Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq7846 149 6e-31 seq7767 114 1e-20 seq7764 109 5e-19 seq7828 107 2e-18 seq7857 105 6e-18 seq9 98.7 9e-16 seq7858 96.9 3e-15 seq7782 86.0 6e-12 seq7823 84.2 2e-11 >seq7846 Length=12828309 Score = 149 bits (164), Expect = 6e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 |||||||||||||| | || || | |||||||| || || || || || || || || Sbjct 9163238 ACGATGCAGATCTTCGTGAAGACCTTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCC 9163179 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | ||||| | || | || || |||||||| |||||||| || || || ||||| Sbjct 9163178 AGTGACACCATCGAGAACGTCAAGGCGAAGATCCAGGACAAAGAGGGCATCCCCCCCGAC 9163119 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || | ||||||||||||||||||||||||||||| | | | | ||||||| || Sbjct 9163118 CAGCAGAGGTTGATCTTTGCCGGGAAACAGCTGGAGGACGGGCGCACCCTGTCAGACTAC 9163059 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || ||||| || || || |||||||| |||| ||| | ||||| Sbjct 9163058 AACATCCAGAAGGAGTCCACTCTGCACTTGGTCCTGCGCTTGAGGGGAGG 9163009 >seq7767 Length=50048226 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || | ||||| || || || || || || || ||||| || || || | Sbjct 33066957 GATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGATCCCTC 33066898 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| |||||| ||||| ||||| || || || |||||||| ||||| ||||| Sbjct 33066897 GGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCA 33066838 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | |||||||||| || || || ||||| ||| | | |||| || || || Sbjct 33066837 GCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTACAA 33066778 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||||||| || || || || | |||| | || | || || || Sbjct 33066777 CATTCAAAAGGAGTCTACTCTTCATCTTGTGTGGAGACTTCGTGGTGG 33066730 >seq7764 Length=47977530 Score = 109 bits (120), Expect = 5e-19 Identities = 157/218 (72%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||| | ||||| || | || || || || || ||||| || ||| || | Sbjct 26988424 GATGCAGATTTTTGTGAAAACCCTTATGGGGAAGACCATCACTCTCGAGGTTGAATCCTC 26988365 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 | |||||||||| ||||| |||||||| || || |||||||| ||||| ||||| Sbjct 26988364 AGGTACAGTAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCA 26988305 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACAT-GTCAGATTATA 24881 || | ||||||| | || || || ||||| || || |||| | || || || | Sbjct 26988304 GCA--GACTGATCTTCACTGGCAAGCAACTGGAAGACA-GACAAACTTTGTGTGACTACA 26988248 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919 |||||||||||| || || || || | |||||| || Sbjct 26988247 GCATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGA 26988210 Score = 86.0 bits (94), Expect = 6e-12 Identities = 153/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAG--TAGAAGCC 24760 ||||||||| || || ||||| || || || || || || || || | ||| || Sbjct 16767586 GATGCAGATTTTCATGAAAACCCTTCTGGGAAAGACCATCACTCTTTGAGGGTTGAACCC 16767645 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | | ||| |||||| |||||| ||| ||| || | |||||||| ||||||||| Sbjct 16767646 TCAAATACAATAGAAAATGTAAAAGCCGAGACCCAGGATCAGGAAGGAATTCCTCCCGAT 16767705 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAAC-ATGTCAGATTA 24879 || || | ||||||| | || || || ||||| | | || | || |||| || || Sbjct 16767706 CAGCAGAGACTGATCTTCACTGGCAAGCAACTGGAAG-GTGGACATACTTTGTCTGACTA 16767764 Query 24880 TAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919 |||||||||||||| || || || || | |||||| || Sbjct 16767765 CAACATTCAAAAGGAGTCTACTCTTCATCTCGTGTTGAGA 16767804 >seq7828 Length=21597463 Score = 107 bits (118), Expect = 2e-18 Identities = 154/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || | ||||| || || || || || || || ||||| || ||| || | Sbjct 14213587 GATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACTCTCGAGGTTGAACCCTC 14213528 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| |||||| |||| ||||| || | || |||||||| ||||| ||||| Sbjct 14213527 GGATACAATAGAAAATATAAAGGCCAAGATTCAGAATAAGGAAGGAATTCCTCCTGATCA 14213468 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | |||||||||| || || || ||||| ||| | |||| || || || Sbjct 14213467 GCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTCCTTTGTCTGACTACAA 14213408 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919 |||||||||||| || || || || | |||||| || Sbjct 14213407 CATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGA 14213371 >seq7857 Length=43258702 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || | ||||| || | || || || || || ||||| | ||| || | Sbjct 24177954 GATGCAGATTTTCGTGAAAACTCTTATGGGGAAGACCATCACTCTCGAGGCTGAACCCTC 24178013 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| || ||| ||||| ||||| || || || |||||||| ||||| ||||| Sbjct 24178014 GGATACAATACAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCA 24178073 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | ||||||||||| || || || ||||| ||| | | |||| || || || Sbjct 24178074 GCAGAGATTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTCTGTCTGACTACAA 24178133 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTT 24915 || ||||||||| || || || || | ||||| Sbjct 24178134 CACTCAAAAGGAGTCCACTCTTCATCTTGTGTT 24178166 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || |||||||| || || || | || || || || ||| Sbjct 31543899 ATGCAGATCTTCGTGAAGACCCTAACCGGCAAGACCATCCCCCTGGAGGTGGAGCCCAGT 31543840 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||| | |||| || || ||||||||||| ||||| || || || || || || Sbjct 31543839 GACATCATCGAAAATGTGAAGGCCAAGATCCAAGATAAAGAGGGCATCCCCCCTGACCAG 31543780 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | || ||||| || || |||||||| ||| | | | || ||||||||| Sbjct 31543779 CAGAGGCTCATTTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTATAAC 31543720 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || || || ||||| || ||| |||| Sbjct 31543719 ATCCAGAAAGAGTCGACCCTGCACCTGGT 31543691 >seq9 Length=2205763 Score = 98.7 bits (108), Expect = 9e-16 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTA--GAAGCC 24760 ||||||||||||| | || || || || || || || || || || || || || || Sbjct 1749554 GATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTGTCGAGCCC 1749495 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | ||||| | || | || ||| || ||||||||||| || || || || || || Sbjct 1749494 AGTGACACCATTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCGCCTGAC 1749435 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || ||| || | ||||| || ||||||||||| ||| | | ||||||| ||| Sbjct 1749434 CAGCAGCGTCTGGTTTTTGCGGGCAAACAGCTGGAAGATGGCCGTACTCTGTCAGACTAT 1749375 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || || || || || || || ||||||||| | || | || || ||| Sbjct 1749374 AATATCCAGAAAGAGTCCACCCTGCACTTGGTGCTTCGCCTACGGGGTGGC 1749324 >seq7858 Length=29646629 Score = 96.9 bits (106), Expect = 3e-15 Identities = 157/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 24705 TGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCG 24764 ||||||| || | ||||| || || || || || || || ||||| ||| || | | Sbjct 12424960 TGCAGATTTTCCTGAAAACCCTCACGGGGAAGACCATCACCCTCGAGCCTGAACCCTCGG 12424901 Query 24765 ACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAAC 24824 | ||| |||||| ||| | ||||| || || || |||||||| ||||| ||||| | Sbjct 12424900 ATACAATAGAAAATGTACAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAGC 12424841 Query 24825 AACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACA 24884 | | ||||| |||| || || || ||||| || | | |||| || || |||| Sbjct 12424840 AGAGACTGATCGTTGCTGGCAAGCAACTGGAAAATGGATGCACTTTGTCTGACTACAACA 12424781 Query 24885 TTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||||| || || || || | |||||| || | || || || Sbjct 12424780 TTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 12424735 >seq7782 Length=35566003 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/211 (69%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || || || || || || | || || ||||| || || ||| Sbjct 14262710 GATGCAGATCTTTGTGAAGACCCTGACGGGCAAGAACATCACCCTCGAGGTTGAGCCCAG 14262651 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || ||| || ||||||||||| || | || || || || || Sbjct 14262650 TGACACCATTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGACATCCCGCCTGACCA 14262591 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| |||| ||||| || ||||||||||| | | | | ||||||| ||| | Sbjct 14262590 GCAGCGTCTGATTTTTGCGGGCAAACAGCTGGAAGCTGGCCGTACTCTGTCAGACTATCA 14262531 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTG 24913 || || | || || || || | ||||||| Sbjct 14262530 TATCCAGA--GAGTCCACCCTGCTCTTGGTG 14262502 >seq7823 Length=12955506 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || || || || || || || ||| Sbjct 3355326 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 3355385 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || ||||||||||| ||||| || || || || || || Sbjct 3355386 GACACCATCGAAAACGTGAAGGCCAAGATCCAAGATAAAGAGGGCATCCCCCCTGACCAG 3355445 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | || ||||| || || |||||||| ||| | | | || ||||| ||| Sbjct 3355446 CAGAGGCTCATTTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 3355505 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || || || || || || ||| |||| Sbjct 3355506 ATCCAGAAAGAGTCAACTCTCCACCTGGT 3355534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449853330076160