Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq7767 131 3e-25
seq7786 84.2 4e-11
>seq7767
Length=50048226
Score = 131 bits (144), Expect = 3e-25
Identities = 402/608 (66%), Gaps = 24/608 (4%)
Strand=Plus/Plus
Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533
||||| ||| ||||||| |||| ||| | || ||||| || |||||| | |||
Sbjct 16035903 GATATTTGGCAGATGTATGAGAAAGCTGAGGCTTCCTTTTGGACAGCTGAAGAGGTGGAT 16035962
Query 25534 CTGGCCAAGGACATGGA-CGGCTGGTA-CGCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591
|| |||||||||| | | | || | | || | || || ||| | || | ||
Sbjct 16035963 CTTTCCAAGGACATTCAGCACCAGGAATCCCTGAAGCCTGAGGAGAGATACTTTCTATCC 16036022
Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651
|||| |||| |||||||| | |||||| ||||| || || || || |||
Sbjct 16036023 C--ACGTTCTGGCTTTCTTTGCGCCGAGTGATGGCATAGTAAATGAAAACTTGGTGGAGC 16036080
Query 25652 GATTCACCAGGGAAGTGCAG--TACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGC 25709
| || | | ||||| ||| ||| || ||| |||||||| || |||| || ||
Sbjct 16036081 GGTTTAGCCAAGAAGTTCAGATTACA--GAAGCCCGCTGTTTCTATGGCTTCCGAATTGC 16036138
Query 25710 CATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGA 25766
||| ||||| | || |||||| |||| || || || || || || ||| |||
Sbjct 16036139 CATGGAAAACATCCATTCTGAGATGTA---CAGTCTCCTCATTGACACTTATGTTAAAGA 16036195
Query 25767 CGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAA 25826
| || || || || || ||| ||||| || || | | |||| |||
Sbjct 16036196 TTCCAAAGAAAGGGAATTTCTCTTCAACGCCCTCGAGACAATGCCTTGTGTAAAGAAGAA 16036255
Query 25827 GGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCG-CTACGTTTGGCGAGCGGCTGG 25885
||| |||||| || | |||| | | || || | |||| | || || ||| | |
Sbjct 16036256 GGCAGACTGGGCCTTGCATTGGA-CTGGGGACAAAGAGGCTACCTACGGGGAACGGGTTG 16036314
Query 25886 TAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGC 25945
| | ||||||||||||||| || ||||| || ||||| |||||| | || |||||||
Sbjct 16036315 TGGACTTTGCTGCTGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCGACGATATTCTGGC 16036374
Query 25946 TCAAGCAGAAGGGGACC--ATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGA 26003
||||| || | |||| ||||| || | |||||||| || || || ||||| ||
Sbjct 16036375 TCAAG--AAACGTGACCTGATGCCTGGCCCCATGTTTTCCAATGAACTTATTAGCAGAGA 16036432
Query 26004 CGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACC 26063
|||||| | ||| | || |||||||||||| | | || ||| || ||||||||||
Sbjct 16036433 TGAGGGTTTACACTGTGACTTTGCCTGCCTGATGTTCA---AACACCTGGTCCACAAACC 16036489
Query 26064 TTCTCAAG 26071
||| ||||
Sbjct 16036490 TTC-CAAG 16036496
>seq7786
Length=83011774
Score = 84.2 bits (92), Expect = 4e-11
Identities = 95/125 (76%), Gaps = 2/125 (2%)
Strand=Plus/Minus
Query 25883 TGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCT 25942
|||| || ||||||||||| || || || || ||| || || ||||| || || ||||
Sbjct 48121275 TGGTGGCTTTTGCTGCTGTAGAAGGGATTTTCTTCTCGGGATCTTTTGCTGCTATATTCT 48121216
Query 25943 GGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGG 26001
|||| ||| | ||| || | ||||||||| || |||||||| || |||||||||||
Sbjct 48121215 GGCTAAAGAA-AAGAGGTCTCATGCCCGGACTCACGTTTTCCAATGAACTCATCAGCAGA 48121157
Query 26002 GACGA 26006
|| ||
Sbjct 48121156 GATGA 48121152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928753401671680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |