Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_024696.1
Length=180800
Score E
Sequences producing significant alignments: (Bits) Value
seq7788 271 9e-68
seq7816 206 3e-48
seq7818 138 1e-27
seq7819 100 3e-16
>seq7788
Length=6094078
Score = 271 bits (300), Expect = 9e-68
Identities = 625/932 (67%), Gaps = 17/932 (2%)
Strand=Plus/Minus
Query 162059 CCAGGGACTTATGTCGGAGATACTCGTCTAGACACTGGACCGCGAACACGTCTCGTTCCT 162118
|||||| ||||| | |||| ||| || | |||||||| || || | ||| ||
Sbjct 1359122 CCAGGGCTTTATGCCTCAGATGCTCATCCAAACACTGGATGGCAAAGAGGTCAATGTCTG 1359063
Query 162119 CATCGAACTTGTTCGCGAACAGGTGATGCGAGTTCTTCAATATCCAATTAAGATCCCCCG 162178
|| |||||||| || |||| ||| ||| | | | | ||||| || | ||||| |
Sbjct 1359062 TGTCAAACTTGTTGGCAAACAAGTGGTGCTTG--CGT-AGCATCCAGTTCAAGTCCCCTG 1359006
Query 162179 ATCCGAACACGCACACGGACCGCACGTGCACGCCGCTGCACGGCGGATACAGGGCCCCAT 162238
||||||||||||||| || ||||| || || || ||||| || ||||| |||| || |
Sbjct 1359005 CTCCGAACACGCACACAGAACGCACATGGACCCCACTGCAGGGTGGATAGGGGGCACCCT 1358946
Query 162239 CGTCCACATCCCCCTCGTAGTATTGCCACTTAACGAACCTAGTGATAGCCTGCATGTCGG 162298
| |||||||| ||| | || ||||| || || ||||| | || || |||||||| |
Sbjct 1358945 TGGAAACATCCCCTTCGAAATACTGCCATTTGACAAACCTTGCAATTGCATGCATGTCAG 1358886
Query 162299 AGGTGTCGTACTTGTACACTGACGGCACGGCTCCAGGAACACCCGGCAGTCTCTGTAGAG 162358
| |||| ||||| | | | | || | || || ||| | || | ||||| | ||
Sbjct 1358885 ACATGTCATACTTCTGGCTTAAGGACAGTGAGCCTGGGACATCAGGGATCCTCTGAATAG 1358826
Query 162359 TAGCCCACAGGTGTTCGTCTGGACTATACGTCTCCTTCGACCACTCCATGAACTCCCTGA 162418
| ||||| || | || || || || || || || || | ||||||||| |||| ||
Sbjct 1358825 TGGCCCAGAGATACTCATCCGGGCTGTATGTATCTTTAGCCCACTCCATAAACTTTTGGA 1358766
Query 162419 CCGTTTTATCGTATAGAATGTAAGAGACGTAGGACCTGGTCACAATAAAGTACGCGCTAC 162478
||| || | ||| | || ||||| ||| | || | ||| || || || |
Sbjct 1358765 TTTTTTCATTCTCTAGCACATACCCCACGTACATCCTACTGACCACAAAATAGGCACTGC 1358706
Query 162479 CAGAAAACACGGGTATGCGTATAGGAGGGGGCTCTTTGTCTTGACCCGTGTTGACTACCA 162538
| ||||||| ||| | | ||||||| || |||||| |||||||| | |
Sbjct 1358705 CTGAAAACAGAGGTGTTTCGAGAGGAGGGTGCATTTTGTCAGTCCCCGTGTTCGTCAGC- 1358647
Query 162539 TTCCCTCTACGACCACGTGTCT----CTTCCTCCACCTGGCCATCTTACTGGTAGACGGG 162594
||||| || || || ||| | ||| ||||||| | | ||| ||| | |
Sbjct 1358646 TTCCCATTA--ACAAC-TGTATAATGCTTTTTCCACCTTTCTTTTTTATTGGATGGCATT 1358590
Query 162595 TGTTCGGTCTCTAGACTGTTACGACCCCCCAAGGCCTTCAGCTGACGCACCATCTCTAGA 162654
|| || ||||| |||| |||| | | ||| |||| || || || || ||
Sbjct 1358589 CTCTCAGTTTCTAGGTTGTTTTCACCCATTAGCGACTTGAGCTTCCGGACAATTTCCAGG 1358530
Query 162655 TTGGTCTTAAGGGGAAAGTCGGTGCCGCAGAGATTAATAACATATTTCCACTTAACGCTG 162714
||||| |||| |||||| || | ||||| ||||| || | || ||||| | | ||
Sbjct 1358529 TTGGTTTTAATGGGAAAATCCATACCGCAAAGATTTATCAAGTACTTCCAATCTGCACTC 1358470
Query 162715 AGTCCGTACAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCGACTCCACGACGCGTAC 162774
| | ||| || || || | ||||| || || ||||| || |||||||| || || |||
Sbjct 1358469 ATCCTGTAGAGGTCTTGCATGCAGTTGAGGTCAGCCTGAACCCGACTCCATGAGGCATAC 1358410
Query 162775 ACGACGCTCTCCAACCTAGTGGCGACAAAGACATTGTCGAAACACGAAACTATCCCCATC 162834
|| || ||||||| | | |||| ||||||||||| ||| || || | || || |||
Sbjct 1358409 ACCACACTCTCCAGCTGACTGGCCACAAAGACATTACTGAAGCAGGACGCGATGCCAATC 1358350
Query 162835 A---CGGCCAGTGAGAACATCGGGTCCGCTTTCCTATCTACGTGTACGCAGTATAGATTC 162891
| |||||| || | ||| || | || || || ||||| | |||||| | ||||
Sbjct 1358349 ACCGCGGCCAAAAAGGA-ATC--CTCTGACTTTCTGTCCACGTGAATGCAGTAGAAATTC 1358293
Query 162892 TGAGGGGCGTAGATGGCCCTCAGTAATCTCTCGAACATCTCTATCTTATGGTGTACCACG 162951
||||| |||||||| ||||| | || || | ||| || || || || || |||||
Sbjct 1358292 TGAGGCATATAGATGGCTCTCAGGAGCCTGTCAAGCATTTCAATTTTGTGATGAACCACT 1358233
Query 162952 ATAGAATACGCTATGGGGAACTCAGCCTCCTC 162983
| |||||| |||||||| ||||| |||| ||
Sbjct 1358232 AGAGAATATGCTATGGGAAACTCTTCCTCTTC 1358201
>seq7816
Length=41823926
Score = 206 bits (228), Expect = 3e-48
Identities = 222/294 (76%), Gaps = 0/294 (0%)
Strand=Plus/Plus
Query 171771 CATAGAGTGTCAGACAGGTCTTACCCGATATTTTTCCGGACCCAAAAGTATTAAACAAAC 171830
|| |||| | || ||||| | || || || || || || ||||||||||| || | |
Sbjct 30774229 CAGAGAGGCTGAGGCAGGTTGTTCCTGAGATCTTCCCAGAACCAAAAGTATTGAAGAGGC 30774288
Query 171831 ACATAAAACAGCCTTCGTCCTCCACGGTGGTGTTCCAAAAAGTCAATGTAGAATTTCTGA 171890
|| | |||| ||||| ||||||| |||||||||||| || || | || || || |||
Sbjct 30774289 ACTTGTAACACCCTTCATCCTCCAGGGTGGTGTTCCAGAAGGTAATGGTTGAGTTCTTGA 30774348
Query 171891 GTCCGAGTTGCGTAATGTTCACCCGGTCCTTGTACGGAGGCTGGACGACAACACCGTGAT 171950
|| | || || || ||||| | | ||| || || | ||||||||| ||||| || || |
Sbjct 30774349 GTTCCAGCTGGGTGATGTTTATCTTGTCTTTATAGGCAGGCTGGACCACAACCCCATGGT 30774408
Query 171951 TCTCGCTGAACGTGGCCATGTTTTCGGGGCTCGTAGCCTTTATCTTCTGCCACGTTACTA 172010
||| |||||| ||| |||||||||| ||||| |||||| || |||||||| || || |
Sbjct 30774409 TCTTGCTGAAGGTGACCATGTTTTCTGGGCTAACAGCCTTGATTTTCTGCCATGTCACAA 30774468
Query 172011 TTAAAACTTCTTTGTCGGTTTGAAGAGAGCATCTTAAAGAAGCAGGTGTGTTCA 172064
| || ||||| | | |||| |||||||||||||| ||||||||||||||||
Sbjct 30774469 TCAAGACTTCCTCGGAATTTTGCAGAGAGCATCTTAAGGAAGCAGGTGTGTTCA 30774522
Score = 114 bits (126), Expect = 1e-20
Identities = 177/251 (71%), Gaps = 9/251 (4%)
Strand=Plus/Plus
Query 171503 ACAGTTTGTCTGATGTCTGTTACAGTCCCCAAGTGTAAGACTTTGCATATCACCTCCTCG 171562
|||||||| ||| | || ||| |||||| ||| | || | ||| | ||||||||
Sbjct 30771646 ACAGTTTGCATGACGCTGGTCACATTCCCCAGGTGCAGCACCTGGCAGACCACCTCCT-- 30771703
Query 171563 TTTCCCACTTGACTTTTAGGATCTTTTACTTGAAGAATGCTAGTAACAGATGTAGTCCCG 171622
| |||||||||| || || ||||| | || |||| ||| || ||||| || |||||
Sbjct 30771704 -TCCCCACTTGACGCTTGGGGTCTTTGATCTGGAGAACGCTCGTGACAGACGTGGTCCCA 30771762
Query 171623 TTACGATGTA---GAACGGTTTTAGTACTATTTTCTATTCCGGATCCGGCAACTTTCCAA 171679
|| | || | |||| | |||||| ||||| || || || || | || |||||
Sbjct 30771763 TTGGGGTGAAAGAGAACC---TCAGTACTGTTTTCAATCCCTGACCCAGATACCTTCCAG 30771819
Query 171680 AATATAACAGGAGCTGGTCTAGCAGTAGCAGAGCAAGTTATGTTTAATCCATCTTCGAAG 171739
| || ||||| ||||| | ||| | ||||||||||| || |||| |||||||||
Sbjct 30771820 GAGATCACAGGGGCTGGGCGGGCATTGGCAGAGCAAGTGATATTTAGGTGGTCTTCGAAG 30771879
Query 171740 AACTCATAGTG 171750
|| | ||||||
Sbjct 30771880 AATTTATAGTG 30771890
>seq7818
Length=84771923
Score = 138 bits (152), Expect = 1e-27
Identities = 448/682 (66%), Gaps = 19/682 (3%)
Strand=Plus/Plus
Query 176887 TCCAGTTAAAGTATTGAAGATAAAGGGTGACGTTTTTATCGATGGCGTTGAGGTGCGAGG 176946
||||||||||||| ||| || | | |||||| || | | || || | | ||
Sbjct 63725451 TCCAGTTAAAGTAACTAAGGTATAACTTATTGTTTTTGTCAACTTCTTTCAGATACTTGG 63725510
Query 176947 CCAGTTCTATAGGGGACGTGTAGTCGTTCACGTGAATGAAAGCGTCTCCCGGGACGTAAT 177006
| || || | || || | || || | ||| |||||||| | ||| | || | ||||
Sbjct 63725511 CTAGCTCACTGGGAGAGTTATAATCTTCCACATGAATGAATGAATCTGCTGGAATATAAT 63725570
Query 177007 TTTCGTAATTCTCTCTCGATGTTCCGAGTACTATGGGTACCGCACCTGCCATAAGAGATC 177066
| || ||||| || || |||| || || || | |||||| | || || | || ||
Sbjct 63725571 TCTCATAATTTTCCCTAGATGGCCCCAGAACAACGGGTACAGAGCCAGCTAGAAAAGCAT 63725630
Query 177067 GGTAGAGTTTTTCGGTAATATAGTCCCTGTGTACGGAGTTCTCAAACGCGAGATAGAATT 177126
|||||| ||||| || || || || |||| | ||||| ||||| | ||||| ||||
Sbjct 63725631 TGTAGAGCTTTTCTGTGATGTAATCTTTGTGGATTGAGTTTTCAAAAGAAAGATAAAATT 63725690
Query 177127 TACAGGAAGATA--GTAGCGGGATGAAGTCATCATCGGGTATATAATCTCCTACTACGTT 177184
| || | ||||| ||| || || || | | ||| | ||| ||||| | | | |
Sbjct 63725691 TGCAAGTAGATATGGTA--GGAATCAAATTTTTATCATTCACATACTCTCCAAATGCTTG 63725748
Query 177185 CCCGTATACATGTATATCTATGTGTTTACTGAGCTCTAGGTAGTATCTCGA-TCTCACGT 177243
||| || ||| || || ||| ||| || ||||| ||| || || || || | |
Sbjct 63725749 CCCATAGGTATGGATTTCAATGCTTTTGCTTAGCTCATTGTAATA-CTTGACCCTTGCAT 63725807
Query 177244 GGTCGTTGTTCCAATTGCTGACGACCCAGCAAACTAACTTGCTCTTTGC-GGGAACGGGA 177302
| || |||||| || || || |||||||| |||||||| |||||||| || ||
Sbjct 63725808 GCTCAGGGTTCCAGTTACTTACAACCCAGCACACTAACTT-CTCTTTGCTTGGCAC---- 63725862
Query 177303 TTC-GATACTAATGCAGTGTCT-CTGAGCGTTAGTGATCCATAGGGCACGTGAATATCCG 177360
||| | || || | || | | || | ||| | | || || ||||| || ||||| |
Sbjct 63725863 TTCAAACACGAA-GGGGTTTGTGCTCACCGTCAAGAAGCCGTAAGGCACTTGGATATCTG 63725921
Query 177361 AGTCGCGTCTGTACGTTAACGTGAGATTGAAAAGGTTTTCTATAC--CTTGTTTGAAGGG 177418
|||| || | ||| || | || | ||||| |||| ||| || | || |||| |||
Sbjct 63725922 AGTCACGGCGGTAAGTCAGAGTCAAGTTGAACAGGTGTTCGATGCCACTCTTTTG--GGG 63725979
Query 177419 GCTGTTACTGGGCGATTCTAAGTTCATCCATATCCACTTTTGAAAGGTTGGTCTGGGTTC 177478
||| | | || ||||| || |||||||| ||||| || || |||| ||| || | |
Sbjct 63725980 CGTGTGAGTTGGTGATTCCAAATTCATCCAAATCCATTTCTGGAAGGGTGGCCTAGCCTG 63726039
Query 177479 CGTAGGTAGAGTATAAGGATCTATACTTATCTCTCTGTGGTGAAAGACTACGGCATTGGC 177538
| |||| || |||| ||| || |||| |||||| | | || |||| |
Sbjct 63726040 CTGTGGTAAGTTAGTCAGATCCCAACTGATGTCTCGGTGGTGGATCAGAACTGCATGAGA 63726099
Query 177539 TTTGTAATAAACAGATCTGTCT 177560
||||| || | ||| | ||||
Sbjct 63726100 TTTGTTGTATAGAGAACGGTCT 63726121
>seq7819
Length=28646420
Score = 100 bits (110), Expect = 3e-16
Identities = 227/336 (68%), Gaps = 8/336 (2%)
Strand=Plus/Plus
Query 162643 ACCATCTCTAGATTGGTCTTAAGGGGAAAGTCGGTGCCGCAGAGATTAATAACATATTTC 162702
|||||||| ||||||||| | |||||||| || || || ||| | | ||| ||
Sbjct 16270963 ACCATCTCAGCATTGGTCTTTATAGGAAAGTCCGTCCCACATGTATTCAGTAAGTATCTC 16271022
Query 162703 CACTTAACGCTGAG-TCCGTA-CAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCGAC 162760
||| || |||| || | | || |||| | |||||| || || ||||| || |
Sbjct 16271023 CACGGCAC--TGAGCTCTGGAGCAAGTCCTCCATACAGTTTAGGTCAGCCTGCACCCTGG 16271080
Query 162761 TCCACGACGCGTACACGACGCTCTCCAACCTAGTGGCGACAAAGACATTGTCGAAACACG 162820
||| || || || || || | ||||| || |||| | |||||||| ||| ||||
Sbjct 16271081 ACCAGGAGGCATAAACCACCCGAACCAACTTACTGGCTATGAAGACATTTGGGAAGCACG 16271140
Query 162821 AAACTATCCCCATCACGGCCAG--TGAGAACATCGGGTCCGCTTTCCTATCTACGTGTAC 162878
| || ||| || | || ||| ||| | || || | |||| ||| || || ||
Sbjct 16271141 ACACAATCGCCTTGACTGCCTCCTTGAAAGTTTCTGGG--GATTTCTCATCCACATGGAC 16271198
Query 162879 GCAGTATAGATTCTGAGGGGCGTAGATGGCCCTCAGTAATCTCTCGAACATCTCTATCTT 162938
||||||| ||||||||||| || | || | ||| | ||| || || |||| |||||
Sbjct 16271199 ACAGTATATGTTCTGAGGGGCATACAAAGCTCGCAGCAGTCTTTCAAAGTTCTCGATCTT 16271258
Query 162939 ATGGTGTACCACGATAGAATACGCTATGGGGAACTC 162974
| || ||||| ||||| || || || ||||| ||
Sbjct 16271259 CTCATGGACCACCATAGAGTATGCAATAGGGAAGTC 16271294
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578375082291200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |