Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq7767 123 6e-23 seq7828 120 7e-22 seq7858 114 3e-20 seq7857 102 2e-16 seq7823 100 7e-16 seq7764 87.8 4e-12 >seq7767 Length=50048226 Score = 123 bits (136), Expect = 6e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || || || || ||||| | || || || || || ||| | ||| Sbjct 33066941 AAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGATCCCTCGGATACAATAGAAAAT 33066882 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| |||||||| || || ||||||||| || || || ||||| ||||| Sbjct 33066881 GTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAGCAGAGACTGATCTTT 33066822 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| ||||||||||| | |||||| | || |||||| | || || |||||| Sbjct 33066821 GCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTACAACATTCAAAAGGAGTCT 33066762 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||||| ||||| | ||||||||| Sbjct 33066761 ACTCTTCATCTTGTGTGGAGACTTCG 33066736 Score = 95.1 bits (104), Expect = 3e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||||||| | ||||| |||||||||||||| || || | || ||||||| |||||| Sbjct 33066736 CGAAGTCTCCACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTG 33066795 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAG 204846 | |||||||||||| ||||| || || ||||| || Sbjct 33066796 CGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAG 33066830 >seq7828 Length=21597463 Score = 120 bits (132), Expect = 7e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || || || || |||||| | || || ||| || || ||| | ||| Sbjct 14213571 AAAACCCTTACGGGGAAGACCATCACTCTCGAGGTTGAACCCTCGGATACAATAGAAAAT 14213512 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 ||||| |||||||| | || ||||||||| || || || ||||| ||||| Sbjct 14213511 ATAAAGGCCAAGATTCAGAATAAGGAAGGAATTCCTCCTGATCAGCAGAGACTGATCTTT 14213452 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| ||||||||||| | ||||| | || |||||| | || || ||||| Sbjct 14213451 GCTGGCAAGCAACTGGAAGATGGACGTCCTTTGTCTGACTACAACATTCAAAAGGAGTCC 14213392 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||||| ||||| ||||||||||| Sbjct 14213391 ACTCTTCATCTTGTGTTGAGACTTCG 14213366 Score = 91.5 bits (100), Expect = 3e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||||||||| ||||| |||||||| ||||| || || | || ||||||| ||||| Sbjct 14213366 CGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGGA 14213425 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAG 204846 | |||||||||||| ||||| || || ||||| || Sbjct 14213426 CGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAG 14213460 >seq7858 Length=29646629 Score = 114 bits (126), Expect = 3e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||| || || || ||||| | || ||| || || ||| | ||| Sbjct 12424946 AAAACCCTCACGGGGAAGACCATCACCCTCGAGCCTGAACCCTCGGATACAATAGAAAAT 12424887 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 ||| || |||||||| || || ||||||||| || || || ||||| ||| | Sbjct 12424886 GTACAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAGCAGAGACTGATCGTT 12424827 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| ||||| ||||| | |||||| | || |||||| | || || |||||| Sbjct 12424826 GCTGGCAAGCAACTGGAAAATGGATGCACTTTGTCTGACTACAACATTCAAAAGGAGTCT 12424767 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||||| ||||| ||||||||||| Sbjct 12424766 ACTCTTCATCTTGTGTTGAGACTTCG 12424741 Score = 91.5 bits (100), Expect = 3e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||||||||| ||||| |||||||||||||| || || | || ||||||| |||||| Sbjct 12424741 CGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTG 12424800 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAG 204846 | ||||| |||||| ||||| || || | ||| || Sbjct 12424801 CATCCATTTTCCAGTTGCTTGCCAGCAACGATCAG 12424835 >seq7857 Length=43258702 Score = 102 bits (112), Expect = 2e-16 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || | || || || |||||| | || | ||| || || ||| | || Sbjct 24177970 AAAACTCTTATGGGGAAGACCATCACTCTCGAGGCTGAACCCTCGGATACAATACAAAAT 24178029 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| |||||||| || || ||||||||| || || || ||| | ||||| Sbjct 24178030 GTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAGCAGAGATTGATCTTT 24178089 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| ||||||||||| | ||| || | || |||||| || || ||||| Sbjct 24178090 GCTGGCAAGCAACTGGAAGATGGACGCACTCTGTCTGACTACAACACTCAAAAGGAGTCC 24178149 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||||| ||||| || |||||||| Sbjct 24178150 ACTCTTCATCTTGTGTTAAGACTTCG 24178175 Score = 91.5 bits (100), Expect = 3e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || ||||| |||| ||||| |||||| | ||| Sbjct 31543656 AAGACCCTAACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGACACCATTGAAAAT 31543597 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| || || ||| | ||||| || || || ||| || || |||||||| Sbjct 31543596 GTGAAGGCGAATATCCAATATAAAGAGGGCATCCCCCCTGACCAGCAGAGGCTTATCTTT 31543537 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||| | |||||| |||||||||| | ||| | | |||||||| ||||||||||||| Sbjct 31543536 GCCAGCAAGCAGATGGAAGATGGCCGCACTCTTTCTGATTACAATATCCAGAAAGAGTCA 31543477 Query 206365 ACTCTTCACCTTGTT 206379 ||||| ||||| ||| Sbjct 31543476 ACTCTCCACCTGGTT 31543462 Score = 84.2 bits (92), Expect = 5e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 204763 AACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTC 204822 ||| ||||| ||||| ||||||||||||| ||| || |||| | ||| | |||||||| Sbjct 31543462 AACCAGGTGGAGAGTTGACTCTTTCTGGATATTGTAATCAGAAAGAGTGCGGCCATCTTC 31543521 Query 204823 CAGCTGCTTTCCGGCGAAGATAAGCC 204848 || |||||| | ||| |||||||||| Sbjct 31543522 CATCTGCTTGCTGGCAAAGATAAGCC 31543547 >seq7823 Length=12955506 Score = 100 bits (110), Expect = 7e-16 Identities = 139/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || ||||| |||| ||||| |||||| ||||| Sbjct 3355341 AAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGACACCATCGAAAAC 3355400 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| ||||| ||||| || || || ||| || || || || || Sbjct 3355401 GTGAAGGCCAAGATCCAAGATAAAGAGGGCATCCCCCCTGACCAGCAGAGGCTCATTTTT 3355460 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| |||||||||| | ||| | | ||||||||| ||||||||||||| Sbjct 3355461 GCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAACATCCAGAAAGAGTCA 3355520 Query 206365 ACTCTTCACCTTGTT 206379 ||||| ||||| ||| Sbjct 3355521 ACTCTCCACCTGGTT 3355535 Score = 95.1 bits (104), Expect = 3e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 206197 GGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAAG 206256 || || || ||||| |||| ||||| |||||| ||||| || ||| ||| Sbjct 3355125 GGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGACACCATCGAAAATGTGAAGGCCAAG 3355184 Query 206257 ATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAG 206316 || ||||| ||||| || || || ||| || || || ||||| || || |||||| Sbjct 3355185 ATCCAAGATAAAGAGGGCATCCCCCCTGACCAGCAGAGGCTCATCTTTGCAGGCAAGCAG 3355244 Query 206317 TTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACCTT 206376 |||||||||| | ||| | | ||||||||| ||||||||||||| || || ||||| Sbjct 3355245 CTGGAAGATGGCCGCACTCTTTCTGATTACAACATCCAGAAAGAGTCGACCCTGCACCTG 3355304 Query 206377 GT 206378 || Sbjct 3355305 GT 3355306 >seq7764 Length=47977530 Score = 87.8 bits (96), Expect = 4e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 206269 GAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGA 206328 ||||||||| || || || ||||| |||||| | || ||||| |||||| |||| Sbjct 16767688 GAAGGAATTCCTCCCGATCAGCAGAGACTGATCTTCACTGGCAAGCAACTGGAAGGTGGA 16767747 Query 206329 AGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTT 206388 |||||| | || |||||| | || || |||||||||||||| || || ||||||||| Sbjct 16767748 CATACTTTGTCTGACTACAACATTCAAAAGGAGTCTACTCTTCATCTCGTGTTGAGACTT 16767807 Query 206389 C 206389 | Sbjct 16767808 C 16767808 Score = 84.2 bits (92), Expect = 5e-11 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 204753 GAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCC 204812 |||||||||| || || |||||||||||||| || || | || ||||||| |||||| Sbjct 16767808 GAAGTCTCAACACGAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTAT 16767749 Query 204813 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAG 204846 |||| ||||||| ||||| || | |||||| || Sbjct 16767748 GTCCACCTTCCAGTTGCTTGCCAGTGAAGATCAG 16767715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181701601554112