Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq7837 170 2e-36 seq5056 150 2e-30 seq7785 134 2e-25 seq7823 96.9 4e-14 seq7857 91.5 2e-12 seq2095 91.5 2e-12 seq7787 87.8 2e-11 >seq7837 Length=29518589 Score = 170 bits (188), Expect = 2e-36 Identities = 168/217 (77%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| |||| || Sbjct 27548734 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGCGACGTGA 27548793 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| ||| |||||| ||||||| |||| | Sbjct 27548794 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGACGCCTCGCCCGCGATGCGCTCGAAGA 27548853 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 27548854 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 27548913 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 |||||||||| ||||||||||| | | || |||||| Sbjct 27548914 GCACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 27548950 Score = 170 bits (188), Expect = 2e-36 Identities = 168/217 (77%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| |||| || Sbjct 28025001 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGCGACGTGA 28024942 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| ||| |||||| ||||||| |||| | Sbjct 28024941 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGACGCCTCGCCCGCGATGCGCTCGAAGA 28024882 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 28024881 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 28024822 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 |||||||||| ||||||||||| | | || |||||| Sbjct 28024821 GCACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 28024785 Score = 167 bits (184), Expect = 3e-35 Identities = 167/217 (77%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| |||| || Sbjct 27052491 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGCGACGTGA 27052550 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| ||| |||||| ||||||| |||| | Sbjct 27052551 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGACGCCTCGCCCGCGATGCGCTCGAAGA 27052610 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 27052611 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 27052670 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 |||||||||| || |||||||| | | || |||||| Sbjct 27052671 GCACCTGCTTCAGTACCTTGTACACGTACACCGAGTA 27052707 >seq5056 Length=4279 Score = 150 bits (166), Expect = 2e-30 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| |||| || Sbjct 820 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGCGACGTGA 761 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| ||| |||||| ||||||| |||| | Sbjct 760 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGACGCCTCGCCCGCGATGCGCTCGAAGA 701 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| | ||||| || ||||||| ||| | |||| |||||||| |||||||| Sbjct 700 TGTCAGTAACAAAGGAATTCATGATGCTCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 641 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||||| ||||||||||||||| Sbjct 640 GCACCTGCTTCAGCACCTTGTAGATG 615 Score = 129 bits (142), Expect = 7e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| |||| || Sbjct 3624 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGCGACGTGA 3683 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||| | |||| ||| ||| |||||| | ||||| |||| | Sbjct 3684 TGGTCGACTGCTTGTTGTAATGCGTCAGGCGGGACGCCTCGCCCGCAATGCGCTCGAAGA 3743 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| | ||||| || ||||||| ||| | |||| |||||||| |||||||| Sbjct 3744 TGTCAGTAACAAAGGAATTCATGATGCTCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 3803 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||||| | ||||||||||||| Sbjct 3804 GCACCTGCTTCAACACCTTGTAGATG 3829 >seq7785 Length=4775541 Score = 134 bits (148), Expect = 2e-25 Identities = 151/202 (75%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| ||||||||||| || | || Sbjct 3348579 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 3348520 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| ||| |||||| | ||||||| |||| | Sbjct 3348519 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGAGGCCTCACCGGCGATGCGCTCGAAGA 3348460 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| |||||||| ||| || | Sbjct 3348459 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGAT 3348400 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| | ||| || || Sbjct 3348399 GAACCTGCTTCAACACTTTATA 3348378 >seq7823 Length=12955506 Score = 96.9 bits (106), Expect = 4e-14 Identities = 99/127 (78%), Gaps = 2/127 (2%) Strand=Plus/Minus Query 509035 GCCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCA-ACTCGCGCGAGA 509093 |||||||||||| ||||||||| ||||| ||| | |||||||| || | | |||| Sbjct 10579011 GCCCGAGAGCCGAGGCTTTGTGGAGAACTCCTACCTGGCCGGCCTCACACCCAC-CGAGT 10578953 Query 509094 TGTTTCTGCACATGATCGGCGGGCGCGAGGGCCTCGTCGACACGGCCGTCAAGACGGCCG 509153 | || | ||| || || || |||||||||||| |||||||||| |||||||| |||| Sbjct 10578952 TCTTCTTCCACGCCATGGGGGGTCGCGAGGGCCTCATCGACACGGCTGTCAAGACTGCCG 10578893 Query 509154 AGACGGG 509160 |||| || Sbjct 10578892 AGACTGG 10578886 Score = 89.7 bits (98), Expect = 6e-12 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 512050 CGTCATCTCCTTTGACGGCACCTACGTCAACGACCGCCACTTTGCGCTGGCCACCGACAC 512109 ||||||||||||||||||| |||||||||| |||||||||| || ||| | ||||| Sbjct 10572266 CGTCATCTCCTTTGACGGCTCCTACGTCAATTACCGCCACTTGGCTCTGCTCTGTGACAC 10572207 Query 512110 CATGTGCTGCCGCGGATCGGTGGTGGCCGTCACGCGCCACGGCTTCAACCGC 512161 |||| ||| ||||| || ||||| |||| || || || |||||||| Sbjct 10572206 CATGACCTGTCGCGGCCACTTGATGGCCATCACCCGACATGGGGTCAACCGC 10572155 Score = 89.7 bits (98), Expect = 6e-12 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 507105 AGCGGTTCAAGGGCAAGGAGGGTAGGATCCGCGGCAATTGCATGGGCAAGCGCGTCAACT 507164 ||||| | ||||||||||| || || |||| || || ||||||||||| || ||| Sbjct 10582830 AGCGGCTGAAGGGCAAGGAAGGCCGGGTCCGAGGGAACCTGATGGGCAAGCGGGTGGACT 10582771 Query 507165 TTACCGCGCGCGCCGTCATCAGCCCCGACCCCGAGATCGACATTGACGAGGTGGGCGTGC 507224 | | || ||| ||||||||| |||||||||| | || ||| ||| |||| ||||||| Sbjct 10582770 TCTCGGCCCGCACCGTCATCACCCCCGACCCCAACCTCTCCATCGACCAGGTCGGCGTGC 10582711 Query 507225 CC 507226 || Sbjct 10582710 CC 10582709 >seq7857 Length=43258702 Score = 91.5 bits (100), Expect = 2e-12 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || |||||| | || ||||| | |||| ||| || |||||| |||| ||||| Sbjct 18777930 GCTGCGAACTACTTAGATATCAAAGGTTTGCTTGATGTTACATGCAAGACTGTTGCCAAT 18777871 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAA 1592295 ||||||||||| || | || |||||||||||||||||||| || ||||| Sbjct 18777870 ATGATCAAGGGGAAAACTCCTGAGGAGATCCGCAAGACCTTCAATATCAA 18777821 >seq2095 Length=1400 Score = 91.5 bits (100), Expect = 2e-12 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 1254410 GCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTT 1254469 ||||||||| | |||||||| ||| |||||| | ||||||| |||| |||||||| Sbjct 1386 GCGCTTGTTGTAATGCGCCAGGCGGGAGGCCTCACCGGCGATGCGCTCGAAGATGTCGTT 1327 Query 1254470 GACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTG 1254529 ||| || |||||||||| ||| | |||| |||||||| ||| || || ||||| Sbjct 1326 GACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGATGAACCTG 1267 Query 1254530 CTTGAGCACCTTGTA 1254544 ||| | ||| || || Sbjct 1266 CTTCAACACTTTATA 1252 >seq7787 Length=23931036 Score = 87.8 bits (96), Expect = 2e-11 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224 || || ||||| | || || || || |||||| | |||||||| | |||| ||| || Sbjct 465063 ACACTTTTTGAACTTATTCTGGCTGCGAACTACTTAGACATCAAAGGTTTGCTTGATGTT 465004 Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284 |||||| |||| ||||| ||||||||||| || | || ||||||| || ||||||| Sbjct 465003 ACATGCAAGACTGTTGCCAATATGATCAAGGGGAAAACTCCTGAGGAGACCCACAAGACC 464944 Query 1592285 TTTAACATCAA 1592295 || || || || Sbjct 464943 TTCAATATAAA 464933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106493186815424