Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq7856 131 2e-25 seq7858 107 2e-18 seq7842 87.8 2e-12 >seq7856 Length=16994587 Score = 131 bits (144), Expect = 2e-25 Identities = 622/978 (64%), Gaps = 43/978 (4%) Strand=Plus/Plus Query 20324 AAGACCCTAGCTGCCCTTAAAACTGGCTTTGACTGTGCCAGTAAGCAGGAGATTCAGTTA 20383 |||||||| ||| || || || || |||||||||||||| ||| ||||| || || Sbjct 3470976 AAGACCCTTGCTACCATTGGGACAGGATTTGACTGTGCCAGCAAGACCGAGATACAATTG 3471035 Query 20384 CTGCAAAATCTGGGAGTTCACGCAGACAGGATACTTTTTGCGAATCCTTGTAAGCAGCCT 20443 | |||| ||| || || | |||| ||||| | | ||| ||||||||||| || Sbjct 3471036 GTACAAAGTCTTGGGGTGCCTCCAGAGAGGATTATCTGTGCAAATCCTTGTAAACAAGTG 3471095 Query 20444 TCGCATATAACGTATGCCGCTCAAACTGGAGTAAGGCTGATGACTTTTGATAGTGAAGAA 20503 || || || | |||||| || | |||||| | |||||||||| |||||||||| Sbjct 3471096 TCTCAGATTAAGTATGCTGCCAGTAATGGAGTCCAGATGATGACTTTCGATAGTGAAGTT 3471155 Query 20504 GAGCTTACCAAAATTGATCGCCTGCACCATGATGCTAAGCTGGTACTGAGGATTAAAGTG 20563 || | | ||| ||| | ||| | | || ||| |||| || |||| Sbjct 3471156 GAATTGATGAAAGTTGCCAGGGCGCATCCAAAGGCAAAGTTGGTTTTGCAGATTGCCACT 3471215 Query 20564 GATGACTCTAACTCAGACAGCATACTGAGTGTCAAGTTTGGGGCTCCTATTGAAGCCAGC 20623 ||||| || || ||| | | || | ||| || ||||| || | | || |||| Sbjct 3471216 GATGATTCCAAAGCAGTCTGTCACCTCATTGTTAAATTTGGTGCCACACTCAAAATCAGC 3471275 Query 20624 CAACGCCTGCTAAAACAGGCCAAAAAATTAGGCCTAGAAGTGATCGGAGTCAGCTTCCAC 20683 | || | ||| ||| | | | || | || || || | |||||||||||| Sbjct 3471276 AGGCTTCTTTTGGAACGGGCAAGAGAGCTAAATATTGATGTCATTGCTGTCAGCTTCCAC 3471335 Query 20684 GTGGGCAGTGGCTGCAAAGATGCACAGGCTTACAGAAAAGCCATAGCTGAGGCCAGGAGA 20743 ||||| |||||||||| || | || | | || ||||||| |||| ||| | | Sbjct 3471336 GTGGGAAGTGGCTGCACCCATCCTGAGACCTTCATGCAAGCCATCTCTGATGCCCGCTGT 3471395 Query 20744 GCTTTTGACTTTGGCACGCTGA--TGGGCTTTGACATGTACCTCTTGGATATTGGTGGCG 20801 | |||||| | || ||||| | || || ||||||| || | || |||||||| | Sbjct 3471396 GTCTTTGACATGGG--AGCTGAGGTTGGTTTCAACATGTATCTGCTTGACATTGGTGGTG 3471453 Query 20802 GCTTTCCCGGGATCAATGAGATTG---AGCCAACTTTTGAGGACATTGCAGAAGTCATTA 20858 ||||| || ||||| |||| || ||| | ||||| || || | || || | Sbjct 3471454 GCTTT-CCTGGATC--TGAGGATGTAAAGCTTAAATTTGAAGAGATCACCAGTGTGATCA 3471510 Query 20859 ACGCGGCCTTGGAAAGGCATTTTCCAGATGATGCCAACCTGACAATTATTGGTGAACCTG 20918 || | ||| |||| | | | || |||| ||| | | || ||| || | | || | Sbjct 3471511 ACCCAGCCCTGGACAAGTACTTCCCAGCTGACTCAGAGGTGCGAATCATAGCAGGGCCCG 3471570 Query 20919 GCAGGTACTACGCTACCTCGGCGCTAACTATAGCTGTAACTGTGATTGCTAAAAA--GTG 20976 |||| ||||| | | |||| || | | | | || | | ||||| ||||| Sbjct 3471571 GCAGATACTATGTTGCCTCAGCCTTCATGCTCACAGTTAACATCATTGCCAAAAAACTCA 3471630 Query 20977 TGTTGAAG--ACA------CTC-----CTGGAGAT------------AAAAAGTTTATGT 21011 | || ||| ||| ||| || |||| ||| ||||||| Sbjct 3471631 TATTAAAGGAACAGACAGGCTCTGATGATGAAGATGAGTCGAGTGAACAAACCTTTATGT 3471690 Query 21012 ATTATGTTAATGATGGCGTCTATGGCAGTTTTAACTGCATATTATTTAACCATGCTCGTC 21071 |||| | |||||||| || ||||| ||||| ||||| | | | | ||||| | Sbjct 3471691 ATTACCTGAATGATGGAGTGTATGGATCATTTAATTGCATCCTCTATGATCATGCCCACG 3471750 Query 21072 CTATGCCTATGCTGCTTAA-AGAAAAACGCCTTGAAGACAAAGACTATGTTTCTAGCATT 21130 | ||| | |||| || ||| | | || || || || || || | ||||| Sbjct 3471751 TGAAGCCCCTTCTGCAGAATAGACACAAACC-AGATGAGAAGTACCATTCAACCAGCATA 3471809 Query 21131 TGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCAGAGCTT 21190 | ||| || | || |||||| | ||| |||||| || | || || |||| ||| | Sbjct 3471810 TAGGGACCAACGTGTGATGGCCTGGATCACATTGTCCAGGGCTGCGACTTGCCCGAGATG 3471869 Query 21191 CAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACA-GCTTGGTCAGCT-CTT 21248 || |||||||| ||| | | |||||||||||||| ||||||| |||| | ||| ||| Sbjct 3471870 CACGTGGGCGATTGGATGGTCTTTGAAAACATGGGTGCTTACACTCTTG--CTGCTGCTT 3471927 Query 21249 CAACCTTTAACGGCTTCC 21266 | || || || || |||| Sbjct 3471928 CTACTTTCAATGGGTTCC 3471945 >seq7858 Length=29646629 Score = 107 bits (118), Expect = 2e-18 Identities = 616/977 (63%), Gaps = 40/977 (4%) Strand=Plus/Plus Query 20324 AAGACCCTAGCTGCCCTTAAAACTGGCTTTGACTGTGCCAGTAAGCAGGAGATTCAGTTA 20383 |||||||| ||| || | || || |||||||||||||| ||| ||||| || || Sbjct 9348576 AAGACCCTTGCTACCACTGGGACAGGATTTGACTGTGCCAGCAAGACTGAGATACAATTG 9348635 Query 20384 CTGCAAAATCTGGGAGTTCACGCAGACAGGATACTTTTTGCGAATCCTTGTAAGCAGCCT 20443 | ||| ||| || || | |||| ||||| | | ||| |||||||| || || Sbjct 9348636 GTATAAAGTCTTGGGGTGCCTCCAGAGAGGATTATCTATGCAAATCCTTGCAAACAAGTG 9348695 Query 20444 TCGCATATAACGTATGCCGCTCAAACTGGAGTAAGGCTGATGACTTTTGATAGTGAAGAA 20503 || || || | |||||| || | | |||||| | ||||||||| ||||||||||| Sbjct 9348696 TCTCAGATTAAGTATGCTGCCAATAATGGAGTCCAGATGATGACTTCTGATAGTGAAGTT 9348755 Query 20504 GAGCTTACCAAAATTGATCGCCTGCACCATGATGCTAAGCTGGTACTGAGGATTAAAGTG 20563 || || | ||| ||| | ||| | | || ||| |||| || ||||| Sbjct 9348756 GAACTGATGAAAGTTGCCGGGGCGCATCCAAAGGCCAAGTTGGTTTTGCGGATTGCCACC 9348815 Query 20564 GATGACTCTAACTCAGACAGCATACTGAGTGTCAAGTTTGGGGCTCCTATTGAAGCCAGC 20623 ||||| || || ||| | || ||||| || ||||| || | | || |||| Sbjct 9348816 GATGATTCCAAAGCAGTCTATCGCCTCAGTGTTAAATTTGGTGCCACACTCAAAATCAGC 9348875 Query 20624 CAACGCCTGCTAAAACAGGCCAAAAAATTAGGCCTAGAAGTGATCGGAGTCAGCTTCCAC 20683 | || | ||| || | | || || | | || || || ||||||||||| Sbjct 9348876 AGGCTTCTTTTGGAACGGGTGAGAGAACTAAATATTGTTGTCATTGGTGTCAGCTTCCAT 9348935 Query 20684 GTGGGCAGTGGCTGCAAAGATGCACAGGCTTACAGAAAAGCCATAGCTGAGGCCAGGAGA 20743 ||||| |||||||||| ||| | || | | ||||||| |||| ||| | Sbjct 9348936 GTGGGAAGTGGCTGCACGGATCCTGAGACCTTTGTGCAAGCCATCTCTGATGCCCACTGT 9348995 Query 20744 GCTTTTGACTTTGGCACGCTGATGGGCTTTGACATGTACCTCTTGGATATTGGTGGCGGC 20803 | |||||| | || | | | | || || |||||| || | ||||| |||| || Sbjct 9348996 GTCTTTGACATGGGAGCTCAGGTTGGTTTCAGCATGTATCTGCTTGATATCAGTGGTGGT 9349055 Query 20804 TTTCCCGGGATCAATGAGATTG---AGCCAACTTTTGAGGACATTGCAGAAGTCATTAAC 20860 ||||| || ||| |||| || ||| | ||||| || || | || || ||| Sbjct 9349056 TTTCCTGG-ATC--TGAGGATGTGAAGCTTAAATTTGAAGAGATCACCAGTGTGATCAAC 9349112 Query 20861 GCGGCCTTGGAAAGGCATTTTCCAGATGATGCCAACCTGACAATTATTGGTGAACCTGGC 20920 | ||| |||| | | | || | | || | || ||| || | || || || Sbjct 9349113 CCAGCCCTGGACAAGTACTTCCTGGCCGACTCGGGGGTGCGAATCATAGTGGAGCCCAGC 9349172 Query 20921 AGGTACTACGCTACCTCGGCGCTAACTATAGCTGTAACTGTGATTGCTAAAAAG--TGTG 20978 || ||||| | | |||| || | | | | || | | ||||| ||||| ||| Sbjct 9349173 AGATACTATGTTGCCTCAGCCTTCATGCTCACAGTGAACATCATTGCCAAAAAACTTGTA 9349232 Query 20979 TTGAAG------ACA--CTCC-----TGGAGATAA------------AAAGTTTATGTAT 21013 || ||| ||| ||| || |||| | || ||||||||| Sbjct 9349233 TTAAAGGAACAGACAGGCTCTGATGATGAAGATGAGTCGAGTGAACAAACCTTTATGTAT 9349292 Query 21014 TATGTTAATGATGGCGTCTATGGCAGTTTTAACTGCATATTATTTAACCATGCTCGTCCT 21073 || || |||||||| || ||||| ||||| ||||| | | | | ||||| | Sbjct 9349293 TACGTGAATGATGGAGTGTATGGATCATTTAATTGCATCCTCTATGATCATGCCCACGTG 9349352 Query 21074 ATGCCTATGCTGCTTAA-AGAAA-AACGCCTTGAAGACAAAGACTATGTTTCTAGCATTT 21131 | ||| | |||| || ||| ||| || || || || ||||| | ||||| | Sbjct 9349353 AAGCCCCTTCTGCAGAAGAGACCCAACACCA-GATGAGAAGTACTATTCAACCAGCATAT 9349411 Query 21132 GGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCAGAGCTTC 21191 |||| || | || || | | | ||||||| ||| ||| || || |||| ||| | | Sbjct 9349412 GGGGACCAACATGTGACGACCTGGATTGCACTGTCGAGCACTGCGACTTGCCCGAGATGC 9349471 Query 21192 AAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACA-GCTTGGTCAGCT-CTTC 21249 | |||||||| ||| | | |||||||||||||| ||||||| | ||| | ||| |||| Sbjct 9349472 ACGTGGGCGATTGGATGGTCTTTGAAAACATGGGTGCTTACACGGTTG--CTGCTGCTTC 9349529 Query 21250 AACCTTTAACGGCTTCC 21266 || || ||||| |||| Sbjct 9349530 TACTTTCAACGGGTTCC 9349546 >seq7842 Length=42459490 Score = 87.8 bits (96), Expect = 2e-12 Identities = 108/144 (75%), Gaps = 4/144 (3%) Strand=Plus/Minus Query 21125 AGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCA 21184 ||||| ||||| || | || || ||| | ||| ||||||| |||| || || |||| Sbjct 7799190 AGCATATGGGGACCAACATGTGACGGCCTGGATCGCATTGTCGAGCGCTGCGACTTGCCC 7799131 Query 21185 GAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACA-GCTTGGTCAG 21243 ||| | || |||||||| ||| | | |||||||||||||| ||||||| | ||| | | Sbjct 7799130 GAGATGCACGTGGGCGATTGGATGGTCTTTGAAAACATGGGTGCTTACACGGTTG--CTG 7799073 Query 21244 CT-CTTCAACCTTTAACGGCTTCC 21266 || |||| || || ||||| |||| Sbjct 7799072 CTGCTTCTACTTTCAACGGGTTCC 7799049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463499987112960