Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq7823 131 2e-25 seq7846 125 7e-24 seq9 123 2e-23 seq7857 113 4e-20 seq7782 111 2e-19 seq7858 105 6e-18 seq7750 102 8e-17 seq20 102 8e-17 seq7828 96.9 3e-15 seq7767 84.2 2e-11 seq7870 82.4 7e-11 >seq7823 Length=12955506 Score = 131 bits (144), Expect = 2e-25 Identities = 150/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||||||||| || |||||||| | ||| | | | || || ||||||||||| Sbjct 3355522 GTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCA-TCTTCCAGCTGCTTGCC 3355464 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || ||||||||| ||||||||| || |||||||| || || || |||||| ||| Sbjct 3355463 TGCAAAAATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGGATCTTGGCCTT 3355404 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||||| |||||||||| || | ||||| ||| ||||||||||| || Sbjct 3355403 CACGTTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGT 3355344 Query 133643 TTTTACGAAAATCTGCATG 133661 || ||||| ||||||||| Sbjct 3355343 CTTCACGAAGATCTGCATG 3355325 Score = 96.9 bits (106), Expect = 3e-15 Identities = 126/172 (73%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||||||||| || |||||||| | ||| | | | || || |||||||||| Sbjct 3355295 GGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCA-TCTTCCAGCTGCTTGC 3355237 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||||| ||||||||| || |||||||| || || || |||||| || Sbjct 3355236 CTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGGATCTTGGCCT 3355177 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 | | | || | ||||| |||||||||| || | ||||| ||| ||||| Sbjct 3355176 TCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCC 3355125 >seq7846 Length=12828309 Score = 125 bits (138), Expect = 7e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||| ||||| || ||||| || || ||| | |||||| ||||| || || Sbjct 9163039 GTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGCCCGTCCTCCAGCTGTTTCCCG 9163098 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | || | || |||||||||||| |||||||| || ||||| |||||| |||| Sbjct 9163099 GCAAAGATCAACCTCTGCTGGTCGGGGGGGATGCCCTCTTTGTCCTGGATCTTCGCCTTG 9163158 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | ||| | ||||| |||||||||| || | ||||| ||| || ||||||| || Sbjct 9163159 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAAGGTC 9163218 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 9163219 TTCACGAAGATCTGCAT 9163235 >seq9 Length=2205763 Score = 123 bits (136), Expect = 2e-23 Identities = 157/210 (75%), Gaps = 6/210 (3%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||||||||||||||| ||||| || || || || | | | || || || Sbjct 1749346 AAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCA-TCTTCCAG 1749404 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| |||||||| ||| || ||||||||||| || |||||||| |||||||| ||| Sbjct 1749405 CTGTTTGCCCGCAAAAACCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTGGAT 1749464 Query 133574 CTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTC--CACGTCGACGGTGACGGTTTT 133630 ||| || |||| | ||||| ||||| ||||||| ||| || | ||||| ||| || Sbjct 1749465 -TTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCGACACCTCAAGGGTGATGGTCTT 1749523 Query 133631 GCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||| ||||| || || || || |||||||| Sbjct 1749524 GCCCGTCAGGGTCTTCACAAAGATCTGCAT 1749553 >seq7857 Length=43258702 Score = 113 bits (124), Expect = 4e-20 Identities = 146/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||||||||| || || ||||| | ||| | | | || || |||||||||| Sbjct 31543702 GGTCGACTCTTTCTGGATGTTATAATCAGAAAGAGTGCGGCCA-TCTTCCAGCTGCTTGC 31543760 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || ||||||||| ||||||||| || |||||||| || || || |||||| || Sbjct 31543761 CTGCAAAAATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGGATCTTGGCCT 31543820 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | |||| |||||||||| || | || || ||| |||||||| || | Sbjct 31543821 TCACATTTTCGATGATGTCACTGGGCTCCACCTCCAGGGGGATGGTCTTGCCGGTTAGGG 31543880 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 31543881 TCTTCACGAAGATCTGCAT 31543899 Score = 109 bits (120), Expect = 5e-19 Identities = 145/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||||||||| ||||||||||| | ||| | | | || || | |||||||| Sbjct 31543475 GTTGACTCTTTCTGGATATTGTAATCAGAAAGAGTGCGGCCA-TCTTCCATCTGCTTGCT 31543533 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || |||| ||||||||| || |||||||| || || | ||| || ||| Sbjct 31543534 GGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATATTGGATATTCGCCTT 31543593 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | |||| ||||| |||||||||| || | ||||| ||| |||||||| || || Sbjct 31543594 CACATTTTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTTAGGGT 31543653 Query 133643 TTTTACGAAAATCTGCATG 133661 || ||||| ||||||||| Sbjct 31543654 CTTCACGAAGATCTGCATG 31543672 >seq7782 Length=35566003 Score = 111 bits (122), Expect = 2e-19 Identities = 118/153 (77%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 133509 TCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCG 133568 || ||||| |||||||| |||| || ||||||||||| || |||||| | |||||||| Sbjct 14262558 TCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGGATGTCCTCCTTGTCT 14262617 Query 133569 GTGATCTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGT 133627 ||| ||| || |||| | ||||| ||||| ||||||| || |||| ||||| | | Sbjct 14262618 TGGAT-TTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGTT 14262676 Query 133628 TTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| ||||| || || || || |||||||| Sbjct 14262677 CTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 14262709 >seq7858 Length=29646629 Score = 105 bits (116), Expect = 6e-18 Identities = 145/199 (73%), Gaps = 3/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||||||||| || |||||||| | ||| | | | || || |||||||||| Sbjct 23743205 GTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCA-TCTTCCAGCTGCTTGCT 23743263 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCC-TTGTCGGTGATCTTTTGCT 133581 || | ||||||| || |||||| || |||||||| ||| || || |||||| || Sbjct 23743264 GGCAAAGATGAGCCTCTCCTGGTCAGGGGGGATGCCCTCCTTTATCCTGGATCTTGGCCT 23743323 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | ||||| |||||||||| || | ||||| ||| |||| |||||| | Sbjct 23743324 TCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCTGGTCAGGG 23743383 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || | ||| |||||||| Sbjct 23743384 TCTTCATGAAGATCTGCAT 23743402 >seq7750 Length=6501673 Score = 102 bits (112), Expect = 8e-17 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | |||||| ||| |||| |||||||| || || | | | || || ||| Sbjct 2770979 AAGTGCAGGGTGGATTCTCTCTGGATATTGTAGTCAGACAGTGCCGCCA--TCTTCCAGC 2771036 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 || | |||| | |||| || || || |||| || ||||||| |||||||| ||| Sbjct 2771037 TGTTCGCCCACAGAAATCAGATGCAGCAGGTCAGGCAGGATGCCCTCCTTGTCCTGGATG 2771096 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || |||| | |||| ||||| ||||||||||| |||| ||||| ||| ||||| Sbjct 2771097 TTGGCTTTGACATTCTCAGTGGTGTCAGTGGGCTCCACCTCGAGGGTGATGGTCTTGCCC 2771156 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATGGCT 133664 ||||| || || | || ||||||||| || Sbjct 2771157 GTCAGGGTCTTCTCAAAGATCTGCATGCCT 2771186 >seq20 Length=2862499 Score = 102 bits (112), Expect = 8e-17 Identities = 153/212 (72%), Gaps = 13/212 (6%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCC-----CATCGTGGACGAGTCCT 133509 || || | ||||||||||||||| ||||| || ||| | ||||| | |||| Sbjct 2689028 AAGTGCAGGGTGGACTCTTTCTGGATATT---ATAGCCTGAGGGAGCGTGGCC--ATCCT 2689082 Query 133510 CGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGG 133569 | ||||| | ||| || |||| || | ||||||||| || |||||||| |||||||| Sbjct 2689083 C-AGCTGTTGGCCTGCAGAAATCAGACACTGCTGGTCAGGCGGGATGCCCTCCTTGTCTT 2689141 Query 133570 TGATCTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTT 133628 ||| ||| || |||| | | ||| |||| |||||| || |||| ||||| || Sbjct 2689142 GGAT-TTTGGCTTTGACATTTTTAACAATGTCACGGGGCTCGACCTCGAGGGTGATCGTC 2689200 Query 133629 TTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| ||||||| || || || |||||||| Sbjct 2689201 TTGCCCATCAGAGTCTTCACAAAGATCTGCAT 2689232 >seq7828 Length=21597463 Score = 96.9 bits (106), Expect = 3e-15 Identities = 148/207 (71%), Gaps = 3/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | ||||||||||||||| ||||| || || || || | || || ||| Sbjct 10995414 AAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACAGCCATCTTCTAGC 10995355 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 | |||||||| || | || | ||||||||| || |||||||| |||| ||| ||| Sbjct 10995354 TATTTGCCCGCAAAAGTCAGACACTGCTGGTCAGGCGGGATGCCCTCCTGGTCTTGGAT- 10995296 Query 133575 TTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| || |||| | |||| ||||| ||||||| || || | ||||| ||| ||||| Sbjct 10995295 TTTGGCTTTGACATTCTCAGTGGTGTCACTGGGCTCGACCTC-AGGGTGATGGTCTTGCC 10995237 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || | || || || |||||||| Sbjct 10995236 TGTGAGGGCCTTCACAAAGATCTGCAT 10995210 >seq7767 Length=50048226 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| || || || ||||| || || ||| | | | || || || |||||||| Sbjct 33066760 GTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCA-TCTTCCAGTTGCTTGCC 33066818 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || || | |||||| || ||||| || |||||||| || ||||| ||| Sbjct 33066819 AGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGAATCTTGGCCTT 33066878 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | || || | ||| || || |||| ||||| ||| || || || || || Sbjct 33066879 TACATTTTCTATTGTATCCGAGGGATCAACCTCGAGGGTGATGGTCTTCCCCGTAAGGGT 33066938 Query 133643 TTTTACGAAAATCTGCAT 133660 ||| |||||||||||||| Sbjct 33066939 TTTCACGAAAATCTGCAT 33066956 >seq7870 Length=10551609 Score = 82.4 bits (90), Expect = 7e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 148866 TACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTG 148925 |||||||| || || | |||||| ||||||||||||||| |||| ||||| || ||| Sbjct 10326680 TACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCCAGGTTCTGCTGGTTG 10326621 Query 148926 CTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGG 148963 ||||| | || || | || ||||| ||||||||||| Sbjct 10326620 CTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGG 10326583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483373231393280