Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq7818 93.3 8e-14 >seq7818 Length=84771923 Score = 93.3 bits (102), Expect = 8e-14 Identities = 164/239 (69%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893 ||| || |||||| | ||||| || || | ||| | ||| | ||| || ||| || Sbjct 26785824 TTCTTAGCACCACCACCAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTG 26785765 Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953 || || |||| ||||| || ||| ||| || |||||||| || | |||||| || Sbjct 26785764 TAGATGGACAAAGTACGTTCATCTCCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGA 26785705 Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013 ||| || ||| |||| ||||| || || || ||| |||| | | ||| | || Sbjct 26785704 TCACAAGGAATTTCTTCCTTATCCTGAATCTTGACCTTTGCATTGTCTGTTGTAGCCGAG 26785645 Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 | ||| || || ||||| || || || || || | ||||| | ||| ||||||||||| Sbjct 26785644 GGTTCAACCTCAAGAGTGATAGTCTTCCCGGTAAGGGTTTTCACGAAAATCTGCATTTT 26785586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905046934617600