Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq7767 123 6e-23
seq7828 120 7e-22
seq7858 114 3e-20
seq7857 102 2e-16
seq7823 100 7e-16
seq7764 87.8 4e-12
>seq7767
Length=50048226
Score = 123 bits (136), Expect = 6e-23
Identities = 151/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| || || || || || ||||| | || || || || || ||| | |||
Sbjct 33066941 AAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGATCCCTCGGATACAATAGAAAAT 33066882
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|||||| |||||||| || || ||||||||| || || || ||||| |||||
Sbjct 33066881 GTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAGCAGAGACTGATCTTT 33066822
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || ||||| ||||||||||| | |||||| | || |||||| | || || ||||||
Sbjct 33066821 GCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTACAACATTCAAAAGGAGTCT 33066762
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390
|||||||| ||||| | |||||||||
Sbjct 33066761 ACTCTTCATCTTGTGTGGAGACTTCG 33066736
Score = 95.1 bits (104), Expect = 3e-14
Identities = 78/95 (82%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811
||||||||| | ||||| |||||||||||||| || || | || ||||||| ||||||
Sbjct 33066736 CGAAGTCTCCACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTG 33066795
Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAG 204846
| |||||||||||| ||||| || || ||||| ||
Sbjct 33066796 CGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAG 33066830
>seq7828
Length=21597463
Score = 120 bits (132), Expect = 7e-22
Identities = 150/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| || || || || || |||||| | || || ||| || || ||| | |||
Sbjct 14213571 AAAACCCTTACGGGGAAGACCATCACTCTCGAGGTTGAACCCTCGGATACAATAGAAAAT 14213512
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
||||| |||||||| | || ||||||||| || || || ||||| |||||
Sbjct 14213511 ATAAAGGCCAAGATTCAGAATAAGGAAGGAATTCCTCCTGATCAGCAGAGACTGATCTTT 14213452
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || ||||| ||||||||||| | ||||| | || |||||| | || || |||||
Sbjct 14213451 GCTGGCAAGCAACTGGAAGATGGACGTCCTTTGTCTGACTACAACATTCAAAAGGAGTCC 14213392
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390
|||||||| ||||| |||||||||||
Sbjct 14213391 ACTCTTCATCTTGTGTTGAGACTTCG 14213366
Score = 91.5 bits (100), Expect = 3e-13
Identities = 77/95 (81%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811
||||||||||| ||||| |||||||| ||||| || || | || ||||||| |||||
Sbjct 14213366 CGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGGA 14213425
Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAG 204846
| |||||||||||| ||||| || || ||||| ||
Sbjct 14213426 CGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAG 14213460
>seq7858
Length=29646629
Score = 114 bits (126), Expect = 3e-20
Identities = 149/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| ||||| || || || ||||| | || ||| || || ||| | |||
Sbjct 12424946 AAAACCCTCACGGGGAAGACCATCACCCTCGAGCCTGAACCCTCGGATACAATAGAAAAT 12424887
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
||| || |||||||| || || ||||||||| || || || ||||| ||| |
Sbjct 12424886 GTACAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAGCAGAGACTGATCGTT 12424827
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || ||||| ||||| ||||| | |||||| | || |||||| | || || ||||||
Sbjct 12424826 GCTGGCAAGCAACTGGAAAATGGATGCACTTTGTCTGACTACAACATTCAAAAGGAGTCT 12424767
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390
|||||||| ||||| |||||||||||
Sbjct 12424766 ACTCTTCATCTTGTGTTGAGACTTCG 12424741
Score = 91.5 bits (100), Expect = 3e-13
Identities = 77/95 (81%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811
||||||||||| ||||| |||||||||||||| || || | || ||||||| ||||||
Sbjct 12424741 CGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTG 12424800
Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAG 204846
| ||||| |||||| ||||| || || | ||| ||
Sbjct 12424801 CATCCATTTTCCAGTTGCTTGCCAGCAACGATCAG 12424835
>seq7857
Length=43258702
Score = 102 bits (112), Expect = 2e-16
Identities = 146/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| || | || || || |||||| | || | ||| || || ||| | ||
Sbjct 24177970 AAAACTCTTATGGGGAAGACCATCACTCTCGAGGCTGAACCCTCGGATACAATACAAAAT 24178029
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|||||| |||||||| || || ||||||||| || || || ||| | |||||
Sbjct 24178030 GTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAGCAGAGATTGATCTTT 24178089
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || ||||| ||||||||||| | ||| || | || |||||| || || |||||
Sbjct 24178090 GCTGGCAAGCAACTGGAAGATGGACGCACTCTGTCTGACTACAACACTCAAAAGGAGTCC 24178149
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390
|||||||| ||||| || ||||||||
Sbjct 24178150 ACTCTTCATCTTGTGTTAAGACTTCG 24178175
Score = 91.5 bits (100), Expect = 3e-13
Identities = 137/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || ||||| |||| ||||| |||||| | |||
Sbjct 31543656 AAGACCCTAACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGACACCATTGAAAAT 31543597
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| || || ||| | ||||| || || || ||| || || ||||||||
Sbjct 31543596 GTGAAGGCGAATATCCAATATAAAGAGGGCATCCCCCCTGACCAGCAGAGGCTTATCTTT 31543537
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||| | |||||| |||||||||| | ||| | | |||||||| |||||||||||||
Sbjct 31543536 GCCAGCAAGCAGATGGAAGATGGCCGCACTCTTTCTGATTACAATATCCAGAAAGAGTCA 31543477
Query 206365 ACTCTTCACCTTGTT 206379
||||| ||||| |||
Sbjct 31543476 ACTCTCCACCTGGTT 31543462
Score = 84.2 bits (92), Expect = 5e-11
Identities = 70/86 (81%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 204763 AACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTC 204822
||| ||||| ||||| ||||||||||||| ||| || |||| | ||| | ||||||||
Sbjct 31543462 AACCAGGTGGAGAGTTGACTCTTTCTGGATATTGTAATCAGAAAGAGTGCGGCCATCTTC 31543521
Query 204823 CAGCTGCTTTCCGGCGAAGATAAGCC 204848
|| |||||| | ||| ||||||||||
Sbjct 31543522 CATCTGCTTGCTGGCAAAGATAAGCC 31543547
>seq7823
Length=12955506
Score = 100 bits (110), Expect = 7e-16
Identities = 139/195 (71%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || ||||| |||| ||||| |||||| |||||
Sbjct 3355341 AAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGACACCATCGAAAAC 3355400
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| ||||| ||||| || || || ||| || || || || ||
Sbjct 3355401 GTGAAGGCCAAGATCCAAGATAAAGAGGGCATCCCCCCTGACCAGCAGAGGCTCATTTTT 3355460
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || |||||| |||||||||| | ||| | | ||||||||| |||||||||||||
Sbjct 3355461 GCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAACATCCAGAAAGAGTCA 3355520
Query 206365 ACTCTTCACCTTGTT 206379
||||| ||||| |||
Sbjct 3355521 ACTCTCCACCTGGTT 3355535
Score = 95.1 bits (104), Expect = 3e-14
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 206197 GGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAAG 206256
|| || || ||||| |||| ||||| |||||| ||||| || ||| |||
Sbjct 3355125 GGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGACACCATCGAAAATGTGAAGGCCAAG 3355184
Query 206257 ATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAG 206316
|| ||||| ||||| || || || ||| || || || ||||| || || ||||||
Sbjct 3355185 ATCCAAGATAAAGAGGGCATCCCCCCTGACCAGCAGAGGCTCATCTTTGCAGGCAAGCAG 3355244
Query 206317 TTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACCTT 206376
|||||||||| | ||| | | ||||||||| ||||||||||||| || || |||||
Sbjct 3355245 CTGGAAGATGGCCGCACTCTTTCTGATTACAACATCCAGAAAGAGTCGACCCTGCACCTG 3355304
Query 206377 GT 206378
||
Sbjct 3355305 GT 3355306
>seq7764
Length=47977530
Score = 87.8 bits (96), Expect = 4e-12
Identities = 92/121 (76%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 206269 GAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGA 206328
||||||||| || || || ||||| |||||| | || ||||| |||||| ||||
Sbjct 16767688 GAAGGAATTCCTCCCGATCAGCAGAGACTGATCTTCACTGGCAAGCAACTGGAAGGTGGA 16767747
Query 206329 AGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTT 206388
|||||| | || |||||| | || || |||||||||||||| || || |||||||||
Sbjct 16767748 CATACTTTGTCTGACTACAACATTCAAAAGGAGTCTACTCTTCATCTCGTGTTGAGACTT 16767807
Query 206389 C 206389
|
Sbjct 16767808 C 16767808
Score = 84.2 bits (92), Expect = 5e-11
Identities = 75/94 (80%), Gaps = 0/94 (0%)
Strand=Plus/Minus
Query 204753 GAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCC 204812
|||||||||| || || |||||||||||||| || || | || ||||||| ||||||
Sbjct 16767808 GAAGTCTCAACACGAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTAT 16767749
Query 204813 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAG 204846
|||| ||||||| ||||| || | |||||| ||
Sbjct 16767748 GTCCACCTTCCAGTTGCTTGCCAGTGAAGATCAG 16767715
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181701601554112
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |