Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_016448.1
Length=196691
Score E
Sequences producing significant alignments: (Bits) Value
seq7756 122 1e-22
>seq7756
Length=5702846
Score = 122 bits (134), Expect = 1e-22
Identities = 176/248 (71%), Gaps = 3/248 (1%)
Strand=Plus/Plus
Query 2207 ACTGAAGAACATTCAGGTGAGCAATCACAGTCAACTGTCTCAGAATCGGATCTGCGAGAT 2266
||||| |||| | || | |||||||| |||||| ||| | ||| ||| |||||
Sbjct 658801 ACTGAGGAACTTACAAATTGCCAATCACACGTGGCTGTCTGAGATTGGGACCTGTGAGAT 658860
Query 2267 CCATCTGACCTGTTCTGTCGAGGATCCCAATGACAACATCTCCTTCAAATGGGAGGCCTT 2326
||| |||||||| ||||| ||| || | ||||||| | ||| | | ||| ||| |
Sbjct 658861 CCACCTGACCTGCTCTGTAGAGAATTCAAATGACACCTTCT---TAAGGTGGCAGGTTGT 658917
Query 2327 GGGCAAGACGCTTCTACGCGAGCCCAACCTCACGACCTCCTGGGACCCCAGGAACAGCAG 2386
|| || ||| | || || | |||||||| | ||||||||||||||||| |||
Sbjct 658918 AGGAAACACGTCTATAAATGAAGCAAACCTCACTATTTCCTGGGACCCCAGGAATTCCAG 658977
Query 2387 TGAGCAGAACTACACGTGCATCGCCGAAAACGCTGTGAGCAATCTCTCTTTCACGGTCTC 2446
||| ||||| | ||| ||| | || || || |||| |||||| | || ||| | |||||
Sbjct 658978 TGAACAGAAGTTCACCTGCGTAGCTGAGAATACTGTCAGCAATATATCCTTCTCTGTCTC 659037
Query 2447 GGCCCAGA 2454
||||||
Sbjct 659038 CACCCAGA 659045
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629221278533120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |