Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_025963.1 Length=139981 Score E Sequences producing significant alignments: (Bits) Value seq7759 87.8 2e-12 >seq7759 Length=36627259 Score = 87.8 bits (96), Expect = 2e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 133104 TGGGGTGCCAAGCACTCTCGGAGATGATCCAGTTCTACCTGGAAGAAGTCATGCCGCAGG 133163 |||| |||||||| | |||||||||||||||||||||||||| || || ||||| |||| Sbjct 5668611 TGGGTTGCCAAGCCTTGTCGGAGATGATCCAGTTCTACCTGGAGGAGGTGATGCCCCAGG 5668552 Query 133164 CAGAGAATCACGGACCAA 133181 | ||||| |||| |||| Sbjct 5668551 CTGAGAACCACGACCCAA 5668534 Score = 86.0 bits (94), Expect = 6e-12 Identities = 72/87 (83%), Gaps = 1/87 (1%) Strand=Plus/Minus Query 133311 AGCTCCAGGAACGCGGTGTGTACAAGGCCATGAGCGAGTTCGACATCTTCATCAACTACA 133370 ||||||| || | ||||| ||||| |||||||| ||||| ||||||||||||||||||| Sbjct 5666301 AGCTCCAAGAGAGAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 5666242 Query 133371 TAGAGACATATACCACCATGAA-ATGA 133396 |||| || || | || ||||| |||| Sbjct 5666241 TAGAAACCTACATGACAATGAAGATGA 5666215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447767135377920