Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq7767 131 3e-25 seq7786 84.2 4e-11 >seq7767 Length=50048226 Score = 131 bits (144), Expect = 3e-25 Identities = 402/608 (66%), Gaps = 24/608 (4%) Strand=Plus/Plus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 ||||| ||| ||||||| |||| ||| | || ||||| || |||||| | ||| Sbjct 16035903 GATATTTGGCAGATGTATGAGAAAGCTGAGGCTTCCTTTTGGACAGCTGAAGAGGTGGAT 16035962 Query 25534 CTGGCCAAGGACATGGA-CGGCTGGTA-CGCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591 || |||||||||| | | | || | | || | || || ||| | || | || Sbjct 16035963 CTTTCCAAGGACATTCAGCACCAGGAATCCCTGAAGCCTGAGGAGAGATACTTTCTATCC 16036022 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 |||| |||| |||||||| | |||||| ||||| || || || || ||| Sbjct 16036023 C--ACGTTCTGGCTTTCTTTGCGCCGAGTGATGGCATAGTAAATGAAAACTTGGTGGAGC 16036080 Query 25652 GATTCACCAGGGAAGTGCAG--TACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGC 25709 | || | | ||||| ||| ||| || ||| |||||||| || |||| || || Sbjct 16036081 GGTTTAGCCAAGAAGTTCAGATTACA--GAAGCCCGCTGTTTCTATGGCTTCCGAATTGC 16036138 Query 25710 CATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGA 25766 ||| ||||| | || |||||| |||| || || || || || || ||| ||| Sbjct 16036139 CATGGAAAACATCCATTCTGAGATGTA---CAGTCTCCTCATTGACACTTATGTTAAAGA 16036195 Query 25767 CGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAA 25826 | || || || || || ||| ||||| || || | | |||| ||| Sbjct 16036196 TTCCAAAGAAAGGGAATTTCTCTTCAACGCCCTCGAGACAATGCCTTGTGTAAAGAAGAA 16036255 Query 25827 GGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCG-CTACGTTTGGCGAGCGGCTGG 25885 ||| |||||| || | |||| | | || || | |||| | || || ||| | | Sbjct 16036256 GGCAGACTGGGCCTTGCATTGGA-CTGGGGACAAAGAGGCTACCTACGGGGAACGGGTTG 16036314 Query 25886 TAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGC 25945 | | ||||||||||||||| || ||||| || ||||| |||||| | || ||||||| Sbjct 16036315 TGGACTTTGCTGCTGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCGACGATATTCTGGC 16036374 Query 25946 TCAAGCAGAAGGGGACC--ATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGA 26003 ||||| || | |||| ||||| || | |||||||| || || || ||||| || Sbjct 16036375 TCAAG--AAACGTGACCTGATGCCTGGCCCCATGTTTTCCAATGAACTTATTAGCAGAGA 16036432 Query 26004 CGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACC 26063 |||||| | ||| | || |||||||||||| | | || ||| || |||||||||| Sbjct 16036433 TGAGGGTTTACACTGTGACTTTGCCTGCCTGATGTTCA---AACACCTGGTCCACAAACC 16036489 Query 26064 TTCTCAAG 26071 ||| |||| Sbjct 16036490 TTC-CAAG 16036496 >seq7786 Length=83011774 Score = 84.2 bits (92), Expect = 4e-11 Identities = 95/125 (76%), Gaps = 2/125 (2%) Strand=Plus/Minus Query 25883 TGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCT 25942 |||| || ||||||||||| || || || || ||| || || ||||| || || |||| Sbjct 48121275 TGGTGGCTTTTGCTGCTGTAGAAGGGATTTTCTTCTCGGGATCTTTTGCTGCTATATTCT 48121216 Query 25943 GGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGG 26001 |||| ||| | ||| || | ||||||||| || |||||||| || ||||||||||| Sbjct 48121215 GGCTAAAGAA-AAGAGGTCTCATGCCCGGACTCACGTTTTCCAATGAACTCATCAGCAGA 48121157 Query 26002 GACGA 26006 || || Sbjct 48121156 GATGA 48121152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928753401671680