Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_020474.2
Length=180421
Score E
Sequences producing significant alignments: (Bits) Value
seq7788 325 5e-84
seq7816 181 1e-40
seq7818 107 2e-18
>seq7788
Length=6094078
Score = 325 bits (360), Expect = 5e-84
Identities = 667/985 (68%), Gaps = 11/985 (1%)
Strand=Plus/Minus
Query 160052 CAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTATTTGC 160111
|||||| || |||| ||| |||| ||| || | ||||| |||| ||| || || || ||
Sbjct 1359106 CAGATGCTCATCCAAACACTGGATGGCAAAGAGGTCAATGTCTGTGTCAAACTTGTTGGC 1359047
Query 160112 GAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACGCAGAC 160171
|||| ||||| || |||| ||||||| || ||| || | ||||||||||| ||
Sbjct 1359046 AAACAAGTGGTGC---TTGCGTAGCATCCAGTTCAAGTCCCCTGCTCCGAACACGCACAC 1358990
Query 160172 GGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCACCTTC 160231
||||| | || || || |||| || || || | || || || | || || |||||
Sbjct 1358989 AGAACGCACATGGACCCCACTGCAGGGTGGATAGGGGGCACCCTTGGAAACATCCCCTTC 1358930
Query 160232 GTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTATTTGTA 160291
| | |||||||| || |||||||| || || || |||||||| || |||| || || |
Sbjct 1358929 GAAATACTGCCATTTGACAAACCTTGCAATTGCATGCATGTCAGACATGTCATACTTCTG 1358870
Query 160292 CATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGGTGTTC 160351
| | || | | || || || | || || | ||| | |||||||| || | ||
Sbjct 1358869 GCTTAAGGACAGTGAGCCTGGGACATCAGGGATCCTCTGAATAGTGGCCCAGAGATACTC 1358810
Query 160352 GTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTGTCCCGCAG 160411
|| |||||||| || || |||| ||| ||||| |||| | |||| | | ||
Sbjct 1358809 ATCCGGGCTGTATGTATCTTTAGCCCACTCCATAAACTTTTGGATTTTTTCATTCTCTAG 1358750
Query 160412 AACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATATCGGTAT 160471
|| | ||||| || | || ||||| || || ||||| || || | ||| |
Sbjct 1358749 CACATACCCCACGTACATCCTACTGACCACAAAATAGGCACTGCCTGAAAACAGAGGTGT 1358690
Query 160472 GGGTATAGGCGGCGTGTCTTT-GTCCTGACCGGTGTTAGACACCACTCCTTTCACCAGCG 160530
| ||| || ||| ||| ||| || ||||| | || | || || || | |
Sbjct 1358689 TTCGAGAGGAGG-GTGCATTTTGTCAGTCCCCGTGTTCGTCAGCTTCCCATTAACAACTG 1358631
Query 160531 CGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCTAGACTGT 160590
| |||| |||||||| | | || | | |||||| | || || ||||| |||
Sbjct 1358630 TATAATGCTTTTTCCACCTTTCTTTTTTATTGGATGGCATTCTCTCAGTTTCTAGGTTGT 1358571
Query 160591 TGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGCGGAAAGT 160650
| |||| ||||| || |||| | ||| || || ||||| || || | ||||| |
Sbjct 1358570 TTTCACCCATTAGCGACTTGAGCTTCCGGACAATTTCCAGGTTGGTTTTAATGGGAAAAT 1358511
Query 160651 CGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGGTCCCTCA 160710
| ||||||| | ||||||| ||||||||| | || |||| || ||||| ||
Sbjct 1358510 CCATACCGCAAAGATTTATCAAGTACTTCCAATCTGCACTCATCCTGTAGAGGTCTTGCA 1358451
Query 160711 TGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCTAGTTTAC 160770
|||| || | || ||||| || || ||||| || || ||||| || |||| || | ||
Sbjct 1358450 TGCAGTTGAGGTCAGCCTGAACCCGACTCCATGAGGCATACACCACACTCTCCAGCTGAC 1358391
Query 160771 TGGCCACAAAGACGTTATCGAAACACGACACGATTCC---CACCACCGCCAGAAAGAACA 160827
||||||||||||| ||| ||| || ||| |||| || |||| | |||| |||| | |
Sbjct 1358390 TGGCCACAAAGACATTACTGAAGCAGGACGCGATGCCAATCACCGCGGCCAAAAAGGA-A 1358332
Query 160828 TCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGATGGCCC 160887
|| || | ||||| ||||||||| | ||| || | ||||||||| |||||||| |
Sbjct 1358331 TC--CTCTGACTTTCTGTCCACGTGAATGCAGTAGAAATTCTGAGGCATATAGATGGCTC 1358274
Query 160888 TGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTATCGGAA 160947
| || | ||| || | ||| || || || ||||| | ||| | ||| || ||||| ||||
Sbjct 1358273 TCAGGAGCCTGTCAAGCATTTCAATTTTGTGATGAACCACTAGAGAATATGCTATGGGAA 1358214
Query 160948 ACTCGGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACTTTCGCGTCTTGATAAAATAAT 161007
|||| ||| || ||| |||| | | || || || ||||||| ||| |||
Sbjct 1358213 ACTCTTCCTCTTCTTTACTAAGGGGTTGCATGATATATTTCTGCCTCTTGATGAAAGAAT 1358154
Query 161008 CACAATCCCGCGTCATGTTGATATA 161032
|||||| | |||||||| |||||
Sbjct 1358153 TACAATCTCTGGTCATGTTTATATA 1358129
>seq7816
Length=41823926
Score = 181 bits (200), Expect = 1e-40
Identities = 228/312 (73%), Gaps = 6/312 (2%)
Strand=Plus/Plus
Query 168161 GCACGTTTTTCCAGAAATCTTGCCTGATCCGAACGTGTTGAAGAGGCACATGAAGCAGCC 168220
||| ||| |||| || ||||| || || || || || |||||||||||| || | || ||
Sbjct 30774242 GCAGGTTGTTCCTGAGATCTTCCCAGAACCAAAAGTATTGAAGAGGCACTTGTAACACCC 30774301
Query 168221 TTCGTCCTCCACGGTGGTATTCCAAAATGTTAGCGTTGAGTTTCGGAGGCCCAACTGCGT 168280
||| ||||||| |||||| ||||| || || | |||||||| ||| ||| ||| ||
Sbjct 30774302 TTCATCCTCCAGGGTGGTGTTCCAGAAGGTAATGGTTGAGTTCTTGAGTTCCAGCTGGGT 30774361
Query 168281 TATGTTCACACGATCTTTATAAGGAGGTTGAACTACAACGCCGTGGTTCTCGCTGAAGGT 168340
||||| | |||||||| | ||| || || ||||| || ||||||| |||||||||
Sbjct 30774362 GATGTTTATCTTGTCTTTATAGGCAGGCTGGACCACAACCCCATGGTTCTTGCTGAAGGT 30774421
Query 168341 GGCCATGTTCTCCGGGCTGGTGGCCTTTATCTTCTGCCAGGTTACTATCAGAACCTCTTT 168400
| ||||||| || ||||| ||||| || |||||||| || || |||| | |||
Sbjct 30774422 GACCATGTTTTCTGGGCTAACAGCCTTGATTTTCTGCCATGTCACAATCAAGA---CTTC 30774478
Query 168401 ATCGG---TCTGCAGGGAACATCTCAGCGAAGCCGGAGTGTTCAGCAGTTCTCGCTCATC 168457
|||| | ||||| || ||||| | ||||| || ||||||||| | | | ||||
Sbjct 30774479 CTCGGAATTTTGCAGAGAGCATCTTAAGGAAGCAGGTGTGTTCAGCGGCTTTTTTTCATT 30774538
Query 168458 TTGAGTTACGAC 168469
||| || | |||
Sbjct 30774539 TTGGGTCATGAC 30774550
Score = 93.3 bits (102), Expect = 5e-14
Identities = 144/205 (70%), Gaps = 3/205 (1%)
Strand=Plus/Plus
Query 167898 GTTACAGTTCCCAAATGTAGTACCTTGCATATCACCTCTCCGTTTCCTACTTGACTCTTT 167957
|| ||| | |||| || || |||| ||| | |||||| || || ||||||| |||
Sbjct 30771664 GTCACATTCCCCAGGTGCAGCACCTGGCAGACCACCTCC---TTCCCCACTTGACGCTTG 30771720
Query 167958 GGATCTTTTACTTGTAAAATGCTAGTTACACTTGTAGTTCCATTGCGATGTAAAACGGTT 168017
|| ||||| | || | || ||| || ||| || || |||||| | || || |
Sbjct 30771721 GGGTCTTTGATCTGGAGAACGCTCGTGACAGACGTGGTCCCATTGGGGTGAAAGAGAACC 30771780
Query 168018 TTCGTGCTGTTCTCAATCCCTGATCCTGCCACCTTCCAGAATATTACAGGAGCGGGTCGT 168077
| || ||||| ||||||||||| || | ||||||||| | || ||||| || || ||
Sbjct 30771781 TCAGTACTGTTTTCAATCCCTGACCCAGATACCTTCCAGGAGATCACAGGGGCTGGGCGG 30771840
Query 168078 GCTGTAGCAGAGCAGGTAATATTTA 168102
|| | |||||||| || |||||||
Sbjct 30771841 GCATTGGCAGAGCAAGTGATATTTA 30771865
>seq7818
Length=84771923
Score = 107 bits (118), Expect = 2e-18
Identities = 140/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 176232 AGATATTTTACTAGGTCACGTGGCGAGTCATAATCATTAACATGTATAAATGCGTGTGGT 176291
||||| || |||| |||| || |||| |||||| | ||||| || |||| | || |
Sbjct 63725501 AGATACTTGGCTAGCTCACTGGGAGAGTTATAATCTTCCACATGAATGAATGAATCTGCT 63725560
Query 176292 GGAATGTAGTTTTCATAATTTTGTCTGGAGGGTCCTAAAACTATTGGTACGGTACGTGCT 176351
||||| || || |||||||||| || || || || | ||| | ||||| | | |||
Sbjct 63725561 GGAATATAATTCTCATAATTTTCCCTAGATGGCCCCAGAACAACGGGTACAGAGCCAGCT 63725620
Query 176352 AATAATGAGCGGTAGATCTTTTCTGAGATGTAGTCAGTGTGAATTGAGTTTTCAAAAGCT 176411
| || | ||||| |||||||| |||||| || |||| ||||||||||||||||
Sbjct 63725621 AGAAAAGCATTGTAGAGCTTTTCTGTGATGTAATCTTTGTGGATTGAGTTTTCAAAAGAA 63725680
Query 176412 AAATAGAACTTACA 176425
| ||| || || ||
Sbjct 63725681 AGATAAAATTTGCA 63725694
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 577162401630720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |