Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq7767 89.7 4e-13 >seq7767 Length=50048226 Score = 89.7 bits (98), Expect = 4e-13 Identities = 167/245 (68%), Gaps = 8/245 (3%) Strand=Plus/Minus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 || ||||| ||||| || ||||| | || || || ||||| ||| |||| || | Sbjct 33066959 AAGATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGATCCC 33066900 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 ||||| | | | ||||| |||||| ||||| ||||| | || ||| Sbjct 33066899 TCGGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGAT 33066840 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGA----GGACGCCAAAACAATGGCGGA 107728 ||||||||||| || | ||| || || || ||||| |||||| || || | || Sbjct 33066839 CAGCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGC----ACTTTGTCTGA 33066784 Query 107729 CTACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAATAA 107788 |||||||||||||||||||||||| | || | |||| |||| | || || || ||| Sbjct 33066783 CTACAACATTCAAAAGGAGTCTACTCTTCATCTTGTGTGGAGACTTCGTGGTGGTGCTAA 33066724 Query 107789 TAAAA 107793 |||| Sbjct 33066723 GAAAA 33066719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398838531759808