Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq7857 145 1e-29 seq7767 145 1e-29 seq7846 136 8e-27 seq7828 136 8e-27 seq7858 122 2e-22 seq7764 111 3e-19 seq7818 98.7 2e-15 seq20 96.9 7e-15 seq7848 91.5 3e-13 seq7842 91.5 3e-13 >seq7857 Length=43258702 Score = 145 bits (160), Expect = 1e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||||| ||||||| | |||||| || || |||||||| || ||||||||||| Sbjct 31543673 CCACCTCTCAGGTGCAGAACCAGGTGCAGGGTCGACTCTTTCTGGATGTTATAATCAGAA 31543732 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| | | || ||||| || || || || ||||| || || || || || || || || Sbjct 31543733 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAAATGAGCCTCTGCTGGTCAGGGGGG 31543792 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || || |||||||| ||||| || || |||||||| || | ||| | || || || Sbjct 31543793 ATGCCCTCTTTATCTTGGATCTTGGCCTTCACATTTTCGATGATGTCACTGGGCTCCACC 31543852 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 |||| | || |||||||| || | ||||| || || ||||||||| Sbjct 31543853 TCCAGGGGGATGGTCTTGCCGGTTAGGGTCTTCACGAAGATCTGCATT 31543900 Score = 140 bits (154), Expect = 6e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || |||| | | ||||| | ||| ||||| || |||||||| ||||| |||||||| Sbjct 31543445 CCACCCCTCATATGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATATTGTAATCAGAA 31543504 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| | | || ||||| | || || | |||||||| || || || || || || || Sbjct 31543505 AGAGTGCGGCCATCTTCCATCTGCTTGCTGGCAAAGATAAGCCTCTGCTGGTCAGGGGGG 31543564 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || || |||| ||| || || || || ||||||||||| || ||| | || || || Sbjct 31543565 ATGCCCTCTTTATATTGGATATTCGCCTTCACATTTTCAATGGTGTCACTGGGCTCCACC 31543624 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || |||||||| || | ||||| || || |||||||| Sbjct 31543625 TCCAGGGTGATGGTCTTGCCGGTTAGGGTCTTCACGAAGATCTGCAT 31543671 Score = 132 bits (146), Expect = 9e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || ||||| || || || || | || || ||||| ||| | | || ||||| ||||| Sbjct 24178157 TGAAGAGTGGACTCCTTTTGAGTGTTGTAGTCAGACAGAGTGCGTCCATCTTCCAGTTGC 24178098 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || ||||||||||| | ||| || ||||| ||||| |||||||||||||| |||||||| Sbjct 24178097 TTGCCAGCAAAGATCAATCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGAATCTTG 24178038 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 || |||||||||| || ||||| ||||| | || | ||| || ||||| || | Sbjct 24178037 GCCTTTACATTTTGTATTGTATCCGAGGGTTCAGCCTCGAGAGTGATGGTCTTCCCCATA 24177978 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 | || || || || |||||||| Sbjct 24177977 AGAGTTTTCACGAAAATCTGCAT 24177955 >seq7767 Length=50048226 Score = 145 bits (160), Expect = 1e-29 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || |||||||| || || || || || || ||||| | | | | || ||||| ||||| Sbjct 33066754 TGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATCTTCCAGTTGC 33066813 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || ||||||||||| ||||| || ||||| ||||| |||||||||||||| |||||||| Sbjct 33066814 TTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGAATCTTG 33066873 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 || ||||||||||| || ||||| || || || || | || || ||||| || || Sbjct 33066874 GCCTTTACATTTTCTATTGTATCCGAGGGATCAACCTCGAGGGTGATGGTCTTCCCCGTA 33066933 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 | || || || || |||||||| Sbjct 33066934 AGGGTTTTCACGAAAATCTGCAT 33066956 >seq7846 Length=12828309 Score = 136 bits (150), Expect = 8e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 |||||| ||||| ||||| || ||||||||||| || || ||||| || || || || || Sbjct 9163008 ACCTCCCCTCAAGCGCAGGACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCTGA 9163067 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 || | | ||||| || || ||||| || |||||||| | || || || || || || Sbjct 9163068 CAGGGTGCGCCCGTCCTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCGGGGGG 9163127 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || || || || || || ||||| || || || || || || || ||| | || || || Sbjct 9163128 GATGCCCTCTTTGTCCTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCAC 9163187 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || ||||| || ||||| ||||| || || |||||||| Sbjct 9163188 CTCCAGGGTGATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCAT 9163235 >seq7828 Length=21597463 Score = 136 bits (150), Expect = 8e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || ||||| || || || || || || || ||||| | | | || ||||| ||||| Sbjct 14213384 TGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGGACGTCCATCTTCCAGTTGC 14213443 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || ||||||||||| ||||| || ||||| ||||| ||||||||||||| |||||||| Sbjct 14213444 TTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATTCTGAATCTTG 14213503 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 || |||| |||||| || ||||| ||||| || || | ||| || ||||| || || Sbjct 14213504 GCCTTTATATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGATGGTCTTCCCCGTA 14213563 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 | || || || || |||||||| Sbjct 14213564 AGGGTTTTCACGAAAATCTGCAT 14213586 Score = 122 bits (134), Expect = 2e-22 Identities = 153/209 (73%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 82602 ACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCT 82661 || |||||||| || || |||||||| |||||||| || || ||| | | || |||||| Sbjct 10995417 ACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACAGCCATCTTCT 10995358 Query 82662 AGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGA 82721 || | ||| || ||||| | || | || || || || || || || |||| ||||| Sbjct 10995357 AGCTATTTGCCCGCAAAAGTCAGACACTGCTGGTCAGGCGGGATGCCCTCCTGGTCTTGG 10995298 Query 82722 ATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTG 82781 || || ||||| ||||| ||| | || ||| | || || || || | || || |||||| Sbjct 10995297 ATTTTGGCTTTGACATTCTCAGTGGTGTCACTGGGCTCGACCTC-AGGGTGATGGTCTTG 10995239 Query 82782 CCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| | | ||| ||||| |||||||| Sbjct 10995238 CCTGTGAGGGCCTTCACAAAGATCTGCAT 10995210 >seq7858 Length=29646629 Score = 122 bits (134), Expect = 2e-22 Identities = 148/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || |||||||| || || || || || || ||||| | | | | || | ||| ||||| Sbjct 12424759 TGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCATCCATTTTCCAGTTGC 12424818 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || ||||||| ||| ||||| || ||||| ||||| |||||||||||||| |||||||| Sbjct 12424819 TTGCCAGCAACGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGAATCTTG 12424878 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 || | ||||||||| || ||||| ||||| || | || || ||||| || || Sbjct 12424879 GCCTGTACATTTTCTATTGTATCCGAGGGTTCAGGCTCGAGGGTGATGGTCTTCCCCGTG 12424938 Query 82788 AACGTCTTTACAAATATCTGCA 82809 | || || | || ||||||| Sbjct 12424939 AGGGTTTTCAGGAAAATCTGCA 12424960 >seq7764 Length=47977530 Score = 111 bits (122), Expect = 3e-19 Identities = 149/204 (73%), Gaps = 4/204 (2%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || ||||| || || || || || | || ||| | | | || | |||||| ||||| Sbjct 26988223 TGAAGAGTGGACTCCTTTTGAATGCTGTAGTCACACAAAGTTTGTCTGTCTTCCAGTTGC 26988282 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || |||| ||||| ||||| | ||||| ||||| |||||||||||||| || ||||| Sbjct 26988283 TTGCCAGTGAAGATCAGTCT--GCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTG 26988340 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGG-TTCTACTTCCAAAGTTATCGTCTTGCCTGT 82786 || ||||||||||| | ||| | | ||| ||| || || | ||| || ||||| || | Sbjct 26988341 GCCTTTACATTTTCTACTGTA-CCTGAGGATTCAACCTCGAGAGTGATGGTCTTCCCCAT 26988399 Query 82787 CAACGTCTTTACAAATATCTGCAT 82810 | || || ||||| |||||||| Sbjct 26988400 AAGGGTTTTCACAAAAATCTGCAT 26988423 Score = 98.7 bits (108), Expect = 2e-15 Identities = 107/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || |||||||| || || || || || || ||||| | | | || |||| ||||| Sbjct 16767791 TGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGTCCACCTTCCAGTTGC 16767732 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || |||| ||||| ||||| || ||||| ||||| |||||||||| ||| || ||| Sbjct 16767731 TTGCCAGTGAAGATCAGTCTCTGCTGATCGGGAGGAATTCCTTCCTGATCCTGGGTCTCG 16767672 Query 82728 GCTTTTACATTTTCAATCGTAT 82749 |||||||||||||| || |||| Sbjct 16767671 GCTTTTACATTTTCTATTGTAT 16767650 Score = 96.9 bits (106), Expect = 7e-15 Identities = 101/133 (76%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 82678 AGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACAT 82737 |||| |||| || | ||| ||||| |||||||||||||| |||||||| || ||||||| Sbjct 36155414 AGATCAGTCCCTGCTCATCAGGAGGAATTCCTTCCTTATCCTGAATCTTGGCCTTTACAT 36155473 Query 82738 TTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTA 82797 |||| || ||||| ||||| || || | ||| || ||||| || | | || || | Sbjct 36155474 TTTCTATTGTATCCGAGGGTTCAACCTCAAGAGTGATGGTCTTCCCCATAAGGGTTTTCA 36155533 Query 82798 CAAATATCTGCAT 82810 | || |||||||| Sbjct 36155534 CGAAAATCTGCAT 36155546 >seq7818 Length=84771923 Score = 98.7 bits (108), Expect = 2e-15 Identities = 116/157 (74%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 60155 TGGTGGTACTATATATCTAAAGGTATAGAATACTTAGATACGGTGTTTTTCATACTTAGG 60214 |||||||||| | |||||||||| | || || || || || |||||||| || || ||| Sbjct 77885893 TGGTGGTACTTTGTATCTAAAGGGGTTGAGTATTTGGACACAGTGTTTTTTATCCTGAGG 77885952 Query 60215 AAAAAGTTTAATCAGGTTAGTTTTTTACACGTATATCATCATTTTACTATGTTTACTTTA 60274 || || || ||||| ||| | || ||||||||||| | ||| |||||||| || Sbjct 77885953 AAGAAAAACAACCAGGTCTCTTTCCTTCATGTATATCATCACTGTACAATGTTTACATTG 77886012 Query 60275 GGATGGGTAGGCATTAAATGGTTTGCCGGAGGTCAAG 60311 | ||| | || ||||||||| | || || || |||| Sbjct 77886013 TGGTGGATTGGAATTAAATGGGTCGCAGGGGGACAAG 77886049 Score = 96.9 bits (106), Expect = 7e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||| | ||||| || ||||||||||| ||||| || ||||| ||| ||| |||||||| Sbjct 26785743 TCTCCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCACAAGGAATTTCTTCCTTA 26785684 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || |||||||| | ||| |||| || | ||| | ||||| || || | ||| || Sbjct 26785683 TCCTGAATCTTGACCTTTGCATTGTCTGTTGTAGCCGAGGGTTCAACCTCAAGAGTGATA 26785624 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 ||||| || || | || || || || ||||||||| Sbjct 26785623 GTCTTCCCGGTAAGGGTTTTCACGAAAATCTGCATT 26785588 >seq20 Length=2862499 Score = 96.9 bits (106), Expect = 7e-15 Identities = 151/215 (70%), Gaps = 1/215 (0%) Strand=Plus/Plus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || |||||||| || || |||||||| |||||||| | || || || Sbjct 2689019 CGAAGTACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGCCTGAGGGAGCGTGGCCA 2689078 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || || |||| || ||| | || || | || || || || || || || ||||| Sbjct 2689079 TCCTC-AGCTGTTGGCCTGCAGAAATCAGACACTGCTGGTCAGGCGGGATGCCCTCCTTG 2689137 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 ||||| || || ||||| ||||||| || | ||| || || || || | || ||| Sbjct 2689138 TCTTGGATTTTGGCTTTGACATTTTTAACAATGTCACGGGGCTCGACCTCGAGGGTGATC 2689197 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| ||| ||||| ||||| |||||||| Sbjct 2689198 GTCTTGCCCATCAGAGTCTTCACAAAGATCTGCAT 2689232 >seq7848 Length=18893393 Score = 91.5 bits (100), Expect = 3e-13 Identities = 73/88 (83%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 82662 AGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGA 82721 ||||| ||||| | ||||| ||||| || ||||| ||||| ||||||||||||||||| Sbjct 10044646 AGTTGCTTTCCCTCGAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCTTGG 10044705 Query 82722 ATCTTTGCTTTTACATTTTCAATCGTAT 82749 |||| || ||||||||||| || |||| Sbjct 10044706 GTCTTGGCCTTTACATTTTCTATTGTAT 10044733 Score = 86.0 bits (94), Expect = 1e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 82658 TTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATC 82717 ||| ||||| ||||| | ||||| ||||| || |||| ||||| |||||||||||||| Sbjct 10043300 TTCCAGTTGCTTTCCCTCGAAGATCAGTCTCTGCTGATTAGGAGGAATTCCTTCCTTATC 10043241 Query 82718 TTGAATCTTTGCTTTTACATTTTCAATCGTAT 82749 || |||| || ||||||||||| || |||| Sbjct 10043240 CTGGGTCTTGGCCTTTACATTTTCTATTGTAT 10043209 >seq7842 Length=42459490 Score = 91.5 bits (100), Expect = 3e-13 Identities = 94/122 (77%), Gaps = 1/122 (1%) Strand=Plus/Plus Query 82619 TTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAA 82678 |||||| || || || | ||||| | | | ||| ||||| ||||| || |||||||| Sbjct 2935315 TTCTTT-TGAATGCTACAGTCAGACTAAGTACCACCATCTTCCAGTTGCTTGCCAGCAAA 2935373 Query 82679 GATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATT 82738 ||| | |||||| ||||| |||| ||| |||||||||| || ||||| || ||| |||| Sbjct 2935374 GATCAATCTTTGCTGATCGGGAGAAATTTCTTCCTTATCCTGGATCTTGGCCTTTCCATT 2935433 Query 82739 TT 82740 || Sbjct 2935434 TT 2935435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981728172908608