Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq7870 91.5 1e-13 seq7767 89.7 5e-13 seq7828 84.2 2e-11 >seq7870 Length=10551609 Score = 91.5 bits (100), Expect = 1e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 147505 TACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTG 147564 |||| || ||||| | |||||||||||||||||| || ||||| || ||||| ||| Sbjct 10326680 TACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCCAGGTTCTGCTGGTTG 10326621 Query 147565 CTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGG 147602 || |||||||| || | |||||| ||||||||||||| Sbjct 10326620 CTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGG 10326583 >seq7767 Length=50048226 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| ||||||||||||||||| || || || |||||| || || || || | | Sbjct 33066763 GACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATCTTCCAGTTGCTTGCCAGCA 33066822 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | ||| ||||| ||||| || ||||| ||||| ||| || || | Sbjct 33066823 AAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGAATCTTGGCCTTTACA 33066882 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | ||||| | || || || |||| || | || || || || || ||||| Sbjct 33066883 TTTTCTATTGTATCCGAGGGATCAACCTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTC 33066942 Query 132110 ATGAAAATCTGCAT 132123 | |||||||||||| Sbjct 33066943 ACGAAAATCTGCAT 33066956 >seq7828 Length=21597463 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| ||||||||||||||||| || | ||| |||||| || || || || | | Sbjct 14213393 GACTCCTTTTGAATGTTGTAGTCAGACAAAGGACGTCCATCTTCCAGTTGCTTGCCAGCA 14213452 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | ||| ||||| ||||| || ||||| |||| ||| || || | Sbjct 14213453 AAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATTCTGAATCTTGGCCTTTATA 14213512 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | ||||| | || || || |||| || | || || || || || ||||| Sbjct 14213513 TTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGATGGTCTTCCCCGTAAGGGTTTTC 14213572 Query 132110 ATGAAAATCTGCAT 132123 | |||||||||||| Sbjct 14213573 ACGAAAATCTGCAT 14213586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476564301457920