Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq7872 172 1e-37 seq7767 141 2e-28 seq7763 141 2e-28 seq7820 105 1e-17 seq7870 91.5 3e-13 >seq7872 Length=10206820 Score = 172 bits (190), Expect = 1e-37 Identities = 184/243 (76%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 241385 AGCTGCTGACAGCCTTGGCACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGG 241444 ||| |||| ||||| | || | ||| || ||||| ||||||||| ||||||||||| Sbjct 1404666 AGCAGCTGGCAGCCGTTGCTGACGTGGGTCATGACCTTCTGTTTGAGCTGGGCCACCTGC 1404725 Query 241445 TCCCGCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACT 241504 ||||| || | || || | ||||| || ||||| || | |||||| |||||| Sbjct 1404726 TCCCGGAGGAGCCCAGCAGTGCTCGACAGCCCCGCGTTCTCGGCCTTGAGTGTCTTCACC 1404785 Query 241505 TTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAG 241564 || |||||||| ||||||||||| ||||| || ||| ||||| |||||||| |||| Sbjct 1404786 TTGTCCTCCAGGCGCGCGATGCGCTCCAGCTTCCGCTTCCGGCACTTGGTGGCCGCCAGC 1404845 Query 241565 CGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGA 241624 |||||||| || | ||| || ||| | |||||||| |||||||| ||||| | ||| || Sbjct 1404846 CGGTTCCGCAGCCGCTTGCGCTCCACTTTGATGCGCTCCTGGTCTTCCATATTGATGGGG 1404905 Query 241625 GAC 241627 ||| Sbjct 1404906 GAC 1404908 >seq7767 Length=50048226 Score = 141 bits (156), Expect = 2e-28 Identities = 376/570 (66%), Gaps = 11/570 (2%) Strand=Plus/Minus Query 48002 TTCATGCCTATGAGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACG 48061 ||||| || ||||| || |||||| | || ||||| ||| ||| ||||||| | ||| Sbjct 16036585 TTCATCCCAATGAGCTTCAGGGGCAAGGTCTCCGTGAGGAACCCCTGCTCTATCCGAACG 16036526 Query 48062 GCTTCCCCCACAATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCA 48121 || | | || | ||| || | || || ||||||| | |||||| ||| Sbjct 16036525 GCATTAATAATTATTTCCTTCACTCTCTGCTTGGAAGGTTTGTGGACCAGGTGTTTGA-- 16036468 Query 48122 TAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAG 48181 | | || |||||||||||| | ||| || || || || | ||| || || | ||||| Sbjct 16036467 -ACATCAGGCAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAA 16036409 Query 48182 AAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCA 48241 || | | |||||||| | | | | ||||||||||| || | ||| ||||| ||| Sbjct 16036408 AACATGGGGCCAGGCATCAGGTCACGTTTCTTGAGCCAGAATATCGTCGCAAAAGAACCA 16036349 Query 48242 GAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTC 48301 || |||||||| || ||||| || || || | | || || ||| | | ||| | Sbjct 16036348 GAAAAGAAGATTCCTTCCACAGCAGCAAAGTCCACAACCCGTTCCCCGTAGGTAGCCTCT 16036289 Query 48302 TTGT-CTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTC 48360 |||| | || | | | ||| |||||||||||||||||||| | || ||||| ||||| Sbjct 16036288 TTGTCCCCAGTCCAATGCAAG-GCCCAGTCTGCCTTCTTCTTTACACAAGGCATTGTCTC 16036230 Query 48361 TATGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAG 48417 | ||| |||||| | | || | || |||||| || | |||| || Sbjct 16036229 GAGGGCGTTGAAGAGAAATTCCCTTTCTTTGGAATCTTTAACATAAGTGTCAATGAGGAG 16036170 Query 48418 CTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCT 48477 | |||||||||||| || | || || || || || |||| || ||||| | Sbjct 16036169 ACT---GTACATCTCAGAATGGATGTTTTCCATGGCAATTCGGAAGCCATAGAAACAGCG 16036113 Query 48478 GGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCC 48537 ||| || | ||| |||||| | || | ||||| || || ||||| ||||| || Sbjct 16036112 GGCTTCTGTAATCTGAACTTCTTGGCTAAACCGCTCCACCAAGTTTTCATTTACTATGCC 16036053 Query 48538 ATCTGAAGCAGCAAAGAAGGCAAGGACATG 48567 ||| | |||||||| || || || || Sbjct 16036052 ATCACTCGGCGCAAAGAAAGCCAGAACGTG 16036023 >seq7763 Length=5490626 Score = 141 bits (156), Expect = 2e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 241415 AGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGT 241474 ||||||| ||| ||||| || |||||||| || ||||| | | ||| || | ||| Sbjct 2487453 AGGACCTTCTGCTTGAGCTGCGCCACCTGCTCGCGCAGCAGGCTCGCTGTGGACGCCAGC 2487394 Query 241475 CCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGT 241534 | | ||| | ||||||| ||||||||||||||| || |||| |||||| ||||| Sbjct 2487393 TCCGTGTTCTGGCTCTTGAGCGTCTTCACTTTCTCCTCGAGGCGCGAGATGCGCTCCAGC 2487334 Query 241535 TTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTG 241594 |||||| |||||| || | ||| || | |||||| || || | ||| || |||||||| Sbjct 2487333 TTGCGCTTGCGGCACTTAGAGGCAGCGATGCGGTTGCGCAGCCGCTTGCGCTCCGCCTTA 2487274 Query 241595 ATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 ||||| ||||| ||||||||||| || ||| Sbjct 2487273 ATGCGCTCCTGCGTGTCCATGTCGATGGGCGAC 2487241 >seq7820 Length=31847680 Score = 105 bits (116), Expect = 1e-17 Identities = 371/569 (65%), Gaps = 18/569 (3%) Strand=Plus/Minus Query 48001 GTTCATGCCTATGAGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCAC 48060 |||||| || ||||| | ||||||| |||| || ||| ||||||| |||||| || Sbjct 14843780 GTTCATCCCAATGAGCTTCGCGGGCAAGGCCTCTGGGAGGAACTCCTGGTCTATCCTAAC 14843721 Query 48061 GGCTTCCCCCACAATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGC 48120 ||| | | || | ||| || | |||||| ||||| | | |||||| ||| Sbjct 14843720 GGCATTGATAATTATTTCCTTCACTCTCTGCTCTGAAGGTTTATGGACCAGGTGTTTGA- 14843662 Query 48121 ATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGA 48180 | | || ||||||||||| ||| || || || || | ||| || ||| | ||||| Sbjct 14843661 --ACATCAGGCAGGCAAAGTTGTGGTGTAAACCCTCATCTCTGCTAATAAGCTCATTGGA 14843604 Query 48181 GAAGCA-GAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGC 48239 || | ||| |||||||| | | | | ||||||||||| || | ||| |||| | Sbjct 14843603 AAACCGCGAGGCCAGGCATCAGGCTGCATTTCTTGAGCCAGAATATCGACGCAGAAGAAC 14843544 Query 48240 CAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGT 48299 || | ||| |||| || ||| || || || | || || ||| | | ||| | Sbjct 14843543 CAAAAAAGGAGATTCCTTCCGTGGCAGCAAAGTCCACATCCCATTCCCCGTAGGTAGCCT 14843484 Query 48300 TCTTGTCTGAGATCC-AGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTC 48358 ||||| | || | | ||| |||||||||||||||||| | || ||||| ||| Sbjct 14843483 CTTTGTCCCCAACCCAACGCAAG-GCCCAGTCTGCCTTCTTCCTTCCACAAGGCATTGTC 14843425 Query 48359 TCTATGGCCCGGAAGAG--CTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGA 48413 || |||| |||||| |||| ||| | || || ||| || ||||| Sbjct 14843424 TCGATGGTGTTGAAGAGAAATTCT--GTCTCTTTGGAATCTTTAATATAAGTGTCAGTGA 14843367 Query 48414 GCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGG 48473 | || | |||||||||| || | || || || || || ||||| || ||||| Sbjct 14843366 GGAGACT---ACACATCTCAGAATGGATGTTTTCCATGGCAATTTGGAAGCCATAGAAAC 14843310 Query 48474 CCCTGGCCTCAAACACCTGCACTTCTGTGGAGA-ATCTCTCCAGCAGATTCTCATTGACT 48532 | ||| || || || |||||| ||| | | | ||||| || || ||||| ||| Sbjct 14843309 AGCAGGCTTCTGTCATCTCAACTTCT-TGGCCACACCGCTCCACCAAGTTTTCATTTACT 14843251 Query 48533 ATCCCATCTGAAGCAGCAAAGAAGGCAAG 48561 || ||| | || |||||||| || || Sbjct 14843250 ATGCCAACACTCGCCGCAAAGAAAGCCAG 14843222 >seq7870 Length=10551609 Score = 91.5 bits (100), Expect = 3e-13 Identities = 96/124 (77%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 213528 GTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGG 213587 || ||||| | || || |||||||||||||||||| ||| || ||||||||||| ||| Sbjct 10326683 GTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCCAGGTTCTGCTGG 10326624 Query 213588 TTTGACTTTGCGTTGGCA-GAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTG 213646 ||| || || | || ||||| |||||||||||||| |||| || |||||| ||| Sbjct 10326623 -TTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGGGGTACCTGTCTCTGTCTG 10326565 Query 213647 GGAC 213650 ||| Sbjct 10326564 AGAC 10326561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931441137172480