Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_016448.1 Length=196691 Score E Sequences producing significant alignments: (Bits) Value seq7756 122 1e-22 >seq7756 Length=5702846 Score = 122 bits (134), Expect = 1e-22 Identities = 176/248 (71%), Gaps = 3/248 (1%) Strand=Plus/Plus Query 2207 ACTGAAGAACATTCAGGTGAGCAATCACAGTCAACTGTCTCAGAATCGGATCTGCGAGAT 2266 ||||| |||| | || | |||||||| |||||| ||| | ||| ||| ||||| Sbjct 658801 ACTGAGGAACTTACAAATTGCCAATCACACGTGGCTGTCTGAGATTGGGACCTGTGAGAT 658860 Query 2267 CCATCTGACCTGTTCTGTCGAGGATCCCAATGACAACATCTCCTTCAAATGGGAGGCCTT 2326 ||| |||||||| ||||| ||| || | ||||||| | ||| | | ||| ||| | Sbjct 658861 CCACCTGACCTGCTCTGTAGAGAATTCAAATGACACCTTCT---TAAGGTGGCAGGTTGT 658917 Query 2327 GGGCAAGACGCTTCTACGCGAGCCCAACCTCACGACCTCCTGGGACCCCAGGAACAGCAG 2386 || || ||| | || || | |||||||| | ||||||||||||||||| ||| Sbjct 658918 AGGAAACACGTCTATAAATGAAGCAAACCTCACTATTTCCTGGGACCCCAGGAATTCCAG 658977 Query 2387 TGAGCAGAACTACACGTGCATCGCCGAAAACGCTGTGAGCAATCTCTCTTTCACGGTCTC 2446 ||| ||||| | ||| ||| | || || || |||| |||||| | || ||| | ||||| Sbjct 658978 TGAACAGAAGTTCACCTGCGTAGCTGAGAATACTGTCAGCAATATATCCTTCTCTGTCTC 659037 Query 2447 GGCCCAGA 2454 |||||| Sbjct 659038 CACCCAGA 659045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629221278533120