Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq7846 116 2e-21
seq9 91.5 1e-13
seq7823 84.2 1e-11
>seq7846
Length=12828309
Score = 116 bits (128), Expect = 2e-21
Identities = 167/233 (72%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
|||| || ||||| || | ||||| || |||||| ||| || || |||||||| || |
Sbjct 9163007 CACCTCCCCTCAAGCGCAGGACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCTG 9163066
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| || ||||| |||| |||| ||||| |||||||| ||||| | |||||| || | |
Sbjct 9163067 ACAGGGTGCGCCCGTCCTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCGGGGG 9163126
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | || |||||||| || ||| || | | | || | |||||| || | |||
Sbjct 9163127 GGATGCCCTCTTTGTCCTGGATCTTCGCCTTGA-CGTTCTCGATGGTGTCACTGGGCTCC 9163185
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752
|| || | ||||| || ||||| || || || || || ||||||||||| ||
Sbjct 9163186 ACCTCCAGGGTGATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCATCGT 9163238
>seq9
Length=2205763
Score = 91.5 bits (100), Expect = 1e-13
Identities = 150/213 (70%), Gaps = 4/213 (2%)
Strand=Plus/Plus
Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599
|||||| || || ||| |||||| || || || || || || || || || | || ||
Sbjct 1749342 CACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCATCTTC 1749401
Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659
|| ||||| || ||||||| || ||||||||| || |||| | || || |||||
Sbjct 1749402 CAGCTGTTTGCCCGCAAAAACCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTG 1749461
Query 33660 AATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTC--CACGTCAACCGTGATCGT 33716
||||| ||| | ||| ||| |||||| || | || ||| |||| ||||| ||
Sbjct 1749462 GATTTTGGCTTTGA-CATTCTCAATGGTGTCACTGGGCTCGACACCTCAAGGGTGATGGT 1749520
Query 33717 TTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| || || | || || ||||||||||||||
Sbjct 1749521 CTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 1749553
>seq7823
Length=12955506
Score = 84.2 bits (92), Expect = 1e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| |||| ||| | |||| || ||||| |||||| || ||||||||||| ||
Sbjct 3355552 CCACCCCTCAGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAA 3355493
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| | || |||| || || || |||||||| | | |||||| || | ||
Sbjct 3355492 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAAATGAGCCTCTGCTGGTCAGGGGGG 3355433
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || ||||| || || || ||| || | || | |||||| || | |||||
Sbjct 3355432 ATGCCCTCTTTATCTTGGATCTTGGCCTTC-ACGTTTTCGATGGTGTCACTGGGCTCCAC 3355374
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | ||||| || || || || | || || || |||||||||||
Sbjct 3355373 CTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 3355326
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328672464138240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |