Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq7767 91.5 1e-13
seq7828 86.0 5e-12
seq9 86.0 5e-12
seq7857 84.2 2e-11
>seq7767
Length=50048226
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 48556 ACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGT 48615
|||| | ||| || || ||| |||||||| ||||| ||||| | | | || | || |
Sbjct 33066746 ACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATCTT 33066805
Query 48616 CCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGC 48675
||| ||||| || ||||| ||||||| ||| ||||| | |||| || ||||| ||
Sbjct 33066806 CCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCT 33066865
Query 48676 TAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTT 48735
|||||| |||||| | | | || || | || ||||| | || || || |
Sbjct 33066866 GAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGATCAACCTCGAGGGTGATGGTCT 33066925
Query 48736 TTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770
| ||||| | ||||| || |||||||||||| ||
Sbjct 33066926 TCCCCGTAAGGGTTTTCACGAAAATCTGCATCTTG 33066960
>seq7828
Length=21597463
Score = 86.0 bits (94), Expect = 5e-12
Identities = 149/217 (69%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613
|||||| | ||| || ||| ||| |||||||| ||||| ||||| | | || | ||
Sbjct 14213374 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGGACGTCCATC 14213433
Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
|||| ||||| || ||||| ||||||| ||| ||||| | |||| || ||||| |
Sbjct 14213434 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATT 14213493
Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733
|||||| |||| | | | | || || | || ||||| | || || ||
Sbjct 14213494 CTGAATCTTGGCCTTTATATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGATGGT 14213553
Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770
|| ||||| | ||||| || |||||||||||| ||
Sbjct 14213554 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCATCTTG 14213590
>seq9
Length=2205763
Score = 86.0 bits (94), Expect = 5e-12
Identities = 158/231 (68%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598
||| |||| ||| || | |||||| || || ||| |||||| || ||||| || || ||
Sbjct 1749324 GCCACCCCGTAGGCGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGA 1749383
Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658
||| | || | || |||| ||| || || ||||| | ||| ||||| || || | ||
Sbjct 1749384 CAGAGTACGGCCATCTTCCAGCTGTTTGCCCGCAAAAACCAGACGCTGCTGGTCAGGCGG 1749443
Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTC--C 48716
| |||||||||||| || || ||| ||| | | | || | ||| |
Sbjct 1749444 GATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCGAC 1749503
Query 48717 ACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767
||||| | || || || || ||||||| || || ||||| |||||||||
Sbjct 1749504 ACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATC 1749554
>seq7857
Length=43258702
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 48555 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCG 48614
||||| | ||| || ||| ||| |||||| | ||||| ||||| ||| | || | ||
Sbjct 24178166 AACACAAGATGAAGAGTGGACTCCTTTTGAGTGTTGTAGTCAGACAGAGTGCGTCCATCT 24178107
Query 48615 TCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCG 48674
|||| ||||| || ||||| |||| || ||| ||||| | |||| || ||||| ||
Sbjct 24178106 TCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCAGGAGGAATTCCTTCCTTATCC 24178047
Query 48675 CTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTT 48734
|||||| |||||| | | || || | || |||| | || || ||
Sbjct 24178046 TGAATCTTGGCCTTTACATTTTGTATTGTATCCGAGGGTTCAGCCTCGAGAGTGATGGTC 24177987
Query 48735 TTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770
|| ||| | | |||||| || |||||||||||| ||
Sbjct 24177986 TTCCCCATAAGAGTTTTCACGAAAATCTGCATCTTG 24177951
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380901052846656
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |