Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq7767 113 8e-20
seq7828 107 3e-18
seq7857 102 1e-16
seq7764 86.0 1e-11
>seq7767
Length=50048226
Score = 113 bits (124), Expect = 8e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211
|| ||||| | |||| ||| || ||| || ||||| || || || | ||| ||
Sbjct 33066748 ACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATCTTCC 33066807
Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271
| ||| || || ||||| || | |||||| ||||||||||| |||||||| ||||| ||
Sbjct 33066808 AGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGA 33066867
Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331
|| |||| |||| |||| || ||||| || | ||||| || || || || || ||
Sbjct 33066868 ATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGATCAACCTCGAGGGTGATGGTCTTC 33066927
Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
|| || || ||||| || || || ||||| ||
Sbjct 33066928 CCCGTAAGGGTTTTCACGAAAATCTGCATCTT 33066959
>seq7828
Length=21597463
Score = 107 bits (118), Expect = 3e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211
|| ||||| | || | ||| || ||| || ||||| || || | | ||| ||
Sbjct 14213378 ACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGGACGTCCATCTTCC 14213437
Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271
| ||| || || ||||| || | |||||| ||||||||||| |||||||| |||| ||
Sbjct 14213438 AGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATTCTGA 14213497
Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331
|| |||| ||||||||| || ||||| || | ||||| || ||||| || || ||
Sbjct 14213498 ATCTTGGCCTTTATATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGATGGTCTTC 14213557
Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
|| || || ||||| || || || ||||| ||
Sbjct 14213558 CCCGTAAGGGTTTTCACGAAAATCTGCATCTT 14213589
>seq7857
Length=43258702
Score = 102 bits (112), Expect = 1e-16
Identities = 118/159 (74%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264
||| || | ||| || || ||||| || |||||||| ||||||||||| |||||||| ||
Sbjct 24178110 ATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCAGGAGGAATTCCTTCCTT 24178051
Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324
||| || || |||| |||| |||| || ||||| || | ||| | || ||||| ||
Sbjct 24178050 ATCCTGAATCTTGGCCTTTACATTTTGTATTGTATCCGAGGGTTCAGCCTCGAGAGTGAT 24177991
Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
|| || || | || ||||| || || || ||||| ||
Sbjct 24177990 GGTCTTCCCCATAAGAGTTTTCACGAAAATCTGCATCTT 24177952
>seq7764
Length=47977530
Score = 86.0 bits (94), Expect = 1e-11
Identities = 95/127 (75%), Gaps = 0/127 (0%)
Strand=Plus/Plus
Query 193237 TCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAG 193296
|||| ||||||||||| |||||||| ||||| || || |||| |||| |||| | |
Sbjct 26988300 TCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTACTG 26988359
Query 193297 TATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTT 193356
|| | || || ||||| || ||||| || || || || | || ||||| ||||| || |
Sbjct 26988360 TACCTGAGGATTCAACCTCGAGAGTGATGGTCTTCCCCATAAGGGTTTTCACAAAAATCT 26988419
Query 193357 GCATTTT 193363
|||| ||
Sbjct 26988420 GCATCTT 26988426
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899565874007040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |