Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq9 123 2e-23
seq7846 122 6e-23
seq7782 111 1e-19
seq7823 98.7 6e-16
seq7857 93.3 3e-14
seq7828 93.3 3e-14
seq20 93.3 3e-14
seq7869 86.0 4e-12
>seq9
Length=2205763
Score = 123 bits (136), Expect = 2e-23
Identities = 157/213 (74%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | ||| |||||||| || |||||||| || || | || |||| |||
Sbjct 1749343 ACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCATCTTCC 1749402
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|||||||| || ||||| | || || |||||||| |||| | |||||||||||
Sbjct 1749403 AGCTGTTTGCCCGCAAAAACCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTGG 1749462
Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACA--TCGACGGTTATGGT 34948
|| || |||||| || || || | |||| || ||| ||| || | ||| |||||
Sbjct 1749463 ATTTTGGCTTTGAC--ATTCTCAATGGTGTCACTGGGCTCGACACCTCAAGGGTGATGGT 1749520
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| ||||| || ||||||||||||||||||||
Sbjct 1749521 CTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 1749553
>seq7846
Length=12828309
Score = 122 bits (134), Expect = 6e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
||||||||||| | || |||||||| | ||| || ||||| ||||| ||||| ||
Sbjct 9163009 CCTCCCCTCAAGCGCAGGACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCTGAC 9163068
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
||| | || | || ||||||||||| |||||||| || | | |||||||| | ||
Sbjct 9163069 AGGGTGCGCCCGTCCTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCGGGGGGG 9163128
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934
| ||||| ||||| |||||| |||||| | || | |||| || ||| ||
Sbjct 9163129 ATGCCCTCTTTGTCCTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACC 9163188
Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| | ||| ||||| || || || | |||||||| |||||||||||
Sbjct 9163189 TCCAGGGTGATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCAT 9163235
>seq7782
Length=35566003
Score = 111 bits (122), Expect = 1e-19
Identities = 141/192 (73%), Gaps = 4/192 (2%)
Strand=Plus/Plus
Query 34792 CTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATA 34851
|| |||| || | |||||| || || | || || | ||||||||||| || ||||| |
Sbjct 14262520 CTCTCTGGATATGATAGTCTGACAGAGTACGGCCAGCTTCCAGCTGTTTGCCCGCAAAAA 14262579
Query 34852 TTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATG 34911
| || || |||||||| |||| | |||||||||| || || |||||| ||
Sbjct 14262580 TCAGACGCTGCTGGTCAGGCGGGATGTCCTCCTTGTCTTGGATTTTGGCTTTGAC--ATT 14262637
Query 34912 CT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
|| || | |||| || |||||| |||| ||| ||| | || ||||| || ||||||||
Sbjct 14262638 CTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGTTCTTGCCCGTCAGGGTCTTCAC 14262697
Query 34970 AAAGATCTGCAT 34981
||||||||||||
Sbjct 14262698 AAAGATCTGCAT 14262709
>seq7823
Length=12955506
Score = 98.7 bits (108), Expect = 6e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| ||||||| | | ||||| ||| | || |||||||| ||||| || || |||
Sbjct 3355552 CCACCCCTCAGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAA 3355493
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
|| | || |||| |||||||| || || ||||| || || | |||||||| | ||
Sbjct 3355492 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAAATGAGCCTCTGCTGGTCAGGGGGG 3355433
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934
| ||||| || || ||||| || ||| | | || | |||| || ||| ||
Sbjct 3355432 ATGCCCTCTTTATCTTGGATCTTGGCCTTCACGTTTTCGATGGTGTCACTGGGCTCCACC 3355373
Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| | ||| ||||| || || || || |||||||| |||||||||||
Sbjct 3355372 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 3355326
>seq7857
Length=43258702
Score = 93.3 bits (102), Expect = 3e-14
Identities = 139/195 (71%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|||||||| |||||||| || ||||| | || |||| |||||||| || || |||||
Sbjct 31543709 TCTTTCTGGATGTTATAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAA 31543768
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || | |||||||| | || | ||||| || || ||||| || || |
Sbjct 31543769 ATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGGATCTTGGCCTTCACATTT 31543828
Query 34911 GCTATCGAT-TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| || ||| |||| || ||| || || | || ||||| || || || || ||||||||
Sbjct 31543829 TCGAT-GATGTCACTGGGCTCCACCTCCAGGGGGATGGTCTTGCCGGTTAGGGTCTTCAC 31543887
Query 34970 AAAGATCTGCATATT 34984
||||||||||| ||
Sbjct 31543888 GAAGATCTGCATTTT 31543902
>seq7828
Length=21597463
Score = 93.3 bits (102), Expect = 3e-14
Identities = 149/211 (71%), Gaps = 5/211 (2%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | ||| |||||||| || |||||||| || || | | |||| ||
Sbjct 10995417 ACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACAGCCATCTTCT 10995358
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|||| ||| || ||||| | || | |||||||| |||| | ||||||| |||
Sbjct 10995357 AGCTATTTGCCCGCAAAAGTCAGACACTGCTGGTCAGGCGGGATGCCCTCCTGGTCTTGG 10995298
Query 34893 ATCTTCTGTTTGACGGATGCTA--TCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950
|| || |||||| || || | | |||| || ||| || || | ||| ||||| |
Sbjct 10995297 ATTTTGGCTTTGAC--ATTCTCAGTGGTGTCACTGGGCTCGACCTC-AGGGTGATGGTCT 10995241
Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| || ||||| | ||||||||||||||||||
Sbjct 10995240 TGCCTGTGAGGGCCTTCACAAAGATCTGCAT 10995210
>seq20
Length=2862499
Score = 93.3 bits (102), Expect = 3e-14
Identities = 151/211 (72%), Gaps = 5/211 (2%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAG-GCTTCGTTCATCATC 34831
|||||||| | ||| |||||||| || |||||| | || | || | | |||| ||
Sbjct 2689025 ACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGCCTGAGGGAGCGTGGC-CATCCTC 2689083
Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891
||||||| || ||| | || || | |||||||| |||| | |||||||||||
Sbjct 2689084 -AGCTGTTGGCCTGCAGAAATCAGACACTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTG 2689142
Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT-TCACCGGCCTCAACATCGACGGTTATGGTTT 34950
|| || |||||| | || | || |||| || ||| || |||| ||| || || |
Sbjct 2689143 GATTTTGGCTTTGACATTTT-TAACAATGTCACGGGGCTCGACCTCGAGGGTGATCGTCT 2689201
Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| ||| | |||||||||||||||||||||||
Sbjct 2689202 TGCCCATCAGAGTCTTCACAAAGATCTGCAT 2689232
>seq7869
Length=26620976
Score = 86.0 bits (94), Expect = 4e-12
Identities = 146/212 (69%), Gaps = 5/212 (2%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
||||||| | ||| |||||||| | ||| | ||| || || | ||| ||| |||
Sbjct 25200182 ACCAAGTTCAGGGTGGACTCTTTCTGTACGTTGTGGTCTGAGAGAGTGCGTCCATTGTCC 25200123
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|||||||| || ||||| | || | |||||||| || | | ||||||||||
Sbjct 25200122 AGCTGTTTGCCCGCAAAACTGAGATGCTGCTGGTCAGGCAGGATGTCCTCCTTGTC---- 25200067
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
| | |||||| | | || | |||| || ||| | | || ||| ||||| |||
Sbjct 25200066 -TTGGATTTTTGACATTTTCAATGGTGTCACTGGGCTCGGCCTTGAGGGTGATGGTCTTT 25200008
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
||| || |||||||||||||||||||| ||
Sbjct 25200007 CCCACTAGGGTCTTCACAAAGATCTGCATCTT 25199976
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324602454652416
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |