Length=26620976 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 5/212 (2%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 ||||||| | ||| |||||||| | ||| | ||| || || | ||| ||| ||| Sbjct 25200182 ACCAAGTTCAGGGTGGACTCTTTCTGTACGTTGTGGTCTGAGAGAGTGCGTCCATTGTCC 25200123 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| || ||||| | || | |||||||| || | | |||||||||| Sbjct 25200122 AGCTGTTTGCCCGCAAAACTGAGATGCTGCTGGTCAGGCAGGATGTCCTCCTTGTC---- 25200067 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 | | |||||| | | || | |||| || ||| | | || ||| ||||| ||| Sbjct 25200066 -TTGGATTTTTGACATTTTCAATGGTGTCACTGGGCTCGGCCTTGAGGGTGATGGTCTTT 25200008 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 ||| || |||||||||||||||||||| || Sbjct 25200007 CCCACTAGGGTCTTCACAAAGATCTGCATCTT 25199976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324602454652416