Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq7767 313 3e-80
seq7820 235 6e-57
seq7786 120 3e-22
seq7842 111 2e-19
seq7870 107 2e-18
>seq7767
Length=50048226
Score = 313 bits (346), Expect = 3e-80
Identities = 640/939 (68%), Gaps = 19/939 (2%)
Strand=Plus/Minus
Query 18612 TTAAAAATCAACATCCAAAGAAAAAGAATTCTCTTC-ATTAGAATTCATTACTCCCATTT 18670
||| || ||| ||||||| | ||||||||||| || ||| || ||| ||||||||
Sbjct 16036801 TTAGAAGTCAGCATCCAAGGTAAAAGAATTCTGTTGGATTTGA---CATCACTCCCATCC 16036745
Query 18671 TTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACATT 18730
| ||||| || | ||||| || |||||||| || | || || | ||| ||| |
Sbjct 16036744 TCTGATACTCACCTACTCTCTTCTCAAAGAAGTT-----TCCCTTCCAGTGAAATATTCT 16036690
Query 18731 CCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGTA 18790
|||| || ||||||||||||| ||| | | | || || |||| || | | |
Sbjct 16036689 CCATGAAGTCAAATGGATTTTCTACTCTGAAAACCTTGCCAAAACCTAGCTCCAGCATAA 16036630
Query 18791 GTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAATT 18850
||| | || ||||| | |||| | ||||| | |||||||| || || | |
Sbjct 16036629 GTCGGTGTGCCACAAACTCAATACACTGCTTCATTAACGTGCAATTCATCCCAATGAGCT 16036570
Query 18851 TAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAATAG 18910
| | || | | || || || || | || ||||| || || | | ||| | ||
Sbjct 16036569 TCAGGGGCAAGGTCTCCGTGAGGAACCCCTGCTCTATCCGAACGGCAT-TAATA-ATTAT 16036512
Query 18911 ATACAACTCTATCTTCATTAGGAGGGTA-TAGA--AGATGTTTAAACATCAAACATGCAA 18967
| | | || ||| | || | ||| | | || || ||||| ||||||| || ||||
Sbjct 16036511 TTCCTTCACTCTCTGC-TTGGAAGGTTTGTGGACCAGGTGTTTGAACATCAGGCAGGCAA 16036453
Query 18968 AATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCA 19027
| ||||| |||| ||||| ||||| || || | |||||| ||||| | |||||||
Sbjct 16036452 AGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAACATGGGGCCAGGCA 16036393
Query 19028 TCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTT 19087
|||| | | ||| || | ||||||||| | ||||| || ||||||||||| || ||||
Sbjct 16036392 TCAGGTCACGTTTCTTGAGCCAGAATATCGTCGCAAAAGAACCAGAAAAGAAGATTCCTT 16036333
Query 19088 CTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATT 19147
| || || ||||| | || | | ||| || || |||| || || | | |||| |
Sbjct 16036332 CCACAGCAGCAAAGTCCACAACCCGTTCCCCGTAGGTAGCCTCTTTGTCCCCAGTCCAAT 16036273
Query 19148 TCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGAT 19207
|| ||||| || |||||||| |||||||| ||||||||||| | | || || |||
Sbjct 16036272 GCAAGGCCCAGTCTGCCTTCTTCTTTACACAAGGCATTGTCTCGAGGGCGTTGAAGAGAA 16036213
Query 19208 ACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAAT 19267
| | || | | |||||||||||| | || || | | ||||||||| || ||||
Sbjct 16036212 ATTCCCTTTCTTTGGAATCTTTAACATAAGTGTCAATGAGGAGACTGTACATCTCAGAAT 16036153
Query 19268 GAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTT 19327
| || ||||| || || || | || || || ||||| | |||||||| ||||| ||||
Sbjct 16036152 GGATGTTTTCCATGGCAATTCGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTT 16036093
Query 19328 CACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATG 19387
| | ||| | || ||||| |||||||| ||||| |||||||| | ||||| || |
Sbjct 16036092 CTTGGCTAAACCGCTCCACCAAGTTTTCATTTACTATGCCATCACTCGGCGCAAAGAAAG 16036033
Query 19388 CTAATACATGTTTAATAAAATGTTTTTCATCTGAGG-TTAATGTATTCC-AATCATTAAT 19445
| | || || ||| || || | || || ||| || | | ||||| | | |||
Sbjct 16036032 CCAGAAC--GTGGGATAGAAAGTATCTCTCCTCAGGCTTCAGGGATTCCTGGTGCTGAAT 16035975
Query 19446 ATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACAT 19505
|| || || | ||| || |||||| |||||||||| |||||||| ||||| | ||||||
Sbjct 16035974 GTCCTTGGAAAGATCCACCTCTTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTCATACAT 16035915
Query 19506 GTTCCATATATCACGATATTGTATAGGAAATATAACAAA 19544
| ||| |||||| | || | ||| || || |||||
Sbjct 16035914 CTGCCAAATATCATGGTACCCGACAGGGAAGATGACAAA 16035876
>seq7820
Length=31847680
Score = 235 bits (260), Expect = 6e-57
Identities = 630/947 (67%), Gaps = 21/947 (2%)
Strand=Plus/Minus
Query 18612 TTAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATT--CATTACTCCCATT 18669
||| || ||| ||||| | ||||||||||| | || || || ||| ||||| ||
Sbjct 14844002 TTATAAGTCAGTATCCACGGTAAAAGAATTCTTTG--TTGGACTTGACATCACTCCTATC 14843945
Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729
| ||||| | | | |||| || |||||||| ||||| || || || | ||| |||
Sbjct 14843944 CTCTGATACTGGCCTCCTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAAATATTC 14843885
Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789
||| ||| ||||||||||||| ||| | | | || | || |||| ||| |
Sbjct 14843884 TCCCTAAGGTCAAATGGATTTTCTACTCTGGAAACCTTGCTAAAACCTAGTTCCTACCTA 14843825
Query 18790 AGTCTATCCGCTACAAATTTAATATA-TGTGTTCATCATATCACAATTCATTCCTATTAA 18848
|||| || || | |||| |||||| || || | | | || ||||| || || |
Sbjct 14843824 AGTCAGTCTGCCATGAATTCAATATACTGCTTTACTAACGTG-CAGTTCATCCCAATGAG 14843766
Query 18849 TTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAAT 18908
|| | || | || |||| || || || || ||||| | || || | ||||| | |
Sbjct 14843765 CTTCGCGGGCAAGGCCTCTGGGAGGAACTCCTGGTCTATCCTAACGGCAT-TGATA-ATT 14843708
Query 18909 AGATACAACTCTATCTTCATTAGGAGGGT-ATAGA--AGATGTTTAAACATCAAACATGC 18965
| | | | || ||| | | | ||| | || || || ||||| ||||||| || ||
Sbjct 14843707 ATTTCCTTCACTCTCTGCTCT-GAAGGTTTATGGACCAGGTGTTTGAACATCAGGCAGGC 14843649
Query 18966 AAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAAT-GTTAAACCAG 19024
||| | |||| ||||| ||||| || || | ||||| ||||| | | ||||
Sbjct 14843648 AAAGTTGTGGTGTAAACCCTCATCTCTGCTAATAAGCTCATTGGAAAACCGCGAGGCCAG 14843589
Query 19025 GCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATAC 19084
||||||| | | ||| || | ||||||||| || ||| | || ||| ||||| | || |
Sbjct 14843588 GCATCAGGCTGCATTTCTTGAGCCAGAATATCGACGCAGAAGAACCAAAAAAGGAGATTC 14843529
Query 19085 CTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCC 19144
|||| || ||||| | || | ||| || || |||| || || | || ||
Sbjct 14843528 CTTCCGTGGCAGCAAAGTCCACATCCCATTCCCCGTAGGTAGCCTCTTTGTCCCCAACCC 14843469
Query 19145 ATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATA 19204
| || ||||| || |||||||| || |||| ||||||||||| || | || || |
Sbjct 14843468 AACGCAAGGCCCAGTCTGCCTTCTTCCTTCCACAAGGCATTGTCTCGATGGTGTTGAAGA 14843409
Query 19205 GATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTG 19264
|| | ||| | | |||||||| ||| | || | | | ||| |||| || |
Sbjct 14843408 GAAATTCTGTCTCTTTGGAATCTTTAATATAAGTGTCAGTGAGGAGACTACACATCTCAG 14843349
Query 19265 AATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTA 19324
|||| || ||||| || || || || || || || ||||| | |||||||| |||| |
Sbjct 14843348 AATGGATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCAGGCTTCTGTCATCTCAA 14843289
Query 19325 CTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAA 19384
|||| | | | | || ||||| |||||||| ||||| ||| |||| || ||||| |
Sbjct 14843288 CTTCTTGGCCACACCGCTCCACCAAGTTTTCATTTACTATGCCAACACTCGCCGCAAAGA 14843229
Query 19385 ATGC--TAAT----ACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTATT-CCAA 19437
| || ||| || || ||||||| | | || || | | || | ||| |||
Sbjct 14843228 AAGCCAGAATGTGAACGTGGGGTATAAAATCTCTCTCCTCAG-GCTTCAGCGATTCCCAG 14843170
Query 19438 TCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTT 19497
| | ||| || || || | || || |||||| |||||||||| |||||||| |||||
Sbjct 14843169 TGTTGAATGTCCTTGGAAAGATTCACCTCTTCAGCTGTCCAAAAGGAAGCCTCAGCTTTC 14843110
Query 19498 TTATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAA 19544
||| | || | ||| | |||| | || | ||||| || || |||||
Sbjct 14843109 TTACATATCTGCCAAAGATCATGGTACTTCATAGGGAAGATGACAAA 14843063
>seq7786
Length=83011774
Score = 120 bits (132), Expect = 3e-22
Identities = 107/134 (80%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 18985 TCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttttt 19044
|| ||||| || || | |||||| ||||| || | || ||||| || |||||||| |||
Sbjct 48121152 TCATCTCTGCTGATGAGTTCATTGGAAAACGTGAGTCCGGGCATGAGACCTCTTTTCTTT 48121211
Query 19045 AACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCA 19104
| ||||||||||| |||||| ||||| || ||||| || |||||||| || ||||||||
Sbjct 48121212 AGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAATCCCTTCTACAGCAGCAAAAGCC 48121271
Query 19105 ACTAGTCTTTCTCC 19118
|| | |||||| ||
Sbjct 48121272 ACCACTCTTTCCCC 48121285
Score = 82.4 bits (90), Expect = 9e-11
Identities = 66/80 (83%), Gaps = 0/80 (0%)
Strand=Plus/Plus
Query 18672 TTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACATTC 18731
|||||| || ||||||| ||| ||||||||||| ||||| || ||||| || || ||
Sbjct 48108402 TTGATACTCTGCAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTCTAAAGAAATGTTCTC 48108461
Query 18732 CATAAAATCAAATGGATTTT 18751
|||||||||||| |||||||
Sbjct 48108462 CATAAAATCAAAGGGATTTT 48108481
>seq7842
Length=42459490
Score = 111 bits (122), Expect = 2e-19
Identities = 106/136 (78%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 18983 CCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttt 19042
|||| ||||| || || | |||||| ||||| || | ||||||||||| || | ||| |
Sbjct 7548465 CCTCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCAGGCATCAGGCCGCGTTTCT 7548406
Query 19043 ttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAG 19102
| | ||||||||| || ||||| || ||||||||||| || ||||| || || |||||||
Sbjct 7548405 TGAGCCAGAATATTGACGCAAAAGAACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAAG 7548346
Query 19103 CAACTAGTCTTTCTCC 19118
| || | | ||||||
Sbjct 7548345 CCACAACCCGTTCTCC 7548330
Score = 109 bits (120), Expect = 6e-19
Identities = 113/146 (77%), Gaps = 4/146 (3%)
Strand=Plus/Minus
Query 18612 TTAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATT--CATTACTCCCATT 18669
||| || ||| ||||||| | ||||||||||||| || || || ||| ||||||||
Sbjct 7549967 TTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTG--TTGGACTTGACATCACTCCCATC 7549910
Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729
| ||||| ||| | ||||| || |||||||| ||||| || || || | ||| |||
Sbjct 7549909 CTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAAATATTC 7549850
Query 18730 TCCATAAAATCAAATGGATTTTTTAC 18755
|||||||| ||||||||||||| |||
Sbjct 7549849 TCCATAAAGTCAAATGGATTTTCTAC 7549824
>seq7870
Length=10551609
Score = 107 bits (118), Expect = 2e-18
Identities = 104/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 47328 TGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGAT 47387
||||||||||| || | ||||| || |||| || || || ||||| ||||| || ||
Sbjct 10335165 TGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTATAAGGTTCAATGGAC 10335106
Query 47388 TCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTA 47447
||||||||||| | ||| ||||||||||| || |||||||| | |||| | ||| ||
Sbjct 10335105 TCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAACTG 10335046
Query 47448 TTTCTTACTCCATA 47461
||||||| |||||
Sbjct 10335045 TTTCTTATACCATA 10335032
Score = 100 bits (110), Expect = 3e-16
Identities = 126/172 (73%), Gaps = 6/172 (3%)
Strand=Plus/Minus
Query 47050 TCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGGTTCTGAAATATGAATAT 47109
|||| || |||||||||||||| || | ||| ||| |||| || | ||| || || |
Sbjct 10337845 TCCAGCCGTAGAAATGCATACTGGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATGT 10337786
Query 47110 TAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCC 47169
| | |||||| || |||||||| || |||||||| ||||||||||| | || |||
Sbjct 10337785 TCAAAGATTGGCTTTGATCAATGAAAGCACCTCTTTCAGCTGCCATCT---TAAGAACGG 10337729
Query 47170 TT---TGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTCTTCTGG 47218
|| |||| || ||||| || || ||||||| ||| || | ||| || ||
Sbjct 10337728 TTTTCTGTGAAATTTCCCACACAGTCTTATAAAGTTGCTTCAGGTCATCAGG 10337677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562053488494080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |