Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq7872 172 1e-37
seq7767 141 2e-28
seq7763 141 2e-28
seq7820 105 1e-17
seq7870 91.5 3e-13
>seq7872
Length=10206820
Score = 172 bits (190), Expect = 1e-37
Identities = 184/243 (76%), Gaps = 0/243 (0%)
Strand=Plus/Plus
Query 241385 AGCTGCTGACAGCCTTGGCACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGG 241444
||| |||| ||||| | || | ||| || ||||| ||||||||| |||||||||||
Sbjct 1404666 AGCAGCTGGCAGCCGTTGCTGACGTGGGTCATGACCTTCTGTTTGAGCTGGGCCACCTGC 1404725
Query 241445 TCCCGCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACT 241504
||||| || | || || | ||||| || ||||| || | |||||| ||||||
Sbjct 1404726 TCCCGGAGGAGCCCAGCAGTGCTCGACAGCCCCGCGTTCTCGGCCTTGAGTGTCTTCACC 1404785
Query 241505 TTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAG 241564
|| |||||||| ||||||||||| ||||| || ||| ||||| |||||||| ||||
Sbjct 1404786 TTGTCCTCCAGGCGCGCGATGCGCTCCAGCTTCCGCTTCCGGCACTTGGTGGCCGCCAGC 1404845
Query 241565 CGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGA 241624
|||||||| || | ||| || ||| | |||||||| |||||||| ||||| | ||| ||
Sbjct 1404846 CGGTTCCGCAGCCGCTTGCGCTCCACTTTGATGCGCTCCTGGTCTTCCATATTGATGGGG 1404905
Query 241625 GAC 241627
|||
Sbjct 1404906 GAC 1404908
>seq7767
Length=50048226
Score = 141 bits (156), Expect = 2e-28
Identities = 376/570 (66%), Gaps = 11/570 (2%)
Strand=Plus/Minus
Query 48002 TTCATGCCTATGAGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACG 48061
||||| || ||||| || |||||| | || ||||| ||| ||| ||||||| | |||
Sbjct 16036585 TTCATCCCAATGAGCTTCAGGGGCAAGGTCTCCGTGAGGAACCCCTGCTCTATCCGAACG 16036526
Query 48062 GCTTCCCCCACAATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCA 48121
|| | | || | ||| || | || || ||||||| | |||||| |||
Sbjct 16036525 GCATTAATAATTATTTCCTTCACTCTCTGCTTGGAAGGTTTGTGGACCAGGTGTTTGA-- 16036468
Query 48122 TAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAG 48181
| | || |||||||||||| | ||| || || || || | ||| || || | |||||
Sbjct 16036467 -ACATCAGGCAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAA 16036409
Query 48182 AAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCA 48241
|| | | |||||||| | | | | ||||||||||| || | ||| ||||| |||
Sbjct 16036408 AACATGGGGCCAGGCATCAGGTCACGTTTCTTGAGCCAGAATATCGTCGCAAAAGAACCA 16036349
Query 48242 GAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTC 48301
|| |||||||| || ||||| || || || | | || || ||| | | ||| |
Sbjct 16036348 GAAAAGAAGATTCCTTCCACAGCAGCAAAGTCCACAACCCGTTCCCCGTAGGTAGCCTCT 16036289
Query 48302 TTGT-CTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTC 48360
|||| | || | | | ||| |||||||||||||||||||| | || ||||| |||||
Sbjct 16036288 TTGTCCCCAGTCCAATGCAAG-GCCCAGTCTGCCTTCTTCTTTACACAAGGCATTGTCTC 16036230
Query 48361 TATGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAG 48417
| ||| |||||| | | || | || |||||| || | |||| ||
Sbjct 16036229 GAGGGCGTTGAAGAGAAATTCCCTTTCTTTGGAATCTTTAACATAAGTGTCAATGAGGAG 16036170
Query 48418 CTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCT 48477
| |||||||||||| || | || || || || || |||| || ||||| |
Sbjct 16036169 ACT---GTACATCTCAGAATGGATGTTTTCCATGGCAATTCGGAAGCCATAGAAACAGCG 16036113
Query 48478 GGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCC 48537
||| || | ||| |||||| | || | ||||| || || ||||| ||||| ||
Sbjct 16036112 GGCTTCTGTAATCTGAACTTCTTGGCTAAACCGCTCCACCAAGTTTTCATTTACTATGCC 16036053
Query 48538 ATCTGAAGCAGCAAAGAAGGCAAGGACATG 48567
||| | |||||||| || || || ||
Sbjct 16036052 ATCACTCGGCGCAAAGAAAGCCAGAACGTG 16036023
>seq7763
Length=5490626
Score = 141 bits (156), Expect = 2e-28
Identities = 159/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 241415 AGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGT 241474
||||||| ||| ||||| || |||||||| || ||||| | | ||| || | |||
Sbjct 2487453 AGGACCTTCTGCTTGAGCTGCGCCACCTGCTCGCGCAGCAGGCTCGCTGTGGACGCCAGC 2487394
Query 241475 CCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGT 241534
| | ||| | ||||||| ||||||||||||||| || |||| |||||| |||||
Sbjct 2487393 TCCGTGTTCTGGCTCTTGAGCGTCTTCACTTTCTCCTCGAGGCGCGAGATGCGCTCCAGC 2487334
Query 241535 TTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTG 241594
|||||| |||||| || | ||| || | |||||| || || | ||| || ||||||||
Sbjct 2487333 TTGCGCTTGCGGCACTTAGAGGCAGCGATGCGGTTGCGCAGCCGCTTGCGCTCCGCCTTA 2487274
Query 241595 ATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627
||||| ||||| ||||||||||| || |||
Sbjct 2487273 ATGCGCTCCTGCGTGTCCATGTCGATGGGCGAC 2487241
>seq7820
Length=31847680
Score = 105 bits (116), Expect = 1e-17
Identities = 371/569 (65%), Gaps = 18/569 (3%)
Strand=Plus/Minus
Query 48001 GTTCATGCCTATGAGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCAC 48060
|||||| || ||||| | ||||||| |||| || ||| ||||||| |||||| ||
Sbjct 14843780 GTTCATCCCAATGAGCTTCGCGGGCAAGGCCTCTGGGAGGAACTCCTGGTCTATCCTAAC 14843721
Query 48061 GGCTTCCCCCACAATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGC 48120
||| | | || | ||| || | |||||| ||||| | | |||||| |||
Sbjct 14843720 GGCATTGATAATTATTTCCTTCACTCTCTGCTCTGAAGGTTTATGGACCAGGTGTTTGA- 14843662
Query 48121 ATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGA 48180
| | || ||||||||||| ||| || || || || | ||| || ||| | |||||
Sbjct 14843661 --ACATCAGGCAGGCAAAGTTGTGGTGTAAACCCTCATCTCTGCTAATAAGCTCATTGGA 14843604
Query 48181 GAAGCA-GAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGC 48239
|| | ||| |||||||| | | | | ||||||||||| || | ||| |||| |
Sbjct 14843603 AAACCGCGAGGCCAGGCATCAGGCTGCATTTCTTGAGCCAGAATATCGACGCAGAAGAAC 14843544
Query 48240 CAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGT 48299
|| | ||| |||| || ||| || || || | || || ||| | | ||| |
Sbjct 14843543 CAAAAAAGGAGATTCCTTCCGTGGCAGCAAAGTCCACATCCCATTCCCCGTAGGTAGCCT 14843484
Query 48300 TCTTGTCTGAGATCC-AGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTC 48358
||||| | || | | ||| |||||||||||||||||| | || ||||| |||
Sbjct 14843483 CTTTGTCCCCAACCCAACGCAAG-GCCCAGTCTGCCTTCTTCCTTCCACAAGGCATTGTC 14843425
Query 48359 TCTATGGCCCGGAAGAG--CTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGA 48413
|| |||| |||||| |||| ||| | || || ||| || |||||
Sbjct 14843424 TCGATGGTGTTGAAGAGAAATTCT--GTCTCTTTGGAATCTTTAATATAAGTGTCAGTGA 14843367
Query 48414 GCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGG 48473
| || | |||||||||| || | || || || || || ||||| || |||||
Sbjct 14843366 GGAGACT---ACACATCTCAGAATGGATGTTTTCCATGGCAATTTGGAAGCCATAGAAAC 14843310
Query 48474 CCCTGGCCTCAAACACCTGCACTTCTGTGGAGA-ATCTCTCCAGCAGATTCTCATTGACT 48532
| ||| || || || |||||| ||| | | | ||||| || || ||||| |||
Sbjct 14843309 AGCAGGCTTCTGTCATCTCAACTTCT-TGGCCACACCGCTCCACCAAGTTTTCATTTACT 14843251
Query 48533 ATCCCATCTGAAGCAGCAAAGAAGGCAAG 48561
|| ||| | || |||||||| || ||
Sbjct 14843250 ATGCCAACACTCGCCGCAAAGAAAGCCAG 14843222
>seq7870
Length=10551609
Score = 91.5 bits (100), Expect = 3e-13
Identities = 96/124 (77%), Gaps = 2/124 (2%)
Strand=Plus/Minus
Query 213528 GTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGG 213587
|| ||||| | || || |||||||||||||||||| ||| || ||||||||||| |||
Sbjct 10326683 GTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCCAGGTTCTGCTGG 10326624
Query 213588 TTTGACTTTGCGTTGGCA-GAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTG 213646
||| || || | || ||||| |||||||||||||| |||| || |||||| |||
Sbjct 10326623 -TTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGGGGTACCTGTCTCTGTCTG 10326565
Query 213647 GGAC 213650
|||
Sbjct 10326564 AGAC 10326561
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931441137172480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |