Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq7788 325 5e-84 seq7816 181 1e-40 seq7818 107 2e-18 >seq7788 Length=6094078 Score = 325 bits (360), Expect = 5e-84 Identities = 667/985 (68%), Gaps = 11/985 (1%) Strand=Plus/Minus Query 160052 CAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTATTTGC 160111 |||||| || |||| ||| |||| ||| || | ||||| |||| ||| || || || || Sbjct 1359106 CAGATGCTCATCCAAACACTGGATGGCAAAGAGGTCAATGTCTGTGTCAAACTTGTTGGC 1359047 Query 160112 GAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACGCAGAC 160171 |||| ||||| || |||| ||||||| || ||| || | ||||||||||| || Sbjct 1359046 AAACAAGTGGTGC---TTGCGTAGCATCCAGTTCAAGTCCCCTGCTCCGAACACGCACAC 1358990 Query 160172 GGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCACCTTC 160231 ||||| | || || || |||| || || || | || || || | || || ||||| Sbjct 1358989 AGAACGCACATGGACCCCACTGCAGGGTGGATAGGGGGCACCCTTGGAAACATCCCCTTC 1358930 Query 160232 GTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTATTTGTA 160291 | | |||||||| || |||||||| || || || |||||||| || |||| || || | Sbjct 1358929 GAAATACTGCCATTTGACAAACCTTGCAATTGCATGCATGTCAGACATGTCATACTTCTG 1358870 Query 160292 CATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGGTGTTC 160351 | | || | | || || || | || || | ||| | |||||||| || | || Sbjct 1358869 GCTTAAGGACAGTGAGCCTGGGACATCAGGGATCCTCTGAATAGTGGCCCAGAGATACTC 1358810 Query 160352 GTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTGTCCCGCAG 160411 || |||||||| || || |||| ||| ||||| |||| | |||| | | || Sbjct 1358809 ATCCGGGCTGTATGTATCTTTAGCCCACTCCATAAACTTTTGGATTTTTTCATTCTCTAG 1358750 Query 160412 AACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATATCGGTAT 160471 || | ||||| || | || ||||| || || ||||| || || | ||| | Sbjct 1358749 CACATACCCCACGTACATCCTACTGACCACAAAATAGGCACTGCCTGAAAACAGAGGTGT 1358690 Query 160472 GGGTATAGGCGGCGTGTCTTT-GTCCTGACCGGTGTTAGACACCACTCCTTTCACCAGCG 160530 | ||| || ||| ||| ||| || ||||| | || | || || || | | Sbjct 1358689 TTCGAGAGGAGG-GTGCATTTTGTCAGTCCCCGTGTTCGTCAGCTTCCCATTAACAACTG 1358631 Query 160531 CGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCTAGACTGT 160590 | |||| |||||||| | | || | | |||||| | || || ||||| ||| Sbjct 1358630 TATAATGCTTTTTCCACCTTTCTTTTTTATTGGATGGCATTCTCTCAGTTTCTAGGTTGT 1358571 Query 160591 TGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGCGGAAAGT 160650 | |||| ||||| || |||| | ||| || || ||||| || || | ||||| | Sbjct 1358570 TTTCACCCATTAGCGACTTGAGCTTCCGGACAATTTCCAGGTTGGTTTTAATGGGAAAAT 1358511 Query 160651 CGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGGTCCCTCA 160710 | ||||||| | ||||||| ||||||||| | || |||| || ||||| || Sbjct 1358510 CCATACCGCAAAGATTTATCAAGTACTTCCAATCTGCACTCATCCTGTAGAGGTCTTGCA 1358451 Query 160711 TGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCTAGTTTAC 160770 |||| || | || ||||| || || ||||| || || ||||| || |||| || | || Sbjct 1358450 TGCAGTTGAGGTCAGCCTGAACCCGACTCCATGAGGCATACACCACACTCTCCAGCTGAC 1358391 Query 160771 TGGCCACAAAGACGTTATCGAAACACGACACGATTCC---CACCACCGCCAGAAAGAACA 160827 ||||||||||||| ||| ||| || ||| |||| || |||| | |||| |||| | | Sbjct 1358390 TGGCCACAAAGACATTACTGAAGCAGGACGCGATGCCAATCACCGCGGCCAAAAAGGA-A 1358332 Query 160828 TCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGATGGCCC 160887 || || | ||||| ||||||||| | ||| || | ||||||||| |||||||| | Sbjct 1358331 TC--CTCTGACTTTCTGTCCACGTGAATGCAGTAGAAATTCTGAGGCATATAGATGGCTC 1358274 Query 160888 TGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTATCGGAA 160947 | || | ||| || | ||| || || || ||||| | ||| | ||| || ||||| |||| Sbjct 1358273 TCAGGAGCCTGTCAAGCATTTCAATTTTGTGATGAACCACTAGAGAATATGCTATGGGAA 1358214 Query 160948 ACTCGGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACTTTCGCGTCTTGATAAAATAAT 161007 |||| ||| || ||| |||| | | || || || ||||||| ||| ||| Sbjct 1358213 ACTCTTCCTCTTCTTTACTAAGGGGTTGCATGATATATTTCTGCCTCTTGATGAAAGAAT 1358154 Query 161008 CACAATCCCGCGTCATGTTGATATA 161032 |||||| | |||||||| ||||| Sbjct 1358153 TACAATCTCTGGTCATGTTTATATA 1358129 >seq7816 Length=41823926 Score = 181 bits (200), Expect = 1e-40 Identities = 228/312 (73%), Gaps = 6/312 (2%) Strand=Plus/Plus Query 168161 GCACGTTTTTCCAGAAATCTTGCCTGATCCGAACGTGTTGAAGAGGCACATGAAGCAGCC 168220 ||| ||| |||| || ||||| || || || || || |||||||||||| || | || || Sbjct 30774242 GCAGGTTGTTCCTGAGATCTTCCCAGAACCAAAAGTATTGAAGAGGCACTTGTAACACCC 30774301 Query 168221 TTCGTCCTCCACGGTGGTATTCCAAAATGTTAGCGTTGAGTTTCGGAGGCCCAACTGCGT 168280 ||| ||||||| |||||| ||||| || || | |||||||| ||| ||| ||| || Sbjct 30774302 TTCATCCTCCAGGGTGGTGTTCCAGAAGGTAATGGTTGAGTTCTTGAGTTCCAGCTGGGT 30774361 Query 168281 TATGTTCACACGATCTTTATAAGGAGGTTGAACTACAACGCCGTGGTTCTCGCTGAAGGT 168340 ||||| | |||||||| | ||| || || ||||| || ||||||| ||||||||| Sbjct 30774362 GATGTTTATCTTGTCTTTATAGGCAGGCTGGACCACAACCCCATGGTTCTTGCTGAAGGT 30774421 Query 168341 GGCCATGTTCTCCGGGCTGGTGGCCTTTATCTTCTGCCAGGTTACTATCAGAACCTCTTT 168400 | ||||||| || ||||| ||||| || |||||||| || || |||| | ||| Sbjct 30774422 GACCATGTTTTCTGGGCTAACAGCCTTGATTTTCTGCCATGTCACAATCAAGA---CTTC 30774478 Query 168401 ATCGG---TCTGCAGGGAACATCTCAGCGAAGCCGGAGTGTTCAGCAGTTCTCGCTCATC 168457 |||| | ||||| || ||||| | ||||| || ||||||||| | | | |||| Sbjct 30774479 CTCGGAATTTTGCAGAGAGCATCTTAAGGAAGCAGGTGTGTTCAGCGGCTTTTTTTCATT 30774538 Query 168458 TTGAGTTACGAC 168469 ||| || | ||| Sbjct 30774539 TTGGGTCATGAC 30774550 Score = 93.3 bits (102), Expect = 5e-14 Identities = 144/205 (70%), Gaps = 3/205 (1%) Strand=Plus/Plus Query 167898 GTTACAGTTCCCAAATGTAGTACCTTGCATATCACCTCTCCGTTTCCTACTTGACTCTTT 167957 || ||| | |||| || || |||| ||| | |||||| || || ||||||| ||| Sbjct 30771664 GTCACATTCCCCAGGTGCAGCACCTGGCAGACCACCTCC---TTCCCCACTTGACGCTTG 30771720 Query 167958 GGATCTTTTACTTGTAAAATGCTAGTTACACTTGTAGTTCCATTGCGATGTAAAACGGTT 168017 || ||||| | || | || ||| || ||| || || |||||| | || || | Sbjct 30771721 GGGTCTTTGATCTGGAGAACGCTCGTGACAGACGTGGTCCCATTGGGGTGAAAGAGAACC 30771780 Query 168018 TTCGTGCTGTTCTCAATCCCTGATCCTGCCACCTTCCAGAATATTACAGGAGCGGGTCGT 168077 | || ||||| ||||||||||| || | ||||||||| | || ||||| || || || Sbjct 30771781 TCAGTACTGTTTTCAATCCCTGACCCAGATACCTTCCAGGAGATCACAGGGGCTGGGCGG 30771840 Query 168078 GCTGTAGCAGAGCAGGTAATATTTA 168102 || | |||||||| || ||||||| Sbjct 30771841 GCATTGGCAGAGCAAGTGATATTTA 30771865 >seq7818 Length=84771923 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 176232 AGATATTTTACTAGGTCACGTGGCGAGTCATAATCATTAACATGTATAAATGCGTGTGGT 176291 ||||| || |||| |||| || |||| |||||| | ||||| || |||| | || | Sbjct 63725501 AGATACTTGGCTAGCTCACTGGGAGAGTTATAATCTTCCACATGAATGAATGAATCTGCT 63725560 Query 176292 GGAATGTAGTTTTCATAATTTTGTCTGGAGGGTCCTAAAACTATTGGTACGGTACGTGCT 176351 ||||| || || |||||||||| || || || || | ||| | ||||| | | ||| Sbjct 63725561 GGAATATAATTCTCATAATTTTCCCTAGATGGCCCCAGAACAACGGGTACAGAGCCAGCT 63725620 Query 176352 AATAATGAGCGGTAGATCTTTTCTGAGATGTAGTCAGTGTGAATTGAGTTTTCAAAAGCT 176411 | || | ||||| |||||||| |||||| || |||| |||||||||||||||| Sbjct 63725621 AGAAAAGCATTGTAGAGCTTTTCTGTGATGTAATCTTTGTGGATTGAGTTTTCAAAAGAA 63725680 Query 176412 AAATAGAACTTACA 176425 | ||| || || || Sbjct 63725681 AGATAAAATTTGCA 63725694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577162401630720