Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_024303.1
Length=144898
Score E
Sequences producing significant alignments: (Bits) Value
seq7856 131 2e-25
seq7858 107 2e-18
seq7842 87.8 2e-12
>seq7856
Length=16994587
Score = 131 bits (144), Expect = 2e-25
Identities = 622/978 (64%), Gaps = 43/978 (4%)
Strand=Plus/Plus
Query 20324 AAGACCCTAGCTGCCCTTAAAACTGGCTTTGACTGTGCCAGTAAGCAGGAGATTCAGTTA 20383
|||||||| ||| || || || || |||||||||||||| ||| ||||| || ||
Sbjct 3470976 AAGACCCTTGCTACCATTGGGACAGGATTTGACTGTGCCAGCAAGACCGAGATACAATTG 3471035
Query 20384 CTGCAAAATCTGGGAGTTCACGCAGACAGGATACTTTTTGCGAATCCTTGTAAGCAGCCT 20443
| |||| ||| || || | |||| ||||| | | ||| ||||||||||| ||
Sbjct 3471036 GTACAAAGTCTTGGGGTGCCTCCAGAGAGGATTATCTGTGCAAATCCTTGTAAACAAGTG 3471095
Query 20444 TCGCATATAACGTATGCCGCTCAAACTGGAGTAAGGCTGATGACTTTTGATAGTGAAGAA 20503
|| || || | |||||| || | |||||| | |||||||||| ||||||||||
Sbjct 3471096 TCTCAGATTAAGTATGCTGCCAGTAATGGAGTCCAGATGATGACTTTCGATAGTGAAGTT 3471155
Query 20504 GAGCTTACCAAAATTGATCGCCTGCACCATGATGCTAAGCTGGTACTGAGGATTAAAGTG 20563
|| | | ||| ||| | ||| | | || ||| |||| || ||||
Sbjct 3471156 GAATTGATGAAAGTTGCCAGGGCGCATCCAAAGGCAAAGTTGGTTTTGCAGATTGCCACT 3471215
Query 20564 GATGACTCTAACTCAGACAGCATACTGAGTGTCAAGTTTGGGGCTCCTATTGAAGCCAGC 20623
||||| || || ||| | | || | ||| || ||||| || | | || ||||
Sbjct 3471216 GATGATTCCAAAGCAGTCTGTCACCTCATTGTTAAATTTGGTGCCACACTCAAAATCAGC 3471275
Query 20624 CAACGCCTGCTAAAACAGGCCAAAAAATTAGGCCTAGAAGTGATCGGAGTCAGCTTCCAC 20683
| || | ||| ||| | | | || | || || || | ||||||||||||
Sbjct 3471276 AGGCTTCTTTTGGAACGGGCAAGAGAGCTAAATATTGATGTCATTGCTGTCAGCTTCCAC 3471335
Query 20684 GTGGGCAGTGGCTGCAAAGATGCACAGGCTTACAGAAAAGCCATAGCTGAGGCCAGGAGA 20743
||||| |||||||||| || | || | | || ||||||| |||| ||| | |
Sbjct 3471336 GTGGGAAGTGGCTGCACCCATCCTGAGACCTTCATGCAAGCCATCTCTGATGCCCGCTGT 3471395
Query 20744 GCTTTTGACTTTGGCACGCTGA--TGGGCTTTGACATGTACCTCTTGGATATTGGTGGCG 20801
| |||||| | || ||||| | || || ||||||| || | || |||||||| |
Sbjct 3471396 GTCTTTGACATGGG--AGCTGAGGTTGGTTTCAACATGTATCTGCTTGACATTGGTGGTG 3471453
Query 20802 GCTTTCCCGGGATCAATGAGATTG---AGCCAACTTTTGAGGACATTGCAGAAGTCATTA 20858
||||| || ||||| |||| || ||| | ||||| || || | || || |
Sbjct 3471454 GCTTT-CCTGGATC--TGAGGATGTAAAGCTTAAATTTGAAGAGATCACCAGTGTGATCA 3471510
Query 20859 ACGCGGCCTTGGAAAGGCATTTTCCAGATGATGCCAACCTGACAATTATTGGTGAACCTG 20918
|| | ||| |||| | | | || |||| ||| | | || ||| || | | || |
Sbjct 3471511 ACCCAGCCCTGGACAAGTACTTCCCAGCTGACTCAGAGGTGCGAATCATAGCAGGGCCCG 3471570
Query 20919 GCAGGTACTACGCTACCTCGGCGCTAACTATAGCTGTAACTGTGATTGCTAAAAA--GTG 20976
|||| ||||| | | |||| || | | | | || | | ||||| |||||
Sbjct 3471571 GCAGATACTATGTTGCCTCAGCCTTCATGCTCACAGTTAACATCATTGCCAAAAAACTCA 3471630
Query 20977 TGTTGAAG--ACA------CTC-----CTGGAGAT------------AAAAAGTTTATGT 21011
| || ||| ||| ||| || |||| ||| |||||||
Sbjct 3471631 TATTAAAGGAACAGACAGGCTCTGATGATGAAGATGAGTCGAGTGAACAAACCTTTATGT 3471690
Query 21012 ATTATGTTAATGATGGCGTCTATGGCAGTTTTAACTGCATATTATTTAACCATGCTCGTC 21071
|||| | |||||||| || ||||| ||||| ||||| | | | | ||||| |
Sbjct 3471691 ATTACCTGAATGATGGAGTGTATGGATCATTTAATTGCATCCTCTATGATCATGCCCACG 3471750
Query 21072 CTATGCCTATGCTGCTTAA-AGAAAAACGCCTTGAAGACAAAGACTATGTTTCTAGCATT 21130
| ||| | |||| || ||| | | || || || || || || | |||||
Sbjct 3471751 TGAAGCCCCTTCTGCAGAATAGACACAAACC-AGATGAGAAGTACCATTCAACCAGCATA 3471809
Query 21131 TGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCAGAGCTT 21190
| ||| || | || |||||| | ||| |||||| || | || || |||| ||| |
Sbjct 3471810 TAGGGACCAACGTGTGATGGCCTGGATCACATTGTCCAGGGCTGCGACTTGCCCGAGATG 3471869
Query 21191 CAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACA-GCTTGGTCAGCT-CTT 21248
|| |||||||| ||| | | |||||||||||||| ||||||| |||| | ||| |||
Sbjct 3471870 CACGTGGGCGATTGGATGGTCTTTGAAAACATGGGTGCTTACACTCTTG--CTGCTGCTT 3471927
Query 21249 CAACCTTTAACGGCTTCC 21266
| || || || || ||||
Sbjct 3471928 CTACTTTCAATGGGTTCC 3471945
>seq7858
Length=29646629
Score = 107 bits (118), Expect = 2e-18
Identities = 616/977 (63%), Gaps = 40/977 (4%)
Strand=Plus/Plus
Query 20324 AAGACCCTAGCTGCCCTTAAAACTGGCTTTGACTGTGCCAGTAAGCAGGAGATTCAGTTA 20383
|||||||| ||| || | || || |||||||||||||| ||| ||||| || ||
Sbjct 9348576 AAGACCCTTGCTACCACTGGGACAGGATTTGACTGTGCCAGCAAGACTGAGATACAATTG 9348635
Query 20384 CTGCAAAATCTGGGAGTTCACGCAGACAGGATACTTTTTGCGAATCCTTGTAAGCAGCCT 20443
| ||| ||| || || | |||| ||||| | | ||| |||||||| || ||
Sbjct 9348636 GTATAAAGTCTTGGGGTGCCTCCAGAGAGGATTATCTATGCAAATCCTTGCAAACAAGTG 9348695
Query 20444 TCGCATATAACGTATGCCGCTCAAACTGGAGTAAGGCTGATGACTTTTGATAGTGAAGAA 20503
|| || || | |||||| || | | |||||| | ||||||||| |||||||||||
Sbjct 9348696 TCTCAGATTAAGTATGCTGCCAATAATGGAGTCCAGATGATGACTTCTGATAGTGAAGTT 9348755
Query 20504 GAGCTTACCAAAATTGATCGCCTGCACCATGATGCTAAGCTGGTACTGAGGATTAAAGTG 20563
|| || | ||| ||| | ||| | | || ||| |||| || |||||
Sbjct 9348756 GAACTGATGAAAGTTGCCGGGGCGCATCCAAAGGCCAAGTTGGTTTTGCGGATTGCCACC 9348815
Query 20564 GATGACTCTAACTCAGACAGCATACTGAGTGTCAAGTTTGGGGCTCCTATTGAAGCCAGC 20623
||||| || || ||| | || ||||| || ||||| || | | || ||||
Sbjct 9348816 GATGATTCCAAAGCAGTCTATCGCCTCAGTGTTAAATTTGGTGCCACACTCAAAATCAGC 9348875
Query 20624 CAACGCCTGCTAAAACAGGCCAAAAAATTAGGCCTAGAAGTGATCGGAGTCAGCTTCCAC 20683
| || | ||| || | | || || | | || || || |||||||||||
Sbjct 9348876 AGGCTTCTTTTGGAACGGGTGAGAGAACTAAATATTGTTGTCATTGGTGTCAGCTTCCAT 9348935
Query 20684 GTGGGCAGTGGCTGCAAAGATGCACAGGCTTACAGAAAAGCCATAGCTGAGGCCAGGAGA 20743
||||| |||||||||| ||| | || | | ||||||| |||| ||| |
Sbjct 9348936 GTGGGAAGTGGCTGCACGGATCCTGAGACCTTTGTGCAAGCCATCTCTGATGCCCACTGT 9348995
Query 20744 GCTTTTGACTTTGGCACGCTGATGGGCTTTGACATGTACCTCTTGGATATTGGTGGCGGC 20803
| |||||| | || | | | | || || |||||| || | ||||| |||| ||
Sbjct 9348996 GTCTTTGACATGGGAGCTCAGGTTGGTTTCAGCATGTATCTGCTTGATATCAGTGGTGGT 9349055
Query 20804 TTTCCCGGGATCAATGAGATTG---AGCCAACTTTTGAGGACATTGCAGAAGTCATTAAC 20860
||||| || ||| |||| || ||| | ||||| || || | || || |||
Sbjct 9349056 TTTCCTGG-ATC--TGAGGATGTGAAGCTTAAATTTGAAGAGATCACCAGTGTGATCAAC 9349112
Query 20861 GCGGCCTTGGAAAGGCATTTTCCAGATGATGCCAACCTGACAATTATTGGTGAACCTGGC 20920
| ||| |||| | | | || | | || | || ||| || | || || ||
Sbjct 9349113 CCAGCCCTGGACAAGTACTTCCTGGCCGACTCGGGGGTGCGAATCATAGTGGAGCCCAGC 9349172
Query 20921 AGGTACTACGCTACCTCGGCGCTAACTATAGCTGTAACTGTGATTGCTAAAAAG--TGTG 20978
|| ||||| | | |||| || | | | | || | | ||||| ||||| |||
Sbjct 9349173 AGATACTATGTTGCCTCAGCCTTCATGCTCACAGTGAACATCATTGCCAAAAAACTTGTA 9349232
Query 20979 TTGAAG------ACA--CTCC-----TGGAGATAA------------AAAGTTTATGTAT 21013
|| ||| ||| ||| || |||| | || |||||||||
Sbjct 9349233 TTAAAGGAACAGACAGGCTCTGATGATGAAGATGAGTCGAGTGAACAAACCTTTATGTAT 9349292
Query 21014 TATGTTAATGATGGCGTCTATGGCAGTTTTAACTGCATATTATTTAACCATGCTCGTCCT 21073
|| || |||||||| || ||||| ||||| ||||| | | | | ||||| |
Sbjct 9349293 TACGTGAATGATGGAGTGTATGGATCATTTAATTGCATCCTCTATGATCATGCCCACGTG 9349352
Query 21074 ATGCCTATGCTGCTTAA-AGAAA-AACGCCTTGAAGACAAAGACTATGTTTCTAGCATTT 21131
| ||| | |||| || ||| ||| || || || || ||||| | ||||| |
Sbjct 9349353 AAGCCCCTTCTGCAGAAGAGACCCAACACCA-GATGAGAAGTACTATTCAACCAGCATAT 9349411
Query 21132 GGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCAGAGCTTC 21191
|||| || | || || | | | ||||||| ||| ||| || || |||| ||| | |
Sbjct 9349412 GGGGACCAACATGTGACGACCTGGATTGCACTGTCGAGCACTGCGACTTGCCCGAGATGC 9349471
Query 21192 AAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACA-GCTTGGTCAGCT-CTTC 21249
| |||||||| ||| | | |||||||||||||| ||||||| | ||| | ||| ||||
Sbjct 9349472 ACGTGGGCGATTGGATGGTCTTTGAAAACATGGGTGCTTACACGGTTG--CTGCTGCTTC 9349529
Query 21250 AACCTTTAACGGCTTCC 21266
|| || ||||| ||||
Sbjct 9349530 TACTTTCAACGGGTTCC 9349546
>seq7842
Length=42459490
Score = 87.8 bits (96), Expect = 2e-12
Identities = 108/144 (75%), Gaps = 4/144 (3%)
Strand=Plus/Minus
Query 21125 AGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCA 21184
||||| ||||| || | || || ||| | ||| ||||||| |||| || || ||||
Sbjct 7799190 AGCATATGGGGACCAACATGTGACGGCCTGGATCGCATTGTCGAGCGCTGCGACTTGCCC 7799131
Query 21185 GAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACA-GCTTGGTCAG 21243
||| | || |||||||| ||| | | |||||||||||||| ||||||| | ||| | |
Sbjct 7799130 GAGATGCACGTGGGCGATTGGATGGTCTTTGAAAACATGGGTGCTTACACGGTTG--CTG 7799073
Query 21244 CT-CTTCAACCTTTAACGGCTTCC 21266
|| |||| || || ||||| ||||
Sbjct 7799072 CTGCTTCTACTTTCAACGGGTTCC 7799049
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 463499987112960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |