Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq7782 84.2 6e-11
seq7767 84.2 6e-11
>seq7782
Length=35566003
Score = 84.2 bits (92), Expect = 6e-11
Identities = 105/144 (73%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 448887 GCTACGCCCGAGGAAATCAAGAAGGCATATAAACGACTCGCAATTAAACATCATCCTGAT 448946
||| | || ||||| || || ||||| ||| | | ||| ||||| || ||||||
Sbjct 27279781 GCTTCACCTGAGGATATTAAAAAGGCTTATCGTAAAGTGGCACTTAAATGGCACCCTGAT 27279722
Query 448947 AAAAATCCAGATAATAAAGCAGAGGCAGAGGAGAAATTCAAAGAGATTTCTCAAGCTTAT 449006
||||||||||| ||||||| ||| || ||| ||||||||||| | || | || |||
Sbjct 27279721 AAAAATCCAGAAAATAAAGAAGAAGCTGAGAGAAAATTCAAAGAAGTAGCTGAGGCATAT 27279662
Query 449007 GAAATTGTAACAAATAAAGAAAAA 449030
|| | || ||||||| ||||||
Sbjct 27279661 GAGGTATTATCAAATAATGAAAAA 27279638
>seq7767
Length=50048226
Score = 84.2 bits (92), Expect = 6e-11
Identities = 268/403 (67%), Gaps = 22/403 (5%)
Strand=Plus/Plus
Query 133076 TTTGTTATGTTCCCAATTAAGGACGACGAGATTTGGCAGATGTATAAAAAACAGCAAGAT 133135
||||| || ||||| | | || | || ||||||||||||||| | ||| | | |
Sbjct 16035876 TTTGTCATCTTCCCTGTCGGGTACCATGATATTTGGCAGATGTATGAGAAAGCTGAGGCT 16035935
Query 133136 TTATTTTGGACTTCAACTGAA---GTAGATTTATCCAAAGAC--CCAGCCCACTGGGAAG 133190
| ||||||| || ||||| || ||| | ||||| ||| ||| ||| ||||
Sbjct 16035936 TCCTTTTGGA---CAGCTGAAGAGGTGGATCTTTCCAAGGACATTCAG--CACCAGGAAT 16035990
Query 133191 CCCTTA---CTGGGGATGAAAAACATTTTATTTCTATGATTTTAGCGTTTTTTGCTGCGA 133247
|||| | ||| ||| || | || || || | | | | || | || || ||||| |||
Sbjct 16035991 CCCTGAAGCCTGAGGA-GAGATACTTTCTA-TCCCACG-TTCTGGCTTTCTTTGCGCCGA 16036047
Query 133248 GTGATGGTATTGTTCTTGAAAATTTAGGAACACGGTTTATGGGAGAAGTTCAACTGGCCG 133307
||||||| || || |||||| || | ||||||| ||||||||| | | |
Sbjct 16036048 GTGATGGCATAGTAAATGAAAACTTGGTGGAGCGGTTTAGCCAAGAAGTTCAGATTACAG 16036107
Query 133308 AAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCA--CATA 133365
||||||| || ||||| | | ||||| |||||||| ||||||||| | | |
Sbjct 16036108 AAGCCCGCTGTTTCTATGGCTTCCGAATTGCCATGGAAAACATCCATTCTGAGATGTACA 16036167
Query 133366 TTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAACTATTCAACGC 133425
||| ||| ||||| ||||| | |||||| || | | | | || ||||||||
Sbjct 16036168 GTCTCCTC--ATTGACACTTATGTTAAAGATTCCAAAGAAAGGGAATTTCTCTTCAACGC 16036225
Query 133426 CATTAGCGA-ATTTCCTTGTATTAAAAAGAAATCTGACTGGGC 133467
| | | || | | |||||| | || ||||| | ||||||||
Sbjct 16036226 C-CTCGAGACAATGCCTTGTGTAAAGAAGAAGGCAGACTGGGC 16036267
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471669152476864
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |